data_5VIL # _model_server_result.job_id Ec8MAS-lvwLAkebSkrf8NA _model_server_result.datetime_utc '2025-02-05 17:04:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":4000}' # _entry.id 5VIL # _exptl.entry_id 5VIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 416.454 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methoxy-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-5-sulfamoylbenzamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.82 _cell.angle_gamma 90 _cell.entry_id 5VIL _cell.length_a 40.54 _cell.length_b 132.09 _cell.length_c 135.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,I,J,N 2 1 C,K,O 3 1 D,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C18 H20 N6 O4 S' _chem_comp.formula_weight 416.454 _chem_comp.id 9E1 _chem_comp.mon_nstd_flag . _chem_comp.name 2-methoxy-N-{6-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]pyridin-2-yl}-5-sulfamoylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 N2 9E1 sing 1 n y N3 C5 9E1 doub 2 n y C4 N2 9E1 doub 3 n y C4 N1 9E1 sing 4 n y C7 C6 9E1 doub 5 n y C7 C8 9E1 sing 6 n y C6 C5 9E1 sing 7 n n C6 N4 9E1 sing 8 n y C9 C8 9E1 doub 9 n y C9 C10 9E1 sing 10 n y C13 C12 9E1 doub 11 n y C13 C14 9E1 sing 12 n y N5 C10 9E1 sing 13 n n N5 C11 9E1 sing 14 n n C18 O2 9E1 sing 15 n n C16 C15 9E1 sing 16 n y C16 C17 9E1 doub 17 n y C1 C2 9E1 sing 18 n n C2 C3 9E1 sing 19 n n C2 N1 9E1 sing 20 n n N1 C5 9E1 sing 21 n y C10 N4 9E1 doub 22 n y C11 O1 9E1 doub 23 n n C11 C12 9E1 sing 24 n n C12 C17 9E1 sing 25 n y C14 C15 9E1 doub 26 n y C14 S1 9E1 sing 27 n n C17 O2 9E1 sing 28 n n S1 O3 9E1 doub 29 n n S1 O4 9E1 doub 30 n n S1 N6 9E1 sing 31 n n C4 H8 9E1 sing 32 n n C7 H9 9E1 sing 33 n n C9 H11 9E1 sing 34 n n C13 H13 9E1 sing 35 n n C8 H10 9E1 sing 36 n n N5 H12 9E1 sing 37 n n C18 H18 9E1 sing 38 n n C18 H16 9E1 sing 39 n n C18 H17 9E1 sing 40 n n C16 H15 9E1 sing 41 n n C1 H1 9E1 sing 42 n n C1 H3 9E1 sing 43 n n C1 H2 9E1 sing 44 n n C2 H4 9E1 sing 45 n n C3 H6 9E1 sing 46 n n C3 H7 9E1 sing 47 n n C3 H5 9E1 sing 48 n n C15 H14 9E1 sing 49 n n N6 H20 9E1 sing 50 n n N6 H19 9E1 sing 51 n n # _atom_sites.entry_id 5VIL _atom_sites.fract_transf_matrix[1][1] 0.024667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001215 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 9E1 A 1 1001 4000 9E1 PFE . F 3 DMS A 1 1002 3 DMS DMS . G 2 9E1 B 1 1001 4000 9E1 PFE . H 3 DMS B 1 1002 1 DMS DMS . I 3 DMS B 1 1003 2 DMS DMS . J 3 DMS B 1 1004 4 DMS DMS . K 2 9E1 C 1 4000 4000 9E1 PFE . L 2 9E1 D 1 4000 4000 9E1 PFE . M 4 HOH A 1 1101 53 HOH HOH . M 4 HOH A 2 1102 23 HOH HOH . M 4 HOH A 3 1103 152 HOH HOH . M 4 HOH A 4 1104 27 HOH HOH . M 4 HOH A 5 1105 115 