data_5VP9
#
_model_server_result.job_id            qy_tj83j8obRO7vpW9C4cQ 
_model_server_result.datetime_utc      '2024-10-18 19:30:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vp9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    5VP9 
#
_exptl.entry_id    5VP9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VP9 
_cell.length_a            54.792 
_cell.length_b            58.355 
_cell.length_c            60.421 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VP9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 118 A CYS 1097 1_555 D ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc2 A SG CYS 120 A CYS 1099 1_555 D ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc3 A SG CYS 166 A CYS 1145 1_555 D ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc4 A ND1 HIS 170 A HIS 1149 1_555 D ZN ZN . A ZN 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5VP9 
_atom_sites.fract_transf_matrix[1][1]    0.018251 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017136 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016551 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9H7 A 1 1201 1 9H7 LIG . 
C 3 SO4 A 1 1202 1 SO4 SO4 . 
D 4 ZN A 1 1203 1 ZN ZN . 
E 5 HOH A 1 1301 26 HOH HOH . 
E 5 HOH A 2 1302 163 HOH HOH . 
E 5 HOH A 3 1303 38 HOH HOH . 
E 5 HOH A 4 1304 30 HOH HOH . 
E 5 HOH A 5 1305 72 HOH HOH . 
E 5 HOH A 6 1306 92 HOH HOH . 
E 5 HOH A 7 1307 121 HOH HOH . 
E 5 HOH A 8 1308 7 HOH HOH . 
E 5 HOH A 9 1309 31 HOH HOH . 
E 5 HOH A 10 1310 166 HOH HOH . 
E 5 HOH A 11 1311 44 HOH HOH . 
E 5 HOH A 12 1312 162 HOH HOH . 
E 5 HOH A 13 1313 66 HOH HOH . 
E 5 HOH A 14 1314 146 HOH HOH . 
E 5 HOH A 15 1315 150 HOH HOH . 
E 5 HOH A 16 1316 105 HOH HOH . 
E 5 HOH A 17 1317 132 HOH HOH . 
E 5 HOH A 18 1318 93 HOH HOH . 
E 5 HOH A 19 1319 65 HOH HOH . 
E 5 HOH A 20 1320 45 HOH HOH . 
E 5 HOH A 21 1321 106 HOH HOH . 
E 5 HOH A 22 1322 107 HOH HOH . 
E 5 HOH A 23 1323 86 HOH HOH . 
E 5 HOH A 24 1324 145 HOH HOH . 
E 5 HOH A 25 1325 158 HOH HOH . 
E 5 HOH A 26 1326 2 HOH HOH . 
E 5 HOH A 27 1327 154 HOH HOH . 
E 5 HOH A 28 1328 178 HOH HOH . 
E 5 HOH A 29 1329 12 HOH HOH . 
E 5 HOH A 30 1330 95 HOH HOH . 
E 5 HOH A 31 1331 75 HOH HOH . 
E 5 HOH A 32 1332 34 HOH HOH . 
E 5 HOH A 33 1333 18 HOH HOH . 
E 5 HOH A 34 1334 126 HOH HOH . 
E 5 HOH A 35 1335 62 HOH HOH . 
E 5 HOH A 36 1336 79 HOH HOH . 
E 5 HOH A 37 1337 11 HOH HOH . 
E 5 HOH A 38 1338 46 HOH HOH . 
E 5 HOH A 39 1339 119 HOH HOH . 
E 5 HOH A 40 1340 147 HOH HOH . 
E 5 HOH A 41 1341 54 HOH HOH . 
E 5 HOH A 42 1342 77 HOH HOH . 
E 5 HOH A 43 1343 179 HOH HOH . 
E 5 HOH A 44 1344 67 HOH HOH . 
E 5 HOH A 45 1345 91 HOH HOH . 
E 5 HOH A 46 1346 5 HOH HOH . 
E 5 HOH A 47 1347 130 HOH HOH . 
E 5 HOH A 48 1348 49 HOH HOH . 
E 5 HOH A 49 1349 13 HOH HOH . 
E 5 HOH A 50 1350 94 HOH HOH . 
E 5 HOH A 51 1351 80 HOH HOH . 
E 5 HOH A 52 1352 47 HOH HOH . 
E 5 HOH A 53 1353 25 HOH HOH . 
E 5 HOH A 54 1354 20 HOH HOH . 
E 5 HOH A 55 1355 48 HOH HOH . 
E 5 HOH A 56 1356 98 HOH HOH . 
E 5 HOH A 57 1357 15 HOH HOH . 
E 5 HOH A 58 1358 21 HOH HOH . 
E 5 HOH A 59 1359 69 HOH HOH . 
E 5 HOH A 60 1360 57 HOH HOH . 
E 5 HOH A 61 1361 85 HOH HOH . 
E 5 HOH A 62 1362 177 HOH HOH . 
E 5 HOH A 63 1363 51 HOH HOH . 
E 5 HOH A 64 1364 125 HOH HOH . 
E 5 HOH A 65 1365 19 HOH HOH . 
E 5 HOH A 66 1366 97 HOH HOH . 
E 5 HOH A 67 1367 63 HOH HOH . 
E 5 HOH A 68 1368 61 HOH HOH . 
E 5 HOH A 69 1369 96 HOH HOH . 
E 5 HOH A 70 1370 124 HOH HOH . 
E 5 HOH A 71 1371 14 HOH HOH . 
E 5 HOH A 72 1372 29 HOH HOH . 
E 5 HOH A 73 1373 111 HOH HOH . 
E 5 HOH A 74 1374 43 HOH HOH . 
E 5 HOH A 75 1375 33 HOH HOH . 
E 5 HOH A 76 1376 39 HOH HOH . 
E 5 HOH A 77 1377 55 HOH HOH . 
E 5 HOH A 78 1378 78 HOH HOH . 
E 5 HOH A 79 1379 27 HOH HOH . 
E 5 HOH A 80 1380 127 HOH HOH . 
E 5 HOH A 81 1381 68 HOH HOH . 
E 5 HOH A 82 1382 9 HOH HOH . 
E 5 HOH A 83 1383 76 HOH HOH . 
E 5 HOH A 84 1384 4 HOH HOH . 
E 5 HOH A 85 1385 172 HOH HOH . 
E 5 HOH A 86 1386 60 HOH HOH . 
E 5 HOH A 87 1387 35 HOH HOH . 
E 5 HOH A 88 1388 101 HOH HOH . 
E 5 HOH A 89 1389 8 HOH HOH . 
E 5 HOH A 90 1390 23 HOH HOH . 
E 5 HOH A 91 1391 171 HOH HOH . 
E 5 HOH A 92 1392 123 HOH HOH . 
E 5 HOH A 93 1393 17 HOH HOH . 
E 5 HOH A 94 1394 42 HOH HOH . 
E 5 HOH A 95 1395 71 HOH HOH . 
E 5 HOH A 96 1396 164 HOH HOH . 
E 5 HOH A 97 1397 103 HOH HOH . 
E 5 HOH A 98 1398 73 HOH HOH . 
E 5 HOH A 99 1399 174 HOH HOH . 
E 5 HOH A 100 1400 82 HOH HOH . 
E 5 HOH A 101 1401 90 HOH HOH . 
E 5 HOH A 102 1402 100 HOH HOH . 
E 5 HOH A 103 1403 22 HOH HOH . 
E 5 HOH A 104 1404 128 HOH HOH . 
E 5 HOH A 105 1405 148 HOH HOH . 
E 5 HOH A 106 1406 102 HOH HOH . 
E 5 HOH A 107 1407 134 HOH HOH . 
E 5 HOH A 108 1408 64 HOH HOH . 
E 5 HOH A 109 1409 6 HOH HOH . 
E 5 HOH A 110 1410 143 HOH HOH . 
E 5 HOH A 111 1411 81 HOH HOH . 
E 5 HOH A 112 1412 16 HOH HOH . 
E 5 HOH A 113 1413 36 HOH HOH . 
E 5 HOH A 114 1414 129 HOH HOH . 
E 5 HOH A 115 1415 170 HOH HOH . 
E 5 HOH A 116 1416 144 HOH HOH . 
E 5 HOH A 117 1417 83 HOH HOH . 
E 5 HOH A 118 1418 151 HOH HOH . 
E 5 HOH A 119 1419 167 HOH HOH . 
E 5 HOH A 120 1420 84 HOH HOH . 
E 5 HOH A 121 1421 138 HOH HOH . 
E 5 HOH A 122 1422 115 HOH HOH . 
E 5 HOH A 123 1423 161 HOH HOH . 
E 5 HOH A 124 1424 112 HOH HOH . 
E 5 HOH A 125 1425 173 HOH HOH . 
E 5 HOH A 126 1426 114 HOH HOH . 
E 5 HOH A 127 1427 176 HOH HOH . 
E 5 HOH A 128 1428 116 HOH HOH . 
E 5 HOH A 129 1429 141 HOH HOH . 
E 5 HOH A 130 1430 136 HOH HOH . 
E 5 HOH A 131 1431 156 HOH HOH . 
E 5 HOH A 132 1432 131 HOH HOH . 
E 5 HOH A 133 1433 133 HOH HOH . 
E 5 HOH A 134 1434 118 HOH HOH . 
E 5 HOH A 135 1435 41 HOH HOH . 
E 5 HOH A 136 1436 175 HOH HOH . 
E 5 HOH A 137 1437 87 HOH HOH . 
E 5 HOH A 138 1438 139 HOH HOH . 
E 5 HOH A 139 1439 109 HOH HOH . 
E 5 HOH A 140 1440 120 HOH HOH . 
E 5 HOH A 141 1441 168 HOH HOH . 
E 5 HOH A 142 1442 153 HOH HOH . 
E 5 HOH A 143 1443 104 HOH HOH . 
E 5 HOH A 144 1444 159 HOH HOH . 
E 5 HOH A 145 1445 157 HOH HOH . 
E 5 HOH A 146 1446 28 HOH HOH . 
E 5 HOH A 147 1447 110 HOH HOH . 
E 5 HOH A 148 1448 165 HOH HOH . 
E 5 HOH A 149 1449 152 HOH HOH . 
E 5 HOH A 150 1450 74 HOH HOH . 
E 5 HOH A 151 1451 88 HOH HOH . 
E 5 HOH A 152 1452 169 HOH HOH . 
E 5 HOH A 153 1453 140 HOH HOH . 
E 5 HOH A 154 1454 160 HOH HOH . 
E 5 HOH A 155 1455 137 HOH HOH . 
E 5 HOH A 156 1456 122 HOH HOH . 
E 5 HOH A 157 1457 32 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -9.254 
_atom_site.Cartn_y               -22.896 
_atom_site.Cartn_z               -9.169 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        22.62 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#