data_5VJV # _model_server_result.job_id TtsWxIOeaETUPcP29nykIw _model_server_result.datetime_utc '2024-11-28 08:38:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5VJV # _exptl.entry_id 5VJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5VJV _cell.length_a 102.6 _cell.length_b 102.6 _cell.length_c 61.04 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VJV _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 13 A ASP 13 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 A NE2 HIS 15 A HIS 15 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc3 A OD2 ASP 47 A ASP 47 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc4 A OD2 ASP 47 A ASP 47 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc5 A OD1 ASN 80 A ASN 80 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc6 A NE2 HIS 213 A HIS 213 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc7 A ND1 HIS 266 A HIS 266 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc8 B O4 PO4 . A PO4 401 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc9 B O2 PO4 . A PO4 401 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc10 C ZN ZN . A ZN 402 1_555 E O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc11 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc12 D ZN ZN . A ZN 403 1_555 E O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5VJV _atom_sites.fract_transf_matrix[1][1] 0.009747 _atom_sites.fract_transf_matrix[1][2] 0.005627 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 3 PO4 PO4 . C 3 ZN A 1 402 1 ZN ZN . D 3 ZN A 1 403 1 ZN ZN . E 4 HOH A 1 501 48 HOH HOH . E 4 HOH A 2 502 67 HOH HOH . E 4 HOH A 3 503 244 HOH HOH . E 4 HOH A 4 504 44 HOH HOH . E 4 HOH A 5 505 118 HOH HOH . E 4 HOH A 6 506 56 HOH HOH . E 4 HOH A 7 507 247 HOH HOH . E 4 HOH A 8 508 135 HOH HOH . E 4 HOH A 9 509 191 HOH HOH . E 4 HOH A 10 510 238 HOH HOH . E 4 HOH A 11 511 154 HOH HOH . E 4 HOH A 12 512 202 HOH HOH . E 4 HOH A 13 513 96 HOH HOH . E 4 HOH A 14 514 165 HOH HOH . E 4 HOH A 15 515 16 HOH HOH . E 4 HOH A 16 516 246 HOH HOH . E 4 HOH A 17 517 213 HOH HOH . E 4 HOH A 18 518 2 HOH HOH . E 4 HOH A 19 519 211 HOH HOH . E 4 HOH A 20 520 27 HOH HOH . E 4 HOH A 21 521 128 HOH HOH . E 4 HOH A 22 522 12 HOH HOH . E 4 HOH A 23 523 49 HOH HOH . E 4 HOH A 24 524 111 HOH HOH . E 4 HOH A 25 525 240 HOH HOH . E 4 HOH A 26 526 76 HOH HOH . E 4 HOH A 27 527 50 HOH HOH . E 4 HOH A 28 528 105 HOH HOH . E 4 HOH A 29 529 69 HOH HOH . E 4 HOH A 30 530 130 HOH HOH . E 4 HOH A 31 531 204 HOH HOH . E 4 HOH A 32 532 73 HOH HOH . E 4 HOH A 33 533 157 HOH HOH . E 4 HOH A 34 534 23 HOH HOH . E 4 HOH A 35 535 24 HOH HOH . E 4 HOH A 36 536 82 HOH HOH . E 4 HOH A 37 537 160 HOH HOH . E 4 HOH A 38 538 26 HOH HOH . E 4 HOH A 39 