data_5VSK # _model_server_result.job_id Kcebfxos3Dab6Use-vwHXg _model_server_result.datetime_utc '2024-12-02 09:51:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5VSK # _exptl.entry_id 5VSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.935 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-chloro-3-({4-hydroxy-1-[(3S)-3-phenylbutanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.16 _cell.angle_gamma 90 _cell.entry_id 5VSK _cell.length_a 72.39 _cell.length_b 69.63 _cell.length_c 77.97 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F,G,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 108 A CYS 315 1_555 B SG CYS 108 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A SG CYS 93 A CYS 300 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 A OD1 ASP 142 A ASP 349 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc3 A OD2 ASP 142 A ASP 349 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc4 A ND1 HIS 196 A HIS 403 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc5 A OD1 ASP 252 A ASP 459 1_555 H ZN ZN . B ZN 603 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? metalc ? metalc6 A NE2 HIS 254 A HIS 461 1_555 H ZN ZN . B ZN 603 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc7 A OD1 ASP 274 A ASP 481 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc8 A OD2 ASP 274 A ASP 481 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.721 ? metalc ? metalc9 E ZN ZN . A ZN 603 1_556 B OD1 ASP 252 B ASP 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? metalc ? metalc10 B SG CYS 93 B CYS 300 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc11 B ND1 HIS 196 B HIS 403 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc12 B OD1 ASP 274 B ASP 481 1_555 H ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? # _chem_comp.formula 'C24 H26 Cl N3 O3' _chem_comp.formula_weight 439.935 _chem_comp.id 9HS _chem_comp.mon_nstd_flag . _chem_comp.name 7-chloro-3-({4-hydroxy-1-[(3S)-3-phenylbutanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C14 9HS sing 1 n n C21 C20 9HS doub 2 n y C21 C16 9HS sing 3 n y C14 C16 9HS sing 4 n n C14 C13 9HS sing 5 n n C20 C19 9HS sing 6 n y C16 C17 9HS doub 7 n y O2 C12 9HS doub 8 n n C19 C18 9HS doub 9 n y C13 C12 9HS sing 10 n n C17 C18 9HS sing 11 n y C12 N2 9HS sing 12 n n N2 C11 9HS sing 13 n n N2 C22 9HS sing 14 n n C11 C10 9HS sing 15 n n C10 C 9HS sing 16 n n C22 C23 9HS sing 17 n n C9 N1 9HS doub 18 n n C9 N 9HS sing 19 n n N1 C8 9HS sing 20 n n C23 C 9HS sing 21 n n C C1 9HS sing 22 n n C O 9HS sing 23 n n C1 N 9HS sing 24 n n N C2 9HS sing 25 n n C8 C7 9HS doub 26 n y C8 C3 9HS sing 27 n y C7 C6 9HS sing 28 n y CL C6 9HS sing 29 n n C6 C5 9HS doub 30 n y C2 C3 9HS sing 31 n n C2 O1 9HS doub 32 n n C3 C4 9HS doub 33 n y C5 C4 