data_5VSK
#
_model_server_result.job_id            L-sM_YTCw8oiL3IlGvGBjQ 
_model_server_result.datetime_utc      '2024-12-06 13:57:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vsk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    5VSK 
#
_exptl.entry_id    5VSK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              439.935 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-chloro-3-({4-hydroxy-1-[(3S)-3-phenylbutanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.16 
_cell.angle_gamma         90 
_cell.entry_id            5VSK 
_cell.length_a            72.39 
_cell.length_b            69.63 
_cell.length_c            77.97 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VSK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F,G,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 108 A CYS 315 1_555 B SG CYS 108 B CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A SG CYS 93 A CYS 300 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc2 A OD1 ASP 142 A ASP 349 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc3 A OD2 ASP 142 A ASP 349 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? 
metalc ? metalc4 A ND1 HIS 196 A HIS 403 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc5 A OD1 ASP 252 A ASP 459 1_555 H ZN ZN . B ZN 603 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? 
metalc ? metalc6 A NE2 HIS 254 A HIS 461 1_555 H ZN ZN . B ZN 603 1_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
metalc ? metalc7 A OD1 ASP 274 A ASP 481 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc8 A OD2 ASP 274 A ASP 481 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.721 ? 
metalc ? metalc9 E ZN ZN . A ZN 603 1_556 B OD1 ASP 252 B ASP 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? 
metalc ? metalc10 B SG CYS 93 B CYS 300 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc11 B ND1 HIS 196 B HIS 403 1_555 G ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc12 B OD1 ASP 274 B ASP 481 1_555 H ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? 
#
_chem_comp.formula           'C24 H26 Cl N3 O3' 
_chem_comp.formula_weight    439.935 
_chem_comp.id                9HS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-chloro-3-({4-hydroxy-1-[(3S)-3-phenylbutanoyl]piperidin-4-yl}methyl)quinazolin-4(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 9HS sing 1 n n 
C21 C20 9HS doub 2 n y 
C21 C16 9HS sing 3 n y 
C14 C16 9HS sing 4 n n 
C14 C13 9HS sing 5 n n 
C20 C19 9HS sing 6 n y 
C16 C17 9HS doub 7 n y 
O2 C12 9HS doub 8 n n 
C19 C18 9HS doub 9 n y 
C13 C12 9HS sing 10 n n 
C17 C18 9HS sing 11 n y 
C12 N2 9HS sing 12 n n 
N2 C11 9HS sing 13 n n 
N2 C22 9HS sing 14 n n 
C11 C10 9HS sing 15 n n 
C10 C 9HS sing 16 n n 
C22 C23 9HS sing 17 n n 
C9 N1 9HS doub 18 n n 
C9 N 9HS sing 19 n n 
N1 C8 9HS sing 20 n n 
C23 C 9HS sing 21 n n 
C C1 9HS sing 22 n n 
C O 9HS sing 23 n n 
C1 N 9HS sing 24 n n 
N C2 9HS sing 25 n n 
C8 C7 9HS doub 26 n y 
C8 C3 9HS sing 27 n y 
C7 C6 9HS sing 28 n y 
CL C6 9HS sing 29 n n 
C6 C5 9HS doub 30 n y 
C2 C3 9HS sing 31 n n 
C2 O1 9HS doub 32 n n 
C3 C4 9HS doub 33 n y 
C5 C4 9HS sing 34 n y 
C7 H5 9HS sing 35 n n 
C9 H6 9HS sing 36 n n 
C10 H7 9HS sing 37 n n 
C10 H8 9HS sing 38 n n 
C4 H3 9HS sing 39 n n 
O H 9HS sing 40 n n 
C1 H2 9HS sing 41 n n 
C1 H1 9HS sing 42 n n 
C11 H10 9HS sing 43 n n 
C11 H9 9HS sing 44 n n 
C13 H12 9HS sing 45 n n 
C13 H11 9HS sing 46 n n 
C14 H13 9HS sing 47 n n 
C15 H16 9HS sing 48 n n 
C15 H14 9HS sing 49 n n 
C15 H15 9HS sing 50 n n 
C17 H17 9HS sing 51 n n 
C18 H18 9HS sing 52 n n 
C19 H19 9HS sing 53 n n 
C20 H20 9HS sing 54 n n 
C21 H21 9HS sing 55 n n 
C22 H23 9HS sing 56 n n 
C22 H22 9HS sing 57 n n 
C23 H24 9HS sing 58 n n 
C23 H25 9HS sing 59 n n 
C5 H4 9HS sing 60 n n 
#
_atom_sites.entry_id                     5VSK 
_atom_sites.fract_transf_matrix[1][1]    0.013814 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002227 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014362 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012991 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 9HS A 1 601 561 9HS ZZZ . 