539 218 HOH HOH . E 4 HOH A 40 540 7 HOH HOH . E 4 HOH A 41 541 203 HOH HOH . E 4 HOH A 42 542 106 HOH HOH . E 4 HOH A 43 543 28 HOH HOH . E 4 HOH A 44 544 155 HOH HOH . E 4 HOH A 45 545 234 HOH HOH . E 4 HOH A 46 546 31 HOH HOH . E 4 HOH A 47 547 141 HOH HOH . E 4 HOH A 48 548 25 HOH HOH . E 4 HOH A 49 549 148 HOH HOH . E 4 HOH A 50 550 54 HOH HOH . E 4 HOH A 51 551 63 HOH HOH . E 4 HOH A 52 552 29 HOH HOH . E 4 HOH A 53 553 172 HOH HOH . E 4 HOH A 54 554 97 HOH HOH . E 4 HOH A 55 555 126 HOH HOH . E 4 HOH A 56 556 39 HOH HOH . E 4 HOH A 57 557 101 HOH HOH . E 4 HOH A 58 558 129 HOH HOH . E 4 HOH A 59 559 93 HOH HOH . E 4 HOH A 60 560 35 HOH HOH . E 4 HOH A 61 561 208 HOH HOH . E 4 HOH A 62 562 10 HOH HOH . E 4 HOH A 63 563 206 HOH HOH . E 4 HOH A 64 564 169 HOH HOH . E 4 HOH A 65 565 92 HOH HOH . E 4 HOH A 66 566 223 HOH HOH . E 4 HOH A 67 567 58 HOH HOH . E 4 HOH A 68 568 75 HOH HOH . E 4 HOH A 69 569 13 HOH HOH . E 4 HOH A 70 570 30 HOH HOH . E 4 HOH A 71 571 42 HOH HOH . E 4 HOH A 72 572 36 HOH HOH . E 4 HOH A 73 573 110 HOH HOH . E 4 HOH A 74 574 34 HOH HOH . E 4 HOH A 75 575 55 HOH HOH . E 4 HOH A 76 576 241 HOH HOH . E 4 HOH A 77 577 140 HOH HOH . E 4 HOH A 78 578 52 HOH HOH . E 4 HOH A 79 579 117 HOH HOH . E 4 HOH A 80 580 33 HOH HOH . E 4 HOH A 81 581 64 HOH HOH . E 4 HOH A 82 582 136 HOH HOH . E 4 HOH A 83 583 5 HOH HOH . E 4 HOH A 84 584 98 HOH HOH . E 4 HOH A 85 585 86 HOH HOH . E 4 HOH A 86 586 173 HOH HOH . E 4 HOH A 87 587 121 HOH HOH . E 4 HOH A 88 588 70 HOH HOH . E 4 HOH A 89 589 137 HOH HOH . E 4 HOH A 90 590 38 HOH HOH . E 4 HOH A 91 591 79 HOH HOH . E 4 HOH A 92 592 15 HOH HOH . E 4 HOH A 93 593 113 HOH HOH . E 4 HOH A 94 594 193 HOH HOH . E 4 HOH A 95 595 188 HOH HOH . E 4 HOH A 96 596 189 HOH HOH . E 4 HOH A 97 597 119 HOH HOH . E 4 HOH A 98 598 207 HOH HOH . E 4 HOH A 99 599 183 HOH HOH . E 4 HOH A 100 600 249 HOH HOH . E 4 HOH A 101 601 74 HOH HOH . E 4 HOH A 102 602 83 HOH HOH . E 4 HOH A 103 603 8 HOH HOH . E 4 HOH A 104 604 41 HOH HOH . E 4 HOH A 105 605 107 HOH HOH . E 4 HOH A 106 606 71 HOH HOH . E 4 HOH A 107 607 32 HOH HOH . E 4 HOH A 108 608 243 HOH HOH . E 4 HOH A 109 609 224 HOH HOH . E 4 HOH A 110 610 91 HOH HOH . E 4 HOH A 111 611 168 HOH HOH . E 4 HOH A 112 612 19 HOH HOH . E 4 HOH A 113 613 37 HOH HOH . E 4 HOH A 114 614 47 HOH HOH . E 4 HOH A 115 615 87 HOH HOH . E 4 HOH A 116 616 123 HOH HOH . E 4 HOH A 117 617 109 HOH HOH . E 4 HOH A 118 618 201 HOH HOH . E 4 HOH A 119 619 209 HOH HOH . E 4 HOH A 120 620 68 HOH HOH . E 4 HOH A 121 621 51 HOH HOH . E 4 HOH A 122 622 122 HOH HOH . E 4 HOH A 123 623 61 HOH HOH . E 4 HOH A 124 624 212 HOH HOH . E 4 HOH A 125 625 11 HOH HOH . E 4 HOH A 126 626 21 HOH HOH . E 4 HOH A 127 627 205 HOH HOH . E 