9HS sing 34 n y C7 H5 9HS sing 35 n n C9 H6 9HS sing 36 n n C10 H7 9HS sing 37 n n C10 H8 9HS sing 38 n n C4 H3 9HS sing 39 n n O H 9HS sing 40 n n C1 H2 9HS sing 41 n n C1 H1 9HS sing 42 n n C11 H10 9HS sing 43 n n C11 H9 9HS sing 44 n n C13 H12 9HS sing 45 n n C13 H11 9HS sing 46 n n C14 H13 9HS sing 47 n n C15 H16 9HS sing 48 n n C15 H14 9HS sing 49 n n C15 H15 9HS sing 50 n n C17 H17 9HS sing 51 n n C18 H18 9HS sing 52 n n C19 H19 9HS sing 53 n n C20 H20 9HS sing 54 n n C21 H21 9HS sing 55 n n C22 H23 9HS sing 56 n n C22 H22 9HS sing 57 n n C23 H24 9HS sing 58 n n C23 H25 9HS sing 59 n n C5 H4 9HS sing 60 n n # _atom_sites.entry_id 5VSK _atom_sites.fract_transf_matrix[1][1] 0.013814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002227 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 9HS A 1 601 561 9HS ZZZ . D 3 ZN A 1 602 562 ZN ZN . E 3 ZN A 1 603 563 ZN ZN . F 2 9HS B 1 601 561 9HS ZZZ . G 3 ZN B 1 602 562 ZN ZN . H 3 ZN B 1 603 563 ZN ZN . I 4 HOH B 1 701 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 9HS . . . C 2 77.944 -57.215 181.209 1 138.84 ? C7 9HS 601 A 1 HETATM 2 C C9 9HS . . . C 2 74.752 -58.658 180.23 1 132.75 ? C9 9HS 601 A 1 HETATM 3 N N1 9HS . . . C 2 76.056 -58.326 180.239 1 139.53 ? N1 9HS 601 A 1 HETATM 4 C C2 9HS . . . C 2 74.303 -57.435 182.241 1 126.25 ? C2 9HS 601 A 1 HETATM 5 N N2 9HS . . . C 2 69.87 -56.45 178.573 1 143.78 ? N2 9HS 601 A 1 HETATM 6 C C10 9HS . . . C 2 72.108 -57.044 179.162 1 144.8 ? C10 9HS 601 A 1 HETATM 7 C C4 9HS . . . C 2 76.272 -56.253 183.289 1 138.84 ? C4 9HS 601 A 1 HETATM 8 C C6 9HS . . . C 2 78.45 -56.414 182.229 1 141.39 ? C6 9HS 601 A 1 HETATM 9 N N 9HS . . . C 2 73.882 -58.25 181.17 1 128.16 ? N 9HS 601 A 1 HETATM 10 C C 9HS . . . C 2 71.614 -57.526 180.522 1 140.78 ? C 9HS 601 A 1 HETATM 11 O O 9HS . . . C 2 71.645 -56.425 181.437 1 138.29 ? O 9HS 601 A 1 HETATM 12 C C1 9HS . . . C 2 72.478 -58.662 181.069 1 134.69 ? C1 9HS 601 A 1 HETATM 13 C C11 9HS . . . C 2 71.224 -55.92 178.636 1 146.83 ? C11 9HS 601 A 1 HETATM 14 C C12 9HS . . . C 2 69.203 -56.546 177.425 1 146.3 ? C12 9HS 601 A 1 HETATM 15 C C13 9HS . . . C 2 68.852 -57.945 176.989 1 143.22 ? C13 9HS 601 A 1 HETATM 16 C C14 9HS . . . C 2 69.911 -58.425 175.99 1 141.82 ? C14 9HS 601 A 1 HETATM 17 C C15 9HS . . . C 2 69.327 -58.528 174.583 1 145.05 ? C15 9HS 601 A 1 HETATM 18 C C16 9HS . . . C 2 70.562 -59.722 176.332 1 131.45 ? C16 9HS 601 A 1 HETATM 19 C C17 9HS . . . C 2 69.965 -60.712 177.113 1 126.64 ? C17 9HS 601 A 1 HETATM 20 C C18 9HS . . . C 2 70.644 -61.895 177.38 1 123.85 ? C18 9HS 601 A 1 HETATM 21 C C19 9HS . . . C 2 71.915 -62.103 176.862 1 128.55 ? C19 9HS 601 A 1 HETATM 22 C C20 9HS . . . C 2 72.509 -61.124 176.077 1 127.7 ? C20 9HS 601 A 1 HETATM 23 C C21 9HS . . . C 