data_5VWT # _model_server_result.job_id 0s8VpYcFClTwg0cfYbJMYQ _model_server_result.datetime_utc '2024-11-04 23:59:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vwt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":605}' # _entry.id 5VWT # _exptl.entry_id 5VWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5VWT _cell.length_a 218.292 _cell.length_b 218.292 _cell.length_c 319.216 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 I N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 W N N ? 3 X N N ? 3 Z N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 463 n n S O2 SO4 doub 464 n n S O3 SO4 sing 465 n n S O4 SO4 sing 466 n n # _atom_sites.entry_id 5VWT _atom_sites.fract_transf_matrix[1][1] 0.004581 _atom_sites.fract_transf_matrix[1][2] 0.002645 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 601 601 FAD FAD . F 3 SO4 A 1 602 602 SO4 SO4 . G 3 SO4 A 1 603 603 SO4 SO4 . H 4 NDP A 1 604 605 NDP NDP . I 3 SO4 A 1 605 602 SO4 SO4 . J 2 FAD B 1 601 601 FAD FAD . K 3 SO4 B 1 602 602 SO4 SO4 . L 4 NDP B 1 603 604 NDP NDP . M 3 SO4 B 1 604 605 SO4 SO4 . N 3 SO4 B 1 605 607 SO4 SO4 . O 3 SO4 B 1 606 603 SO4 SO4 . P 2 FAD C 1 601 601 FAD FAD . Q 4 NDP C 1 602 605 NDP NDP . R 3 SO4 C 1 603 602 SO4 SO4 . S 3 SO4 C 1 604 603 SO4 SO4 . T 3 SO4 C 1 605 608 SO4 SO4 . U 3 SO4 C 1 606 609 SO4 SO4 . V 2 FAD D 1 601 601 FAD FAD . W 3 SO4 D 1 602 602 SO4 SO4 . X 3 SO4 D 1 603 603 SO4 SO4 . Y 4 NDP D 1 604 605 NDP NDP . Z 3 SO4 D 1 605 610 SO4 SO4 . AA 5 HOH A 1 701 708 HOH HOH . AA 5 HOH A 2 702 706 HOH HOH . AA 5 HOH A 3 703 705 HOH HOH . AA 5 HOH A 4 704 703 HOH HOH . AA 5 HOH A 5 705 701 HOH HOH . AA 5 HOH A 6 706 707 HOH HOH . AA 5 HOH A 7 707 704 HOH HOH . BA 5 HOH B 1 701 701 HOH HOH . BA 5 HOH B 2 702 703 HOH HOH . BA 5 HOH B 3 703 704 HOH HOH . BA 5 HOH B 4 704 702 HOH HOH . CA 5 HOH C 1 701 701 HOH HOH . CA 5 HOH C 2 702 703 HOH HOH . DA 5 HOH D 1 701 701 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 3 71.281 75.393 166.125 1 79.8 ? S SO4 605 A 1 HETATM 2 O O1 SO4 . . . I 3 71.164 75.046 164.706 1 77.99 ? O1 SO4 605 A 1 HETATM 3 O O2 SO4 . . . I 3 71.597 76.828 166.268 1 75.97 ? O2 SO4 605 A 1 HETATM 4 O O3 SO4 . . . I 3 72.318 74.523 166.67 1 67.12 ? O3 SO4 605 A 1 HETATM 5 O O4 SO4 . . . I 3 70.042 75.112 166.858 1 82.96 ? O4 SO4 605 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #