data_5VH0
#
_model_server_result.job_id            3oCWtUmpybuKhutoEhhzpw 
_model_server_result.datetime_utc      '2024-11-28 22:11:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vh0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":101}' 
#
_entry.id    5VH0 
#
_exptl.entry_id    5VH0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              202.251 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            pyrene 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VH0 
_cell.length_a            35.023 
_cell.length_b            76.995 
_cell.length_c            35.099 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VH0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        3 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,J,K 1 1,2 
C,D,H,I,L,M 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,y,-z -1 0 0 0 1 0 0 0 -1 70.046 0 0 
3 'crystal symmetry operation' 2_856 -x+3,y,-z+1 -1 0 0 0 1 0 0 0 -1 105.069 0 35.099 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C16 H10' 
_chem_comp.formula_weight    202.251 
_chem_comp.id                8P0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              pyrene 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C14 8P0 doub 1 n y 
C01 C02 8P0 sing 2 n y 
C14 C13 8P0 sing 3 n y 
C02 C03 8P0 doub 4 n y 
C13 C15 8P0 doub 5 n y 
C13 C12 8P0 sing 6 n y 
C03 C12 8P0 sing 7 n y 
C03 C04 8P0 sing 8 n y 
C15 C16 8P0 sing 9 n y 
C12 C11 8P0 doub 10 n y 
C04 C05 8P0 doub 11 n y 
C16 C10 8P0 doub 12 n y 
C11 C10 8P0 sing 13 n y 
C11 C06 8P0 sing 14 n y 
C05 C06 8P0 sing 15 n y 
C10 C09 8P0 sing 16 n y 
C06 C07 8P0 doub 17 n y 
C09 C08 8P0 doub 18 n y 
C07 C08 8P0 sing 19 n y 
C01 H011 8P0 sing 20 n n 
C02 H021 8P0 sing 21 n n 
C04 H041 8P0 sing 22 n n 
C05 H051 8P0 sing 23 n n 
C07 H071 8P0 sing 24 n n 
C08 H081 8P0 sing 25 n n 
C09 H091 8P0 sing 26 n n 
C14 H141 8P0 sing 27 n n 
C15 H151 8P0 sing 28 n n 
C16 H161 8P0 sing 29 n n 
#
_atom_sites.entry_id                     5VH0 
_atom_sites.fract_transf_matrix[1][1]    0.028553 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012988 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028491 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 8P0 A 1 101 1 8P0 8P0 . 
F 2 8P0 A 1 102 4 8P0 8P0 . 
G 3 EDO A 1 103 1 EDO EDO . 
H 2 8P0 C 1 101 2 8P0 8P0 . 
I 2 8P0 D 1 101 3 8P0 8P0 . 
J 4 HOH A 1 201 29 HOH HOH . 
J 4 HOH A 2 202 63 HOH HOH . 
J 4 HOH A 3 203 14 HOH HOH . 
J 4 HOH A 4 204 65 HOH HOH . 
J 4 HOH A 5 205 94 HOH HOH . 
J 4 HOH A 6 206 1 HOH HOH . 
J 4 HOH A 7 207 15 HOH HOH . 
J 4 HOH A 8 208 23 HOH HOH . 
J 4 HOH A 9 209 3 HOH HOH . 
J 4 HOH A 10 210 16 HOH HOH . 
J 4 HOH A 11 211 51 HOH HOH . 
J 4 HOH A 12 212 106 HOH HOH . 
J 4 HOH A 13 213 36 HOH HOH . 
J 4 HOH A 14 214 43 HOH HOH . 
J 4 HOH A 15 215 121 HOH HOH . 
J 4 HOH A 16 216 73 HOH HOH . 
J 4 HOH A 17 217 41 HOH HOH . 
J 4 HOH A 18 218 75 HOH HOH . 
J 4 HOH A 19 219 93 HOH HOH . 
J 4 HOH A 20 220 56 HOH HOH . 
J 4 HOH A 21 221 38 HOH HOH . 
J 4 HOH A 22 222 118 HOH HOH . 
K 4 HOH B 1 101 85 HOH HOH . 
K 4 HOH B 2 102 30 HOH HOH . 
K 4 HOH B 3 103 34 HOH HOH . 
K 4 HOH B 4 104 81 HOH HOH . 
K 4 HOH B 5 105 49 HOH HOH . 