4 HOH A 128 628 80 HOH HOH . E 4 HOH A 129 629 95 HOH HOH . E 4 HOH A 130 630 124 HOH HOH . E 4 HOH A 131 631 22 HOH HOH . E 4 HOH A 132 632 53 HOH HOH . E 4 HOH A 133 633 20 HOH HOH . E 4 HOH A 134 634 108 HOH HOH . E 4 HOH A 135 635 198 HOH HOH . E 4 HOH A 136 636 231 HOH HOH . E 4 HOH A 137 637 77 HOH HOH . E 4 HOH A 138 638 228 HOH HOH . E 4 HOH A 139 639 57 HOH HOH . E 4 HOH A 140 640 163 HOH HOH . E 4 HOH A 141 641 115 HOH HOH . E 4 HOH A 142 642 102 HOH HOH . E 4 HOH A 143 643 65 HOH HOH . E 4 HOH A 144 644 134 HOH HOH . E 4 HOH A 145 645 133 HOH HOH . E 4 HOH A 146 646 215 HOH HOH . E 4 HOH A 147 647 161 HOH HOH . E 4 HOH A 148 648 114 HOH HOH . E 4 HOH A 149 649 156 HOH HOH . E 4 HOH A 150 650 120 HOH HOH . E 4 HOH A 151 651 138 HOH HOH . E 4 HOH A 152 652 103 HOH HOH . E 4 HOH A 153 653 142 HOH HOH . E 4 HOH A 154 654 162 HOH HOH . E 4 HOH A 155 655 14 HOH HOH . E 4 HOH A 156 656 242 HOH HOH . E 4 HOH A 157 657 178 HOH HOH . E 4 HOH A 158 658 66 HOH HOH . E 4 HOH A 159 659 72 HOH HOH . E 4 HOH A 160 660 46 HOH HOH . E 4 HOH A 161 661 245 HOH HOH . E 4 HOH A 162 662 210 HOH HOH . E 4 HOH A 163 663 94 HOH HOH . E 4 HOH A 164 664 43 HOH HOH . E 4 HOH A 165 665 59 HOH HOH . E 4 HOH A 166 666 132 HOH HOH . E 4 HOH A 167 667 127 HOH HOH . E 4 HOH A 168 668 125 HOH HOH . E 4 HOH A 169 669 139 HOH HOH . E 4 HOH A 170 670 171 HOH HOH . E 4 HOH A 171 671 88 HOH HOH . E 4 HOH A 172 672 194 HOH HOH . E 4 HOH A 173 673 250 HOH HOH . E 4 HOH A 174 674 145 HOH HOH . E 4 HOH A 175 675 40 HOH HOH . E 4 HOH A 176 676 197 HOH HOH . E 4 HOH A 177 677 6 HOH HOH . E 4 HOH A 178 678 84 HOH HOH . E 4 HOH A 179 679 221 HOH HOH . E 4 HOH A 180 680 170 HOH HOH . E 4 HOH A 181 681 235 HOH HOH . E 4 HOH A 182 682 147 HOH HOH . E 4 HOH A 183 683 90 HOH HOH . E 4 HOH A 184 684 237 HOH HOH . E 4 HOH A 185 685 167 HOH HOH . E 4 HOH A 186 686 222 HOH HOH . E 4 HOH A 187 687 176 HOH HOH . E 4 HOH A 188 688 239 HOH HOH . E 4 HOH A 189 689 151 HOH HOH . E 4 HOH A 190 690 104 HOH HOH . E 4 HOH A 191 691 164 HOH HOH . E 4 HOH A 192 692 99 HOH HOH . E 4 HOH A 193 693 232 HOH HOH . E 4 HOH A 194 694 175 HOH HOH . E 4 HOH A 195 695 225 HOH HOH . E 4 HOH A 196 696 100 HOH HOH . E 4 HOH A 197 697 248 HOH HOH . E 4 HOH A 198 698 112 HOH HOH . E 4 HOH A 199 699 230 HOH HOH . E 4 HOH A 200 700 229 HOH HOH . E 4 HOH A 201 701 226 HOH HOH . E 4 HOH A 202 702 236 HOH HOH . E 4 HOH A 203 703 200 HOH HOH . E 4 HOH A 204 704 199 HOH HOH . E 4 HOH A 205 705 146 HOH HOH . E 4 HOH A 206 706 62 HOH HOH . E 4 HOH A 207 707 227 HOH HOH . E 4 HOH A 208 708 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 160.489 _atom_site.Cartn_y 13.617 _atom_site.Cartn_z -5.808 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #