data_5VJO # _model_server_result.job_id k-qx2ts7jIlwOeq0V_dPyA _model_server_result.datetime_utc '2024-10-20 20:26:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vjo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 5VJO # _exptl.entry_id 5VJO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5VJO _cell.length_a 89.02 _cell.length_b 102.91 _cell.length_c 133.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H,K,L,M,P 1 1 C,D,F,I,J,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 140 A CYS 140 1_555 A SG CYS 195 A CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf5 C SG CYS 22 C CYS 22 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf6 C SG CYS 140 C CYS 140 1_555 C SG CYS 195 C CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf7 D SG CYS 23 D CYS 23 1_555 D SG CYS 88 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf8 D SG CYS 134 D CYS 134 1_555 D SG CYS 194 D CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf9 E SG CYS 6 E CYS 6 1_555 E SG CYS 127 E CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf10 E SG CYS 30 E CYS 30 1_555 E SG CYS 115 E CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf11 E SG CYS 64 E CYS 64 1_555 E SG CYS 80 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf12 E SG CYS 76 E CYS 76 1_555 E SG CYS 94 E CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf13 F SG CYS 6 F CYS 6 1_555 F SG CYS 127 F CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf14 F SG CYS 30 F CYS 30 1_555 F SG CYS 115 F CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf15 F SG CYS 64 F CYS 64 1_555 F SG CYS 80 F CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf16 F SG CYS 76 F CYS 76 1_555 F SG CYS 94 F CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 E O SER 60 E SER 60 1_555 K NA NA . E NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc2 E O CYS 64 E CYS 64 1_555 K NA NA . E NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc3 E OG SER 72 E SER 72 1_555 K NA NA . E NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc4 K NA NA . E NA 201 1_555 P O HOH . E HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc5 K NA NA . E NA 201 1_555 P O HOH . E HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5VJO _atom_sites.fract_transf_matrix[1][1] 0.011233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007464 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CL A 1 301 1 CL CL . H 4 CL B 1 301 4 CL CL . I 4 CL C 1 301 2 CL CL . J 4 CL D 1 301 3 CL CL . K 5 NA E 1 201 1 NA NA . L 6 HOH A 1 401 46 HOH HOH . L 6 HOH A 2 402 11 HOH HOH . L 6 HOH A 3 403 39 HOH HOH . L 6 HOH A 4 404 1 HOH HOH . L 6 HOH A 5 405 24 HOH HOH . L 6 HOH A 6 406 10 HOH HOH . L 6 HOH A 7 407 29 HOH HOH . L 6 HOH A 8 408 2 HOH HOH . L 6 HOH A 9 409 27 HOH HOH . L 6 HOH A 10 410 14 HOH HOH . L 6 HOH A 11 411 25 HOH HOH . L 6 HOH A 12 412 30 HOH HOH . L 6 HOH A 13 413 34 HOH HOH . M 6 HOH B 1 401 28 HOH HOH . M 6 HOH B 2 402 33 HOH HOH . M 6 HOH B 3 403 12 HOH HOH . M 6 HOH B 4 404 26 HOH HOH . M 6 HOH B 5 405 35 HOH HOH . M 6 HOH B 6 406 16 HOH HOH . M 6 HOH B 7 407 37 HOH HOH . M 6 HOH B 8 408 13 HOH HOH . M 6 HOH B 9 409 17 HOH HOH . M 6 HOH B 10 410 31 HOH HOH . M 6 HOH B 11 411 32 HOH HOH . N 6 HOH C 1 401 45 HOH HOH . O 6 HOH D 1 401 47 HOH HOH . O 6 HOH D 2 402 48 HOH HOH . O 6 HOH D 3 403 41 HOH HOH . O 6 HOH D 4 404 8 HOH HOH . O 6 HOH D 5 405 6 HOH HOH . O 6 HOH D 6 406 38 HOH HOH . O 6 HOH D 7 407 42 HOH HOH . O 6 HOH D 8 408 9 HOH HOH . P 6 HOH E 1 301 22 HOH HOH . P 6 HOH E 2 302 15 HOH HOH . P 6 HOH E 3 303 23 HOH HOH . P 6 HOH E 4 304 49 HOH HOH . P 6 HOH E 5 305 51 HOH HOH . P 6 HOH E 6 306 21 HOH HOH . P 6 HOH E 7 307 50 HOH HOH . P 6 HOH E 8 308 52 HOH HOH . Q 6 HOH F 1 201 18 HOH HOH . Q 6 HOH F 2 202 7 HOH HOH . Q 6 HOH F 3 203 43 HOH HOH . Q 6 HOH F 4 204 44 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 46.741 _atom_site.Cartn_y 135.659 _atom_site.Cartn_z 20.892 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #