data_5VO3
#
_model_server_result.job_id            KV4HoTLVYxa-IRpWpUQEPg 
_model_server_result.datetime_utc      '2024-11-24 22:48:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vo3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    5VO3 
#
_exptl.entry_id    5VO3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VO3 
_cell.length_a            56.648 
_cell.length_b            135.536 
_cell.length_c            149.613 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VO3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -56.648 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 71 A HIS 67 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc2 A OD1 ASP 104 A ASP 100 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc3 A OD2 ASP 104 A ASP 100 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? 
metalc ? metalc4 A OE1 GLU 139 A GLU 135 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc5 A OE2 GLU 139 A GLU 135 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc6 A OE1 GLU 167 A GLU 163 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc7 A OE2 GLU 167 A GLU 163 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc8 A NE2 HIS 353 A HIS 349 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc9 B O2 SIN . A SIN 501 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc10 B O1 SIN . A SIN 501 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc11 B O2 SIN . A SIN 501 1_555 E ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5VO3 
_atom_sites.fract_transf_matrix[1][1]    0.017653 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007378 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006684 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SIN A 1 501 501 SIN SIN . 
C 3 API A 1 502 601 API API . 
D 4 ZN A 1 503 401 ZN ZN . 
E 4 ZN A 1 504 402 ZN ZN . 
F 5 HOH A 1 601 222 HOH HOH . 
F 5 HOH A 2 602 231 HOH HOH . 
F 5 HOH A 3 603 171 HOH HOH . 
F 5 HOH A 4 604 133 HOH HOH . 
F 5 HOH A 5 605 197 HOH HOH . 
F 5 HOH A 6 606 169 HOH HOH . 
F 5 HOH A 7 607 19 HOH HOH . 
F 5 HOH A 8 608 227 HOH HOH . 
F 5 HOH A 9 609 168 HOH HOH . 
F 5 HOH A 10 610 123 HOH HOH . 
F 5 HOH A 11 611 219 HOH HOH . 
F 5 HOH A 12 612 128 HOH HOH . 
F 5 HOH A 13 613 143 HOH HOH . 
F 5 HOH A 14 614 85 HOH HOH . 
F 5 HOH A 15 615 8 HOH HOH . 
F 5 HOH A 16 616 100 HOH HOH . 
F 5 HOH A 17 617 68 HOH HOH . 
F 5 HOH A 18 618 102 HOH HOH . 
F 5 HOH A 19 619 94 HOH HOH . 
F 5 HOH A 20 620 200 HOH HOH . 
F 5 HOH A 21 621 201 HOH HOH . 
F 5 HOH A 22 622 103 HOH HOH . 
F 5 HOH A 23 623 92 HOH HOH . 
F 5 HOH A 24 624 32 HOH HOH . 
F 5 HOH A 25 625 40 HOH HOH . 
F 5 HOH A 26 626 49 HOH HOH . 
F 5 HOH A 27 627 182 HOH HOH . 
F 5 HOH A 28 628 129 HOH HOH . 
F 5 HOH A 29 629 165 HOH HOH . 
F 5 HOH A 30 630 61 HOH HOH . 
F 5 HOH A 31 631 87 HOH HOH . 
F 5 HOH A 32 632 172 HOH HOH . 
F 5 HOH A 33 633 232 HOH HOH . 
F 5 HOH A 34 634 65 HOH HOH . 
F 5 HOH A 35 635 17 HOH HOH . 
F 5 HOH A 36 636 167 HOH HOH . 
F 5 HOH A 37 637 166 HOH HOH . 
F 5 HOH A 38 638 27 HOH HOH . 
F 5 HOH A 39 639 16 HOH HOH . 
F 5 HOH A 40 640 48 HOH HOH . 
F 5 HOH A 41 641 207 HOH HOH . 
F 5 HOH A 42 642 104 HOH HOH . 
F 5 HOH A 43 643 74 HOH HOH . 
F 5 HOH A 44 644 112 HOH HOH . 
F 5 HOH A 45 645 223 HOH HOH . 
F 5 HOH A 46 646 53 HOH HOH . 
F 5 HOH A 47 647 132 HOH HOH . 
F 5 HOH A 48 648 6 HOH HOH . 
F 5 HOH A 49 649 21 HOH HOH . 
F 5 HOH A 50 650 238 HOH HOH . 
F 5 HOH A 51 651 14 HOH HOH . 
F 5 HOH A 52 652 62 HOH HOH . 
F 5 HOH A 53 653 124 HOH HOH . 
F 5 HOH A 54 654 150 HOH HOH . 
F 5 HOH A 55 655 234 HOH HOH . 
F 5 HOH A 56 656 122 HOH HOH . 
F 5 HOH A 57 657 4 HOH HOH . 
F 5 HOH A 58 658 28 HOH HOH . 
F 5 HOH A 59 659 126 HOH HOH . 
F 5 HOH A 60 660 136 HOH HOH . 
F 5 HOH A 61 661 96 HOH HOH . 
F 5 HOH A 62 662 67 HOH HOH . 
F 5 HOH A 63 663 130 HOH HOH . 
F 5 HOH A 64 664 99 HOH HOH . 
F 5 HOH A 65 665 20 HOH HOH . 
F 5 HOH A 66 666 237 HOH HOH . 
F 5 HOH A 67 667 39 HOH HOH . 
F 5 HOH A 68 668 31 HOH HOH . 
F 5 HOH A 69 669 59 HOH HOH . 
F 5 HOH A 70 670 206 HOH HOH . 
F 5 HOH A 71 671 204 HOH HOH . 
F 5 HOH A 72 672 121 HOH HOH . 
F 5 HOH A 73 673 18 HOH HOH . 
F 5 HOH A 74 674 98 HOH HOH . 
F 5 HOH A 75 675 2 HOH HOH . 
F 5 HOH A 76 676 36 HOH HOH . 
F 5 HOH A 77 677 127 HOH HOH . 
F 5 HOH A 78 678 3 HOH HOH . 
F 5 HOH A 79 679 50 HOH HOH . 
F 5 HOH A 80 680 203 HOH HOH . 
F 5 HOH A 81 681 111 HOH HOH . 
F 5 HOH A 82 682 42 HOH HOH . 
F 5 HOH A 83 683 75 HOH HOH . 
F 5 HOH A 84 684 52 HOH HOH . 
F 5 HOH A 85 685 71 HOH HOH . 
F 5 HOH A 86 686 109 HOH HOH . 
F 5 HOH A 87 687 13 HOH HOH . 
F 5 HOH A 88 688 51 HOH HOH . 
F 5 HOH A 89 689 107 HOH HOH . 
F 5 HOH A 90 690 147 HOH HOH . 
F 5 HOH A 91 691 208 HOH HOH . 
F 5 HOH A 92 692 154 HOH HOH . 
F 5 HOH A 93 693 141 HOH HOH . 
F 5 HOH A 94 694 160 HOH HOH . 
F 5 HOH A 95 695 191 HOH HOH . 
F 5 HOH A 96 696 187 HOH HOH . 
F 5 HOH A 97 697 157 HOH HOH . 
F 5 HOH A 98 698 170 HOH HOH . 
F 5 HOH A 99 699 60 HOH HOH . 
F 5 HOH A 100 700 106 HOH HOH . 
F 5 HOH A 101 701 29 HOH HOH . 
F 5 HOH A 102 702 221 HOH HOH . 
F 5 HOH A 103 703 23 HOH HOH . 
F 5 HOH A 104 704 30 HOH HOH . 
F 5 HOH A 105 705 91 HOH HOH . 
F 5 HOH A 106 706 12 HOH HOH . 
F 5 HOH A 107 707 1 HOH HOH . 
F 5 HOH A 108 708 82 HOH HOH . 
F 5 HOH A 109 709 149 HOH HOH . 
F 5 HOH A 110 710 43 HOH HOH . 
F 5 HOH A 111 711 118 HOH HOH . 
F 5 HOH A 112 712 183 HOH HOH . 
F 5 HOH A 113 713 88 HOH HOH . 
F 5 HOH A 114 714 45 HOH HOH . 
F 5 HOH A 115 715 151 HOH HOH . 
F 5 HOH A 116 716 142 HOH HOH . 
F 5 HOH A 117 717 69 HOH HOH . 
F 5 HOH A 118 718 209 HOH HOH . 
F 5 HOH A 119 719 11 HOH HOH . 
F 5 HOH A 120 720 57 HOH HOH . 
F 5 HOH A 121 721 55 HOH HOH . 
F 5 HOH A 122 722 95 HOH HOH . 
F 5 HOH A 123 723 47 HOH HOH . 
F 5 HOH A 124 724 162 HOH HOH . 
F 5 HOH A 125 725 195 HOH HOH . 
F 5 HOH A 126 726 77 HOH HOH . 
F 5 HOH A 127 727 37 HOH HOH . 
F 5 HOH A 128 728 56 HOH HOH . 
F 5 HOH A 129 729 215 HOH HOH . 
F 5 HOH A 130 730 33 HOH HOH . 
F 5 HOH A 131 731 64 HOH HOH . 
F 5 HOH A 132 732 58 HOH HOH . 
F 5 HOH A 133 733 101 HOH HOH . 
F 5 HOH A 134 734 188 HOH HOH . 
F 5 HOH A 135 735 63 HOH HOH . 
F 5 HOH A 136 736 80 HOH HOH . 
F 5 HOH A 137 737 97 HOH HOH . 
F 5 HOH A 138 738 156 HOH HOH . 
F 5 HOH A 139 739 70 HOH HOH . 
F 5 HOH A 140 740 84 HOH HOH . 
F 5 HOH A 141 741 174 HOH HOH . 
F 5 HOH A 142 742 72 HOH HOH . 
F 5 HOH A 143 743 25 HOH HOH . 
F 5 HOH A 144 744 46 HOH HOH . 
F 5 HOH A 145 745 66 HOH HOH . 
F 5 HOH A 146 746 9 HOH HOH . 
F 5 HOH A 147 747 185 HOH HOH . 
F 5 HOH A 148 748 146 HOH HOH . 
F 5 HOH A 149 749 153 HOH HOH . 
F 5 HOH A 150 750 24 HOH HOH . 
F 5 HOH A 151 751 73 HOH HOH . 
F 5 HOH A 152 752 114 HOH HOH . 
F 5 HOH A 153 753 116 HOH HOH . 
F 5 HOH A 154 754 186 HOH HOH . 
F 5 HOH A 155 755 15 HOH HOH . 
F 5 HOH A 156 756 41 HOH HOH . 
F 5 HOH A 157 757 225 HOH HOH . 
F 5 HOH A 158 758 105 HOH HOH . 
F 5 HOH A 159 759 177 HOH HOH . 
F 5 HOH A 160 760 152 HOH HOH . 
F 5 HOH A 161 761 90 HOH HOH . 
F 5 HOH A 162 762 117 HOH HOH . 
F 5 HOH A 163 763 119 HOH HOH . 
F 5 HOH A 164 764 34 HOH HOH . 
F 5 HOH A 165 765 86 HOH HOH . 
F 5 HOH A 166 766 44 HOH HOH . 
F 5 HOH A 167 767 22 HOH HOH . 
F 5 HOH A 168 768 211 HOH HOH . 
F 5 HOH A 169 769 38 HOH HOH . 
F 5 HOH A 170 770 158 HOH HOH . 
F 5 HOH A 171 771 134 HOH HOH . 
F 5 HOH A 172 772 163 HOH HOH . 
F 5 HOH A 173 773 148 HOH HOH . 
F 5 HOH A 174 774 192 HOH HOH . 
F 5 HOH A 175 775 161 HOH HOH . 
F 5 HOH A 176 776 175 HOH HOH . 
F 5 HOH A 177 777 78 HOH HOH . 
F 5 HOH A 178 778 239 HOH HOH . 
F 5 HOH A 179 779 26 HOH HOH . 
F 5 HOH A 180 780 76 HOH HOH . 
F 5 HOH A 181 781 173 HOH HOH . 
F 5 HOH A 182 782 138 HOH HOH . 
F 5 HOH A 183 783 228 HOH HOH . 
F 5 HOH A 184 784 198 HOH HOH . 
F 5 HOH A 185 785 113 HOH HOH . 
F 5 HOH A 186 786 7 HOH HOH . 
F 5 HOH A 187 787 10 HOH HOH . 
F 5 HOH A 188 788 199 HOH HOH . 
F 5 HOH A 189 789 35 HOH HOH . 
F 5 HOH A 190 790 189 HOH HOH . 
F 5 HOH A 191 791 110 HOH HOH . 
F 5 HOH A 192 792 216 HOH HOH . 
F 5 HOH A 193 793 226 HOH HOH . 
F 5 HOH A 194 794 131 HOH HOH . 
F 5 HOH A 195 795 233 HOH HOH . 
F 5 HOH A 196 796 229 HOH HOH . 
F 5 HOH A 197 797 176 HOH HOH . 
F 5 HOH A 198 798 214 HOH HOH . 
F 5 HOH A 199 799 140 HOH HOH . 
F 5 HOH A 200 800 125 HOH HOH . 
F 5 HOH A 201 801 235 HOH HOH . 
F 5 HOH A 202 802 202 HOH HOH . 
F 5 HOH A 203 803 181 HOH HOH . 
F 5 HOH A 204 804 79 HOH HOH . 
F 5 HOH A 205 805 217 HOH HOH . 
F 5 HOH A 206 806 81 HOH HOH . 
F 5 HOH A 207 807 180 HOH HOH . 
F 5 HOH A 208 808 193 HOH HOH . 
F 5 HOH A 209 809 212 HOH HOH . 
F 5 HOH A 210 810 210 HOH HOH . 
F 5 HOH A 211 811 159 HOH HOH . 
F 5 HOH A 212 812 93 HOH HOH . 
F 5 HOH A 213 813 205 HOH HOH . 
F 5 HOH A 214 814 83 HOH HOH . 
F 5 HOH A 215 815 108 HOH HOH . 
F 5 HOH A 216 816 120 HOH HOH . 
F 5 HOH A 217 817 218 HOH HOH . 
F 5 HOH A 218 818 194 HOH HOH . 
F 5 HOH A 219 819 89 HOH HOH . 
F 5 HOH A 220 820 115 HOH HOH . 
F 5 HOH A 221 821 224 HOH HOH . 
F 5 HOH A 222 822 230 HOH HOH . 
F 5 HOH A 223 823 54 HOH HOH . 
F 5 HOH A 224 824 220 HOH HOH . 
F 5 HOH A 225 825 145 HOH HOH . 
F 5 HOH A 226 826 213 HOH HOH . 
F 5 HOH A 227 827 139 HOH HOH . 
F 5 HOH A 228 828 155 HOH HOH . 
F 5 HOH A 229 829 236 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -18.468 
_atom_site.Cartn_y               18.417 
_atom_site.Cartn_z               24.784 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        16.62 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           211 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#