data_5VCW # _model_server_result.job_id W8F4t9g7fm_HdtGQoY8hoA _model_server_result.datetime_utc '2024-11-24 13:46:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5VCW # _exptl.entry_id 5VCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.27 _cell.angle_gamma 90 _cell.entry_id 5VCW _cell.length_a 50.51 _cell.length_b 112.9 _cell.length_c 72.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VCW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1 B,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 357 n n S O2 SO4 doub 358 n n S O3 SO4 sing 359 n n S O4 SO4 sing 360 n n # _atom_sites.entry_id 5VCW _atom_sites.fract_transf_matrix[1][1] 0.019798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006922 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 93J A 1 401 1 93J LIG . D 3 SO4 A 1 402 3 SO4 SO4 . E 4 EDO A 1 403 1 EDO EDO . F 4 EDO A 1 404 3 EDO EDO . G 4 EDO A 1 405 4 EDO EDO . H 2 93J B 1 401 2 93J LIG . I 3 SO4 B 1 402 1 SO4 SO4 . J 3 SO4 B 1 403 2 SO4 SO4 . K 3 SO4 B 1 404 4 SO4 SO4 . L 3 SO4 B 1 405 5 SO4 SO4 . M 4 EDO B 1 406 2 EDO EDO . N 5 HOH A 1 501 19 HOH HOH . N 5 HOH A 2 502 52 HOH HOH . N 5 HOH A 3 503 38 HOH HOH . N 5 HOH A 4 504 45 HOH HOH . N 5 HOH A 5 505 17 HOH HOH . N 5 HOH A 6 506 6 HOH HOH . N 5 HOH A 7 507 16 HOH HOH . N 5 HOH A 8 508 33 HOH HOH . N 5 HOH A 9 509 7 HOH HOH . N 5 HOH A 10 510 2 HOH HOH . N 5 HOH A 11 511 34 HOH HOH . N 5 HOH A 12 512 15 HOH HOH . N 5 HOH A 13 513 18 HOH HOH . N 5 HOH A 14 514 3 HOH HOH . N 5 HOH A 15 515 40 HOH HOH . N 5 HOH A 16 516 37 HOH HOH . N 5 HOH A 17 517 4 HOH HOH . N 5 HOH A 18 518 47 HOH HOH . N 5 HOH A 19 519 31 HOH HOH . N 5 HOH A 20 520 36 HOH HOH . N 5 HOH A 21 521 46 HOH HOH . N 5 HOH A 22 522 42 HOH HOH . N 5 HOH A 23 523 41 HOH HOH . N 5 HOH A 24 524 11 HOH HOH . N 5 HOH A 25 525 44 HOH HOH . O 5 HOH B 1 501 10 HOH HOH . O 5 HOH B 2 502 32 HOH HOH . O 5 HOH B 3 503 12 HOH HOH . O 5 HOH B 4 504 26 HOH HOH . O 5 HOH B 5 505 39 HOH HOH . O 5 HOH B 6 506 28 HOH HOH . O 5 HOH B 7 507 1 HOH HOH . O 5 HOH B 8 508 5 HOH HOH . O 5 HOH B 9 509 51 HOH HOH . O 5 HOH B 10 510 50 HOH HOH . O 5 HOH B 11 511 23 HOH HOH . O 5 HOH B 12 512 20 HOH HOH . O 5 HOH B 13 513 9 HOH HOH . O 5 HOH B 14 514 8 HOH HOH . O 5 HOH B 15 515 24 HOH HOH . O 5 HOH B 16 516 14 HOH HOH . O 5 HOH B 17 517 30 HOH HOH . O 5 HOH B 18 518 25 HOH HOH . O 5 HOH B 19 519 48 HOH HOH . O 5 HOH B 20 520 21 HOH HOH . O 5 HOH B 21 521 22 HOH HOH . O 5 HOH B 22 522 49 HOH HOH . O 5 HOH B 23 523 27 HOH HOH . O 5 HOH B 24 524 29 HOH HOH . O 5 HOH B 25 525 13 HOH HOH . O 5 HOH B 26 526 35 HOH HOH . O 5 HOH B 27 527 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 4.887 17.902 6.898 1 94.02 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . D 3 5.623 16.694 6.522 1 96.91 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . D 3 4.761 18.791 5.743 1 98.63 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . D 3 5.627 18.608 7.943 1 99.06 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . D 3 3.554 17.534 7.383 1 77.13 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 371 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #