data_5VQ0
#
_model_server_result.job_id            TzsDdn5s8BqZ4LKWdL8HLQ 
_model_server_result.datetime_utc      '2024-11-22 10:11:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vq0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5VQ0 
#
_exptl.entry_id    5VQ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5VQ0 
_cell.length_a            92.766 
_cell.length_b            92.766 
_cell.length_c            118.415 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VQ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc2 C MG MG . A MG 201 1_555 D O2B GDP . A GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc3 C MG MG . A MG 201 1_555 G O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc4 C MG MG . A MG 201 1_555 G O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc5 C MG MG . A MG 201 1_555 G O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc6 B OG SER 18 B SER 17 1_555 E MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc7 E MG MG . B MG 201 1_555 F O2B GDP . B GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc8 E MG MG . B MG 201 1_555 H O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc9 E MG MG . B MG 201 1_555 H O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc10 E MG MG . B MG 201 1_555 H O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5VQ0 
_atom_sites.fract_transf_matrix[1][1]    0.01078 
_atom_sites.fract_transf_matrix[1][2]    0.006224 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008445 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 201 1 MG MG . 
D 3 GDP A 1 202 1 GDP GDP . 
E 2 MG B 1 201 2 MG MG . 
F 3 GDP B 1 202 2 GDP GDP . 
G 4 HOH A 1 301 30 HOH HOH . 
G 4 HOH A 2 302 62 HOH HOH . 
G 4 HOH A 3 303 58 HOH HOH . 
G 4 HOH A 4 304 11 HOH HOH . 
G 4 HOH A 5 305 9 HOH HOH . 
G 4 HOH A 6 306 54 HOH HOH . 
G 4 HOH A 7 307 45 HOH HOH . 
G 4 HOH A 8 308 26 HOH HOH . 
G 4 HOH A 9 309 20 HOH HOH . 
G 4 HOH A 10 310 51 HOH HOH . 
G 4 HOH A 11 311 33 HOH HOH . 
G 4 HOH A 12 312 17 HOH HOH . 
G 4 HOH A 13 313 24 HOH HOH . 
G 4 HOH A 14 314 41 HOH HOH . 
G 4 HOH A 15 315 23 HOH HOH . 
G 4 HOH A 16 316 12 HOH HOH . 
G 4 HOH A 17 317 39 HOH HOH . 
G 4 HOH A 18 318 3 HOH HOH . 
G 4 HOH A 19 319 61 HOH HOH . 
G 4 HOH A 20 320 14 HOH HOH . 
G 4 HOH A 21 321 40 HOH HOH . 
G 4 HOH A 22 322 52 HOH HOH . 
G 4 HOH A 23 323 46 HOH HOH . 
G 4 HOH A 24 324 5 HOH HOH . 
G 4 HOH A 25 325 4 HOH HOH . 
G 4 HOH A 26 326 59 HOH HOH . 
G 4 HOH A 27 327 55 HOH HOH . 
G 4 HOH A 28 328 32 HOH HOH . 
G 4 HOH A 29 329 18 HOH HOH . 
G 4 HOH A 30 330 1 HOH HOH . 
G 4 HOH A 31 331 37 HOH HOH . 
G 4 HOH A 32 332 13 HOH HOH . 
G 4 HOH A 33 333 56 HOH HOH . 
H 4 HOH B 1 301 60 HOH HOH . 
H 4 HOH B 2 302 28 HOH HOH . 
H 4 HOH B 3 303 64 HOH HOH . 
H 4 HOH B 4 304 25 HOH HOH . 
H 4 HOH B 5 305 27 HOH HOH . 
H 4 HOH B 6 306 10 HOH HOH . 
H 4 HOH B 7 307 50 HOH HOH . 
H 4 HOH B 8 308 42 HOH HOH . 
H 4 HOH B 9 309 22 HOH HOH . 
H 4 HOH B 10 310 19 HOH HOH . 
H 4 HOH B 11 311 34 HOH HOH . 
H 4 HOH B 12 312 47 HOH HOH . 
H 4 HOH B 13 313 48 HOH HOH . 
H 4 HOH B 14 314 16 HOH HOH . 
H 4 HOH B 15 315 15 HOH HOH . 
H 4 HOH B 16 316 29 HOH HOH . 
H 4 HOH B 17 317 6 HOH HOH . 
H 4 HOH B 18 318 53 HOH HOH . 
H 4 HOH B 19 319 63 HOH HOH . 
H 4 HOH B 20 320 44 HOH HOH . 
H 4 HOH B 21 321 21 HOH HOH . 
H 4 HOH B 22 322 7 HOH HOH . 
H 4 HOH B 23 323 43 HOH HOH . 
H 4 HOH B 24 324 35 HOH HOH . 
H 4 HOH B 25 325 31 HOH HOH . 
H 4 HOH B 26 326 36 HOH HOH . 
H 4 HOH B 27 327 8 HOH HOH . 
H 4 HOH B 28 328 49 HOH HOH . 
H 4 HOH B 29 329 38 HOH HOH . 
H 4 HOH B 30 330 2 HOH HOH . 
H 4 HOH B 31 331 57 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -8.212 
_atom_site.Cartn_y               -37.335 
_atom_site.Cartn_z               -21.202 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        42.71 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#