K 4 HOH B 6 106 35 HOH HOH . 
K 4 HOH B 7 107 32 HOH HOH . 
K 4 HOH B 8 108 4 HOH HOH . 
K 4 HOH B 9 109 109 HOH HOH . 
K 4 HOH B 10 110 2 HOH HOH . 
K 4 HOH B 11 111 70 HOH HOH . 
K 4 HOH B 12 112 10 HOH HOH . 
K 4 HOH B 13 113 13 HOH HOH . 
K 4 HOH B 14 114 59 HOH HOH . 
K 4 HOH B 15 115 67 HOH HOH . 
K 4 HOH B 16 116 39 HOH HOH . 
K 4 HOH B 17 117 105 HOH HOH . 
K 4 HOH B 18 118 110 HOH HOH . 
K 4 HOH B 19 119 87 HOH HOH . 
K 4 HOH B 20 120 116 HOH HOH . 
K 4 HOH B 21 121 101 HOH HOH . 
K 4 HOH B 22 122 111 HOH HOH . 
K 4 HOH B 23 123 86 HOH HOH . 
K 4 HOH B 24 124 24 HOH HOH . 
K 4 HOH B 25 125 17 HOH HOH . 
K 4 HOH B 26 126 33 HOH HOH . 
K 4 HOH B 27 127 72 HOH HOH . 
K 4 HOH B 28 128 100 HOH HOH . 
K 4 HOH B 29 129 113 HOH HOH . 
K 4 HOH B 30 130 61 HOH HOH . 
L 4 HOH C 1 201 21 HOH HOH . 
L 4 HOH C 2 202 79 HOH HOH . 
L 4 HOH C 3 203 47 HOH HOH . 
L 4 HOH C 4 204 28 HOH HOH . 
L 4 HOH C 5 205 9 HOH HOH . 
L 4 HOH C 6 206 12 HOH HOH . 
L 4 HOH C 7 207 84 HOH HOH . 
L 4 HOH C 8 208 25 HOH HOH . 
L 4 HOH C 9 209 76 HOH HOH . 
L 4 HOH C 10 210 37 HOH HOH . 
L 4 HOH C 11 211 27 HOH HOH . 
L 4 HOH C 12 212 57 HOH HOH . 
L 4 HOH C 13 213 89 HOH HOH . 
L 4 HOH C 14 214 7 HOH HOH . 
L 4 HOH C 15 215 117 HOH HOH . 
L 4 HOH C 16 216 53 HOH HOH . 
L 4 HOH C 17 217 42 HOH HOH . 
L 4 HOH C 18 218 96 HOH HOH . 
L 4 HOH C 19 219 120 HOH HOH . 
L 4 HOH C 20 220 119 HOH HOH . 
L 4 HOH C 21 221 71 HOH HOH . 
L 4 HOH C 22 222 22 HOH HOH . 
L 4 HOH C 23 223 115 HOH HOH . 
L 4 HOH C 24 224 90 HOH HOH . 
L 4 HOH C 25 225 8 HOH HOH . 
L 4 HOH C 26 226 69 HOH HOH . 
L 4 HOH C 27 227 122 HOH HOH . 
M 4 HOH D 1 201 104 HOH HOH . 
M 4 HOH D 2 202 11 HOH HOH . 
M 4 HOH D 3 203 82 HOH HOH . 
M 4 HOH D 4 204 20 HOH HOH . 
M 4 HOH D 5 205 40 HOH HOH . 
M 4 HOH D 6 206 91 HOH HOH . 
M 4 HOH D 7 207 45 HOH HOH . 
M 4 HOH D 8 208 18 HOH HOH . 
M 4 HOH D 9 209 31 HOH HOH . 
M 4 HOH D 10 210 5 HOH HOH . 
M 4 HOH D 11 211 50 HOH HOH . 
M 4 HOH D 12 212 52 HOH HOH . 
M 4 HOH D 13 213 44 HOH HOH . 
M 4 HOH D 14 214 97 HOH HOH . 
M 4 HOH D 15 215 80 HOH HOH . 
M 4 HOH D 16 216 46 HOH HOH . 
M 4 HOH D 17 217 19 HOH HOH . 
M 4 HOH D 18 218 55 HOH HOH . 
M 4 HOH D 19 219 88 HOH HOH . 
M 4 HOH D 20 220 26 HOH HOH . 