HOH HOH . M 4 HOH A 6 1106 37 HOH HOH . M 4 HOH A 7 1107 26 HOH HOH . M 4 HOH A 8 1108 16 HOH HOH . M 4 HOH A 9 1109 36 HOH HOH . M 4 HOH A 10 1110 21 HOH HOH . M 4 HOH A 11 1111 117 HOH HOH . M 4 HOH A 12 1112 134 HOH HOH . M 4 HOH A 13 1113 138 HOH HOH . M 4 HOH A 14 1114 17 HOH HOH . M 4 HOH A 15 1115 41 HOH HOH . M 4 HOH A 16 1116 95 HOH HOH . M 4 HOH A 17 1117 56 HOH HOH . M 4 HOH A 18 1118 111 HOH HOH . M 4 HOH A 19 1119 140 HOH HOH . M 4 HOH A 20 1120 22 HOH HOH . M 4 HOH A 21 1121 121 HOH HOH . M 4 HOH A 22 1122 18 HOH HOH . M 4 HOH A 23 1123 153 HOH HOH . M 4 HOH A 24 1124 62 HOH HOH . M 4 HOH A 25 1125 100 HOH HOH . M 4 HOH A 26 1126 28 HOH HOH . M 4 HOH A 27 1127 96 HOH HOH . M 4 HOH A 28 1128 49 HOH HOH . M 4 HOH A 29 1129 14 HOH HOH . M 4 HOH A 30 1130 145 HOH HOH . M 4 HOH A 31 1131 113 HOH HOH . M 4 HOH A 32 1132 128 HOH HOH . M 4 HOH A 33 1133 144 HOH HOH . M 4 HOH A 34 1134 74 HOH HOH . M 4 HOH A 35 1135 110 HOH HOH . M 4 HOH A 36 1136 130 HOH HOH . M 4 HOH A 37 1137 132 HOH HOH . M 4 HOH A 38 1138 141 HOH HOH . M 4 HOH A 39 1139 11 HOH HOH . M 4 HOH A 40 1140 40 HOH HOH . M 4 HOH A 41 1141 60 HOH HOH . M 4 HOH A 42 1142 57 HOH HOH . M 4 HOH A 43 1143 133 HOH HOH . M 4 HOH A 44 1144 142 HOH HOH . M 4 HOH A 45 1145 68 HOH HOH . M 4 HOH A 46 1146 77 HOH HOH . M 4 HOH A 47 1147 33 HOH HOH . M 4 HOH A 48 1148 19 HOH HOH . M 4 HOH A 49 1149 135 HOH HOH . M 4 HOH A 50 1150 126 HOH HOH . M 4 HOH A 51 1151 32 HOH HOH . M 4 HOH A 52 1152 86 HOH HOH . N 4 HOH B 1 1101 80 HOH HOH . N 4 HOH B 2 1102 12 HOH HOH . N 4 HOH B 3 1103 8 HOH HOH . N 4 HOH B 4 1104 81 HOH HOH . N 4 HOH B 5 1105 45 HOH HOH . N 4 HOH B 6 1106 65 HOH HOH . N 4 HOH B 7 1107 30 HOH HOH . N 4 HOH B 8 1108 149 HOH HOH . N 4 HOH B 9 1109 114 HOH HOH . N 4 HOH B 10 1110 88 HOH HOH . N 4 HOH B 11 1111 39 HOH HOH . N 4 HOH B 12 1112 148 HOH HOH . N 4 HOH B 13 1113 120 HOH HOH . N 4 HOH B 14 1114 104 HOH HOH . N 4 HOH B 15 1115 50 HOH HOH . N 4 HOH B 16 1116 9 HOH HOH . N 4 HOH B 17 1117 109 HOH HOH . N 4 HOH B 18 1118 59 HOH HOH . N 4 HOH B 19 1119 119 HOH HOH . N 4 HOH B 20 1120 71 HOH HOH . N 4 HOH B 21 1121 42 HOH HOH . N 4 HOH B 22 1122 83 HOH HOH . N 4 HOH B 23 1123 105 HOH HOH . N 4 HOH B 24 1124 85 HOH HOH . N 4 HOH B 25 1125 143 HOH HOH . N 4 HOH B 26 1126 93 HOH HOH . N 4 HOH B 27 1127 47 HOH HOH . N 4 HOH B 28 1128 46 HOH HOH . N 4 HOH B 29 1129 35 HOH HOH . N 4 HOH B 30 1130 108 HOH HOH . N 4 HOH B 31 1131 112 HOH HOH . N 4 HOH B 32 1132 97 HOH HOH . N 4 HOH B 33 1133 31 HOH HOH . N 4 HOH B 34 1134 92 HOH HOH . N 4 HOH B 35 1135 78 HOH HOH . N 4 HOH B 36 1136 89 HOH HOH . N 4 HOH B 37 1137 25 HOH HOH . N 4 HOH B 38 1138 102 HOH HOH . N 4 HOH B 39 