data_5VWC
#
_model_server_result.job_id            m7_75Saly7M9Q-S1f9xNLw 
_model_server_result.datetime_utc      '2024-11-05 01:30:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vwc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":902}' 
#
_entry.id    5VWC 
#
_exptl.entry_id    5VWC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5VWC 
_cell.length_a            35.49 
_cell.length_b            41.693 
_cell.length_c            51.57 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VWC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     5VWC 
_atom_sites.fract_transf_matrix[1][1]    0.028177 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023985 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019391 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 901 1 EDO EDO . 
C 2 EDO A 1 902 2 EDO EDO . 
D 2 EDO A 1 903 3 EDO EDO . 
E 3 HOH A 1 1001 23 HOH HOH . 
E 3 HOH A 2 1002 15 HOH HOH . 
E 3 HOH A 3 1003 39 HOH HOH . 
E 3 HOH A 4 1004 44 HOH HOH . 
E 3 HOH A 5 1005 43 HOH HOH . 
E 3 HOH A 6 1006 41 HOH HOH . 
E 3 HOH A 7 1007 51 HOH HOH . 
E 3 HOH A 8 1008 46 HOH HOH . 
E 3 HOH A 9 1009 5 HOH HOH . 
E 3 HOH A 10 1010 37 HOH HOH . 
E 3 HOH A 11 1011 11 HOH HOH . 
E 3 HOH A 12 1012 18 HOH HOH . 
E 3 HOH A 13 1013 17 HOH HOH . 
E 3 HOH A 14 1014 42 HOH HOH . 
E 3 HOH A 15 1015 3 HOH HOH . 
E 3 HOH A 16 1016 40 HOH HOH . 
E 3 HOH A 17 1017 1 HOH HOH . 
E 3 HOH A 18 1018 48 HOH HOH . 
E 3 HOH A 19 1019 10 HOH HOH . 
E 3 HOH A 20 1020 8 HOH HOH . 
E 3 HOH A 21 1021 12 HOH HOH . 
E 3 HOH A 22 1022 30 HOH HOH . 
E 3 HOH A 23 1023 14 HOH HOH . 
E 3 HOH A 24 1024 2 HOH HOH . 
E 3 HOH A 25 1025 28 HOH HOH . 
E 3 HOH A 26 1026 9 HOH HOH . 
E 3 HOH A 27 1027 22 HOH HOH . 
E 3 HOH A 28 1028 20 HOH HOH . 
E 3 HOH A 29 1029 21 HOH HOH . 
E 3 HOH A 30 1030 31 HOH HOH . 
E 3 HOH A 31 1031 49 HOH HOH . 
E 3 HOH A 32 1032 7 HOH HOH . 
E 3 HOH A 33 1033 4 HOH HOH . 
E 3 HOH A 34 1034 35 HOH HOH . 
E 3 HOH A 35 1035 24 HOH HOH . 
E 3 HOH A 36 1036 52 HOH HOH . 
E 3 HOH A 37 1037 50 HOH HOH . 
E 3 HOH A 38 1038 34 HOH HOH . 
E 3 HOH A 39 1039 45 HOH HOH . 
E 3 HOH A 40 1040 25 HOH HOH . 
E 3 HOH A 41 1041 33 HOH HOH . 
E 3 HOH A 42 1042 13 HOH HOH . 
E 3 HOH A 43 1043 19 HOH HOH . 
E 3 HOH A 44 1044 26 HOH HOH . 
E 3 HOH A 45 1045 32 HOH HOH . 
E 3 HOH A 46 1046 47 HOH HOH . 
E 3 HOH A 47 1047 29 HOH HOH . 
E 3 HOH A 48 1048 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 -2.07 5.521 12.436 1 20.59 ? C1 EDO 902 A 1 
HETATM 2 O O1 EDO . . . C 2 -3.375 5.258 12.938 1 24.89 ? O1 EDO 902 A 1 
HETATM 3 C C2 EDO . . . C 2 -1.026 5.28 13.511 1 25.44 ? C2 EDO 902 A 1 
HETATM 4 O O2 EDO . . . C 2 0.111 4.657 12.898 1 37.96 ? O2 EDO 902 A 1 
HETATM 5 H H11 EDO . . . C 2 -1.87 4.872 11.58 1 24.73 ? H11 EDO 902 A 1 
HETATM 6 H H12 EDO . . . C 2 -2.011 6.557 12.094 1 24.73 ? H12 EDO 902 A 1 
HETATM 7 H HO1 EDO . . . C 2 -4.026 5.416 12.242 1 29.89 ? HO1 EDO 902 A 1 
HETATM 8 H H21 EDO . . . C 2 -0.733 6.228 13.966 1 30.55 ? H21 EDO 902 A 1 
HETATM 9 H H22 EDO . . . C 2 -1.433 4.633 14.29 1 30.55 ? H22 EDO 902 A 1 
HETATM 10 H HO2 EDO . . . C 2 0.79 4.495 13.567 1 45.58 ? HO2 EDO 902 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#