M 4 HOH D 21 221 77 HOH HOH . 
M 4 HOH D 22 222 64 HOH HOH . 
M 4 HOH D 23 223 78 HOH HOH . 
M 4 HOH D 24 224 48 HOH HOH . 
M 4 HOH D 25 225 68 HOH HOH . 
M 4 HOH D 26 226 6 HOH HOH . 
M 4 HOH D 27 227 112 HOH HOH . 
M 4 HOH D 28 228 83 HOH HOH . 
M 4 HOH D 29 229 74 HOH HOH . 
M 4 HOH D 30 230 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 8P0 . . . H 2 55.781 39.94 18.808 0.45 37.54 ? C01 8P0 101 C 1 
HETATM 2 C C02 8P0 . . . H 2 54.717 39.943 19.688 0.45 37.5 ? C02 8P0 101 C 1 
HETATM 3 C C03 8P0 . . . H 2 53.423 39.943 19.209 0.45 37.93 ? C03 8P0 101 C 1 
HETATM 4 C C04 8P0 . . . H 2 52.273 39.945 20.07 0.45 37.7 ? C04 8P0 101 C 1 
HETATM 5 C C05 8P0 . . . H 2 51.024 39.947 19.572 0.45 37.72 ? C05 8P0 101 C 1 
HETATM 6 C C06 8P0 . . . H 2 50.768 39.946 18.155 0.45 37.88 ? C06 8P0 101 C 1 
HETATM 7 C C07 8P0 . . . H 2 49.502 39.947 17.636 0.45 37.4 ? C07 8P0 101 C 1 
HETATM 8 C C08 8P0 . . . H 2 49.298 39.947 16.27 0.45 37.53 ? C08 8P0 101 C 1 
HETATM 9 C C09 8P0 . . . H 2 50.364 39.947 15.403 0.45 37.5 ? C09 8P0 101 C 1 
HETATM 10 C C10 8P0 . . . H 2 51.65 39.945 15.901 0.45 37.93 ? C10 8P0 101 C 1 
HETATM 11 C C11 8P0 . . . H 2 51.871 39.946 17.292 0.45 37.56 ? C11 8P0 101 C 1 
HETATM 12 C C12 8P0 . . . H 2 53.195 39.945 17.818 0.45 37.56 ? C12 8P0 101 C 1 
HETATM 13 C C13 8P0 . . . H 2 54.29 39.942 16.947 0.45 37.88 ? C13 8P0 101 C 1 
HETATM 14 C C14 8P0 . . . H 2 55.562 39.941 17.45 0.45 37.4 ? C14 8P0 101 C 1 
HETATM 15 C C15 8P0 . . . H 2 54.039 39.944 15.53 0.45 37.72 ? C15 8P0 101 C 1 
HETATM 16 C C16 8P0 . . . H 2 52.788 39.944 15.035 0.45 37.7 ? C16 8P0 101 C 1 
HETATM 17 H H011 8P0 . . . H 2 56.653 39.94 19.129 0.45 45.04 ? H011 8P0 101 C 1 
HETATM 18 H H021 8P0 . . . H 2 54.91 39.942 20.597 0.45 45 ? H021 8P0 101 C 1 
HETATM 19 H H041 8P0 . . . H 2 52.402 39.945 20.99 0.45 45.24 ? H041 8P0 101 C 1 
HETATM 20 H H051 8P0 . . . H 2 50.294 39.947 20.147 0.45 45.26 ? H051 8P0 101 C 1 
HETATM 21 H H071 8P0 . . . H 2 48.75 39.948 18.182 0.45 44.88 ? H071 8P0 101 C 1 
HETATM 22 H H081 8P0 . . . H 2 48.432 39.949 15.931 0.45 45.04 ? H081 8P0 101 C 1 
HETATM 23 H H091 8P0 . . . H 2 50.195 39.947 14.49 0.45 45 ? H091 8P0 101 C 1 
HETATM 24 H H141 8P0 . . . H 2 56.3 39.941 16.886 0.45 44.88 ? H141 8P0 101 C 1 
HETATM 25 H H151 8P0 . . . H 2 54.766 39.942 14.952 0.45 45.26 ? H151 8P0 101 C 1 
HETATM 26 H H161 8P0 . . . H 2 52.652 39.944 14.116 0.45 45.24 ? H161 8P0 101 C 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#