D 3 ZN A 1 602 562 ZN ZN . 
E 3 ZN A 1 603 563 ZN ZN . 
F 2 9HS B 1 601 561 9HS ZZZ . 
G 3 ZN B 1 602 562 ZN ZN . 
H 3 ZN B 1 603 563 ZN ZN . 
I 4 HOH B 1 701 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 9HS . . . F 2 34.532 -60.366 234.869 1 154.9 ? C7 9HS 601 B 1 
HETATM 2 C C9 9HS . . . F 2 37.993 -61.31 235.502 1 157.97 ? C9 9HS 601 B 1 
HETATM 3 N N1 9HS . . . F 2 36.646 -61.292 235.526 1 159.62 ? N1 9HS 601 B 1 
HETATM 4 C C2 9HS . . . F 2 38.107 -59.421 234.032 1 158.69 ? C2 9HS 601 B 1 
HETATM 5 N N2 9HS . . . F 2 42.073 -58.074 237.777 1 149.4 ? N2 9HS 601 B 1 
HETATM 6 C C10 9HS . . . F 2 40.05 -59.001 236.834 1 146.75 ? C10 9HS 601 B 1 
HETATM 7 C C4 9HS . . . F 2 35.903 -58.425 233.322 1 154.18 ? C4 9HS 601 B 1 
HETATM 8 C C6 9HS . . . F 2 33.839 -59.401 234.14 1 156.41 ? C6 9HS 601 B 1 
HETATM 9 N N 9HS . . . F 2 38.73 -60.431 234.796 1 157.07 ? N 9HS 601 B 1 
HETATM 10 C C 9HS . . . F 2 40.77 -59.276 235.517 1 144.86 ? C 9HS 601 B 1 
HETATM 11 O O 9HS . . . F 2 40.596 -58.183 234.605 1 144.59 ? O 9HS 601 B 1 
HETATM 12 C C1 9HS . . . F 2 40.197 -60.517 234.833 1 151.66 ? C1 9HS 601 B 1 
HETATM 13 C C11 9HS . . . F 2 40.649 -57.82 237.592 1 151.23 ? C11 9HS 601 B 1 
HETATM 14 C C12 9HS . . . F 2 42.612 -58.087 238.998 1 152.79 ? C12 9HS 601 B 1 
HETATM 15 C C13 9HS . . . F 2 43.458 -59.278 239.38 1 151.53 ? C13 9HS 601 B 1 
HETATM 16 C C14 9HS . . . F 2 42.692 -60.15 240.38 1 147.99 ? C14 9HS 601 B 1 
HETATM 17 C C15 9HS . . . F 2 43.521 -60.422 241.633 1 150.42 ? C15 9HS 601 B 1 
HETATM 18 C C16 9HS . . . F 2 42.232 -61.444 239.805 1 140.38 ? C16 9HS 601 B 1 
HETATM 19 C C17 9HS . . . F 2 43.02 -62.224 238.96 1 139.76 ? C17 9HS 601 B 1 
HETATM 20 C C18 9HS . . . F 2 42.533 -63.425 238.458 1 137.26 ? C18 9HS 601 B 1 
HETATM 21 C C19 9HS . . . F 2 41.262 -63.861 238.807 1 137.99 ? C19 9HS 601 B 1 
HETATM 22 C C20 9HS . . . F 2 40.478 -63.092 239.656 1 137.74 ? C20 9HS 601 B 1 
HETATM 23 C C21 9HS . . . F 2 40.965 -61.889 240.154 1 136.98 ? C21 9HS 601 B 1 
HETATM 24 C C22 9HS . . . F 2 42.858 -58.279 236.562 1 143.05 ? C22 9HS 601 B 1 
HETATM 25 C C23 9HS . . . F 2 42.257 -59.46 235.803 1 141.18 ? C23 9HS 601 B 1 
HETATM 26 C C3 9HS . . . F 2 36.628 -59.368 234.033 1 156.19 ? C3 9HS 601 B 1 
HETATM 27 C C5 9HS . . . F 2 34.513 -58.446 233.379 1 157.17 ? C5 9HS 601 B 1 
HETATM 28 C C8 9HS . . . F 2 35.921 -60.381 234.84 1 157.25 ? C8 9HS 601 B 1 
HETATM 29 O O1 9HS . . . F 2 38.778 -58.596 233.374 1 159.94 ? O1 9HS 601 B 1 
HETATM 30 O O2 9HS . . . F 2 42.444 -57.184 239.801 1 154.54 ? O2 9HS 601 B 1 
HETATM 31 CL CL 9HS . . . F 2 32.045 -59.378 234.174 1 159.05 ? CL 9HS 601 B 1 
HETATM 32 H H5 9HS . . . F 2 33.992 -61.1 235.453 1 186.02 ? H5 9HS 601 B 1 
HETATM 33 H H6 9HS . . . F 2 38.508 -62.069 236.078 1 189.7 ? H6 9HS 601 B 1 
HETATM 34 H H7 9HS . . . F 2 38.996 -58.799 236.631 1 176.24 ? H7 9HS 601 B 1 
HETATM 35 H H8 9HS . . . F 2 40.101 -59.893 237.462 1 176.24 ? H8 9HS 601 B 1 
HETATM 36 H H3 9HS . . . F 2 36.414 -57.677 232.728 1 185.15 ? H3 9HS 601 B 1 
HETATM 37 H H 9HS . . . F 2 40.947 -57.374 235.001 1 173.65 ? H 9HS 601 B 1 
HETATM 38 H H2 9HS . . . F 2 40.5 -61.412 235.381 1 182.13 ? H2 9HS 601 B 1 
HETATM 39 H H1 9HS . . . F 2 40.587 -60.592 233.816 1 182.13 ? H1 9HS 601 B 1 
HETATM 40 H H10 9HS . . . F 2 40.504 -56.898 237.025 1 181.62 ? H10 9HS 601 B 1 
HETATM 41 H H9 9HS . . . F 2 40.16 -57.711 238.562 1 181.62 ? H9 9HS 601 B 1 
HETATM 42 H H12 9HS . . . F 2 43.699 -59.862 238.489 1 181.97 ? H12 9HS 601 B 1 
HETATM 43 H H11 9HS . . . F 2 44.394 -58.937 239.828 1 181.97 ? H11 9HS 601 B 1 
HETATM 44 H H13 9HS . . . F 2 41.807 -59.579 240.695 1 177.73 ? H13 9HS 601 B 1 
HETATM 45 H H16 9HS . . . F 2 42.964 -61.025 242.301 1 180.65 ? H16 9HS 601 B 1 
HETATM 46 H H14 9HS . . . F 2 43.762 -59.504 242.103 1 180.65 ? H14 9HS 601 B 1 
HETATM 47 H H15 9HS . . . F 2 44.413 -60.925 241.363 1 180.65 ? H15 9HS 601 B 1 
HETATM 48 H H17 9HS . . . F 2 44.011 -61.886 238.683 1 167.85 ? H17 9HS 601 B 1 
HETATM 49 H H18 9HS . . . F 2 43.148 -64.024 237.798 1 164.86 ? H18 9HS 601 B 1 
HETATM 50 H H19 9HS . . . F 2 40.884 -64.799 238.419 1 165.73 ? H19 9HS 601 B 1 
HETATM 51 H H20 9HS . . . F 2 39.485 -63.428 239.93 1 165.43 ? H20 9HS 601 B 1 
HETATM 52 H H21 9HS . . . F 2 40.349 -61.292 240.815 1 164.52 ? H21 9HS 601 B 1 
HETATM 53 H H23 9HS . . . F 2 43.898 -58.488 236.819 1 171.8 ? H23 9HS 601 B 1 
HETATM 54 H H22 9HS . . . F 2 42.828 -57.381 235.941 1 171.8 ? H22 9HS 601 B 1 
HETATM 55 H H24 9HS . . . F 2 42.399 -60.372 236.388 1 169.56 ? H24 9HS 601 B 1 
HETATM 56 H H25 9HS . . . F 2 42.79 -59.588 234.858 1 169.56 ? H25 9HS 601 B 1 
HETATM 57 H H4 9HS . . . F 2 33.945 -57.71 232.824 1 188.74 ? H4 9HS 601 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           57 
#