1139 52 HOH HOH . N 4 HOH B 40 1140 129 HOH HOH . N 4 HOH B 41 1141 44 HOH HOH . N 4 HOH B 42 1142 87 HOH HOH . N 4 HOH B 43 1143 61 HOH HOH . N 4 HOH B 44 1144 90 HOH HOH . N 4 HOH B 45 1145 43 HOH HOH . N 4 HOH B 46 1146 10 HOH HOH . N 4 HOH B 47 1147 3 HOH HOH . N 4 HOH B 48 1148 94 HOH HOH . N 4 HOH B 49 1149 55 HOH HOH . N 4 HOH B 50 1150 20 HOH HOH . N 4 HOH B 51 1151 124 HOH HOH . N 4 HOH B 52 1152 13 HOH HOH . N 4 HOH B 53 1153 63 HOH HOH . N 4 HOH B 54 1154 58 HOH HOH . N 4 HOH B 55 1155 137 HOH HOH . N 4 HOH B 56 1156 66 HOH HOH . N 4 HOH B 57 1157 127 HOH HOH . N 4 HOH B 58 1158 116 HOH HOH . N 4 HOH B 59 1159 76 HOH HOH . N 4 HOH B 60 1160 106 HOH HOH . N 4 HOH B 61 1161 70 HOH HOH . N 4 HOH B 62 1162 72 HOH HOH . N 4 HOH B 63 1163 139 HOH HOH . O 4 HOH C 1 4101 38 HOH HOH . O 4 HOH C 2 4102 103 HOH HOH . O 4 HOH C 3 4103 151 HOH HOH . O 4 HOH C 4 4104 101 HOH HOH . O 4 HOH C 5 4105 84 HOH HOH . O 4 HOH C 6 4106 64 HOH HOH . O 4 HOH C 7 4107 79 HOH HOH . O 4 HOH C 8 4108 125 HOH HOH . O 4 HOH C 9 4109 82 HOH HOH . P 4 HOH D 1 4101 69 HOH HOH . P 4 HOH D 2 4102 131 HOH HOH . P 4 HOH D 3 4103 54 HOH HOH . P 4 HOH D 4 4104 29 HOH HOH . P 4 HOH D 5 4105 98 HOH HOH . P 4 HOH D 6 4106 99 HOH HOH . P 4 HOH D 7 4107 73 HOH HOH . P 4 HOH D 8 4108 150 HOH HOH . P 4 HOH D 9 4109 24 HOH HOH . P 4 HOH D 10 4110 75 HOH HOH . P 4 HOH D 11 4111 91 HOH HOH . P 4 HOH D 12 4112 123 HOH HOH . P 4 HOH D 13 4113 107 HOH HOH . P 4 HOH D 14 4114 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 9E1 . . . L 2 22.945 53.082 4.742 1 131.85 ? N3 9E1 4000 D 1 HETATM 2 C C4 9E1 . . . L 2 23.529 53.676 2.705 1 131.42 ? C4 9E1 4000 D 1 HETATM 3 N N2 9E1 . . . L 2 23.254 54.125 3.967 1 135.43 ? N2 9E1 4000 D 1 HETATM 4 C C7 9E1 . . . L 2 22.028 50.456 5.694 1 124.95 ? C7 9E1 4000 D 1 HETATM 5 C C6 9E1 . . . L 2 22.796 50.6 4.531 1 124.51 ? C6 9E1 4000 D 1 HETATM 6 C C9 9E1 . . . L 2 22.512 48.096 5.626 1 117.34 ? C9 9E1 4000 D 1 HETATM 7 C C13 9E1 . . . L 2 24.263 43.767 3.006 1 105.77 ? C13 9E1 4000 D 1 HETATM 8 C C8 9E1 . . . L 2 21.904 49.184 6.237 1 120.5 ? C8 9E1 4000 D 1 HETATM 9 N N5 9E1 . . . L 2 23.899 47.309 3.715 1 113.54 ? N5 9E1 4000 D 1 HETATM 10 C C18 9E1 . . . L 2 24.285 47.171 -0.325 1 107.36 ? C18 9E1 4000 D 1 HETATM 11 C C16 9E1 . . . L 2 25.019 44.569 0.453 1 105.78 ? C16 9E1 4000 D 1 HETATM 12 C C1 9E1 . . . L 2 23.06 52.123 0.246 1 120.48 ? C1 9E1 4000 D 1 HETATM 13 C C2 9E1 . . . L 2 23.557 51.412 1.509 1 119.51 ? C2 9E1 4000 D 1 HETATM 14 C C3 9E1 . . . L 2 25.035 51.041 1.358 1 117.96 ? C3 9E1 4000 D 1 HETATM 15 N N1 9E1 . . . L 2 23.377 52.286 2.684 1 125.24 ? N1 9E1 4000 D 1 HETATM 16 C C5 9E1 . . . L 2 23.02 51.934 3.992 