2 71.833 -59.94 175.813 1 124.91 ? C21 9HS 601 A 1 HETATM 24 C C22 9HS . . . C 2 69.29 -56.873 179.841 1 139.05 ? C22 9HS 601 A 1 HETATM 25 C C23 9HS . . . C 2 70.172 -57.992 180.381 1 140.65 ? C23 9HS 601 A 1 HETATM 26 C C3 9HS . . . C 2 75.732 -57.049 182.29 1 135.75 ? C3 9HS 601 A 1 HETATM 27 C C5 9HS . . . C 2 77.628 -55.94 183.253 1 140.99 ? C5 9HS 601 A 1 HETATM 28 C C8 9HS . . . C 2 76.598 -57.553 181.205 1 140.4 ? C8 9HS 601 A 1 HETATM 29 O O1 9HS . . . C 2 73.503 -57.053 183.12 1 122.54 ? O1 9HS 601 A 1 HETATM 30 O O2 9HS . . . C 2 68.889 -55.585 176.743 1 151.48 ? O2 9HS 601 A 1 HETATM 31 CL CL 9HS . . . C 2 80.191 -55.984 182.225 1 152.42 ? CL 9HS 601 A 1 HETATM 32 H H5 9HS . . . C 2 78.598 -57.573 180.423 1 166.75 ? H5 9HS 601 A 1 HETATM 33 H H6 9HS . . . C 2 74.385 -59.281 179.424 1 159.44 ? H6 9HS 601 A 1 HETATM 34 H H7 9HS . . . C 2 73.137 -56.689 179.252 1 173.9 ? H7 9HS 601 A 1 HETATM 35 H H8 9HS . . . C 2 72.1 -57.876 178.455 1 173.9 ? H8 9HS 601 A 1 HETATM 36 H H3 9HS . . . C 2 75.645 -55.879 184.089 1 166.75 ? H3 9HS 601 A 1 HETATM 37 H H 9HS . . . C 2 71.3 -56.71 182.295 1 166.09 ? H 9HS 601 A 1 HETATM 38 H H2 9HS . . . C 2 72.399 -59.529 180.41 1 161.77 ? H2 9HS 601 A 1 HETATM 39 H H1 9HS . . . C 2 72.112 -58.955 182.056 1 161.77 ? H1 9HS 601 A 1 HETATM 40 H H10 9HS . . . C 2 71.264 -55.059 179.308 1 176.34 ? H10 9HS 601 A 1 HETATM 41 H H9 9HS . . . C 2 71.556 -55.608 177.644 1 176.34 ? H9 9HS 601 A 1 HETATM 42 H H12 9HS . . . C 2 68.827 -58.611 177.855 1 172.01 ? H12 9HS 601 A 1 HETATM 43 H H11 9HS . . . C 2 67.866 -57.953 176.52 1 172.01 ? H11 9HS 601 A 1 HETATM 44 H H13 9HS . . . C 2 70.692 -57.652 175.957 1 170.33 ? H13 9HS 601 A 1 HETATM 45 H H16 9HS . . . C 2 68.523 -59.218 174.584 1 174.2 ? H16 9HS 601 A 1 HETATM 46 H H14 9HS . . . C 2 70.076 -58.861 173.913 1 174.2 ? H14 9HS 601 A 1 HETATM 47 H H15 9HS . . . C 2 68.976 -57.577 174.276 1 174.2 ? H15 9HS 601 A 1 HETATM 48 H H17 9HS . . . C 2 68.975 -60.554 177.521 1 152.11 ? H17 9HS 601 A 1 HETATM 49 H H18 9HS . . . C 2 70.179 -62.658 177.991 1 148.76 ? H18 9HS 601 A 1 HETATM 50 H H19 9HS . . . C 2 72.441 -63.027 177.069 1 154.4 ? H19 9HS 601 A 1 HETATM 51 H H20 9HS . . . C 2 73.501 -61.283 175.673 1 153.38 ? H20 9HS 601 A 1 HETATM 52 H H21 9HS . . . C 2 72.301 -59.178 175.201 1 150.03 ? H21 9HS 601 A 1 HETATM 53 H H23 9HS . . . C 2 68.271 -57.234 179.689 1 167 ? H23 9HS 601 A 1 HETATM 54 H H22 9HS . . . C 2 69.266 -56.038 180.544 1 167 ? H22 9HS 601 A 1 HETATM 55 H H24 9HS . . . C 2 70.13 -58.848 179.704 1 168.91 ? H24 9HS 601 A 1 HETATM 56 H H25 9HS . . . C 2 69.796 -58.314 181.354 1 168.91 ? H25 9HS 601 A 1 HETATM 57 H H4 9HS . . . C 2 78.053 -55.319 184.032 1 169.33 ? H4 9HS 601 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 57 #