1 126.69 ? C5 9E1 4000 D 1 HETATM 17 C C10 9E1 . . . L 2 23.225 48.326 4.437 1 117.53 ? C10 9E1 4000 D 1 HETATM 18 N N4 9E1 . . . L 2 23.384 49.568 3.88 1 120.85 ? N4 9E1 4000 D 1 HETATM 19 C C11 9E1 . . . L 2 23.458 45.989 3.647 1 110.07 ? C11 9E1 4000 D 1 HETATM 20 O O1 9E1 . . . L 2 22.604 45.548 4.41 1 109.26 ? O1 9E1 4000 D 1 HETATM 21 C C12 9E1 . . . L 2 24.103 45.103 2.645 1 107.48 ? C12 9E1 4000 D 1 HETATM 22 C C14 9E1 . . . L 2 24.775 42.817 2.126 1 105.29 ? C14 9E1 4000 D 1 HETATM 23 C C15 9E1 . . . L 2 25.174 43.257 0.855 1 105.09 ? C15 9E1 4000 D 1 HETATM 24 C C17 9E1 . . . L 2 24.451 45.489 1.341 1 106.28 ? C17 9E1 4000 D 1 HETATM 25 O O2 9E1 . . . L 2 24.198 46.779 1.026 1 107.85 ? O2 9E1 4000 D 1 HETATM 26 S S1 9E1 . . . L 2 24.905 41.193 2.457 1 105.42 ? S1 9E1 4000 D 1 HETATM 27 O O3 9E1 . . . L 2 23.766 40.521 1.949 1 104.83 ? O3 9E1 4000 D 1 HETATM 28 O O4 9E1 . . . L 2 26.194 40.777 2.035 1 106.8 ? O4 9E1 4000 D 1 HETATM 29 N N6 9E1 . . . L 2 24.84 41.107 4.081 1 107.06 ? N6 9E1 4000 D 1 HETATM 30 H H8 9E1 . . . L 2 23.818 54.294 1.856 0 132.82 ? H8 9E1 4000 D 1 HETATM 31 H H9 9E1 . . . L 2 21.553 51.321 6.165 0 128.52 ? H9 9E1 4000 D 1 HETATM 32 H H11 9E1 . . . L 2 22.436 47.106 6.083 0 115.77 ? H11 9E1 4000 D 1 HETATM 33 H H13 9E1 . . . L 2 23.954 43.465 4.017 0 105.94 ? H13 9E1 4000 D 1 HETATM 34 H H10 9E1 . . . L 2 21.332 49.045 7.16 0 121.98 ? H10 9E1 4000 D 1 HETATM 35 H H12 9E1 . . . L 2 24.643 47.627 3.096 0 114.18 ? H12 9E1 4000 D 1 HETATM 36 H H18 9E1 . . . L 2 23.918 48.209 -0.304 0 109.16 ? H18 9E1 4000 D 1 HETATM 37 H H16 9E1 . . . L 2 23.641 46.576 -0.993 0 105.75 ? H16 9E1 4000 D 1 HETATM 38 H H17 9E1 . . . L 2 25.317 47.167 -0.711 0 108.3 ? H17 9E1 4000 D 1 HETATM 39 H H15 9E1 . . . L 2 25.341 44.852 -0.552 0 106.46 ? H15 9E1 4000 D 1 HETATM 40 H H1 9E1 . . . L 2 23.017 51.418 -0.597 0 117.92 ? H1 9E1 4000 D 1 HETATM 41 H H3 9E1 . . . L 2 23.712 52.946 -0.078 0 123.24 ? H3 9E1 4000 D 1 HETATM 42 H H2 9E1 . . . L 2 22.048 52.537 0.363 0 121.32 ? H2 9E1 4000 D 1 HETATM 43 H H4 9E1 . . . L 2 22.939 50.484 1.665 0 116.74 ? H4 9E1 4000 D 1 HETATM 44 H H6 9E1 . . . L 2 25.682 51.92 1.224 0 121.21 ? H6 9E1 4000 D 1 HETATM 45 H H7 9E1 . . . L 2 25.188 50.391 0.484 0 115.77 ? H7 9E1 4000 D 1 HETATM 46 H H5 9E1 . . . L 2 25.415 50.494 2.233 0 117.5 ? H5 9E1 4000 D 1 HETATM 47 H H14 9E1 . . . L 2 25.622 42.537 0.154 0 104.74 ? H14 9E1 4000 D 1 HETATM 48 H H19 9E1 . . . L 2 25.639 41.142 4.7 0 107.92 ? H19 9E1 4000 D 1 HETATM 49 H H20 9E1 . . . L 2 24 40.924 4.615 0 106.94 ? H20 9E1 4000 D 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 403 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 49 #