data_5VWU
#
_model_server_result.job_id            AkDrYe9Wzb6ZAQhOJB9lyw 
_model_server_result.datetime_utc      '2024-11-05 00:33:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5vwu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":601}' 
#
_entry.id    5VWU 
#
_exptl.entry_id    5VWU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5VWU 
_cell.length_a            218.247 
_cell.length_b            218.247 
_cell.length_c            318.004 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5VWU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 I N N 
? 2 N N N 
? 2 S N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5VWU 
_atom_sites.fract_transf_matrix[1][1]    0.004582 
_atom_sites.fract_transf_matrix[1][2]    0.002645 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005291 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003145 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 601 601 FAD FAD . 
F 3 NAI A 1 602 602 NAI NDP . 
G 4 SO4 A 1 603 603 SO4 SO4 . 
H 4 SO4 A 1 604 604 SO4 SO4 . 
I 2 FAD B 1 601 601 FAD FAD . 
J 3 NAI B 1 602 602 NAI NDP . 
K 4 SO4 B 1 603 603 SO4 SO4 . 
L 4 SO4 B 1 604 604 SO4 SO4 . 
M 4 SO4 B 1 605 605 SO4 SO4 . 
N 2 FAD C 1 601 601 FAD FAD . 
O 4 SO4 C 1 602 602 SO4 SO4 . 
P 4 SO4 C 1 603 602 SO4 SO4 . 
Q 4 SO4 C 1 604 603 SO4 SO4 . 
R 4 SO4 C 1 605 605 SO4 SO4 . 
S 2 FAD D 1 601 601 FAD FAD . 
T 4 SO4 D 1 602 603 SO4 SO4 . 
U 4 SO4 D 1 603 604 SO4 SO4 . 
V 4 SO4 D 1 604 604 SO4 SO4 . 
W 4 SO4 D 1 605 606 SO4 SO4 . 
X 5 HOH A 1 701 703 HOH HOH . 
X 5 HOH A 2 702 702 HOH HOH . 
Y 5 HOH B 1 701 706 HOH HOH . 
Y 5 HOH B 2 702 703 HOH HOH . 
Y 5 HOH B 3 703 702 HOH HOH . 
Y 5 HOH B 4 704 704 HOH HOH . 
Y 5 HOH B 5 705 705 HOH HOH . 
Y 5 HOH B 6 706 707 HOH HOH . 
Y 5 HOH B 7 707 701 HOH HOH . 
Z 5 HOH C 1 701 702 HOH HOH . 
Z 5 HOH C 2 702 706 HOH HOH . 
Z 5 HOH C 3 703 705 HOH HOH . 
Z 5 HOH C 4 704 707 HOH HOH . 
Z 5 HOH C 5 705 704 HOH HOH . 
AA 5 HOH D 1 701 703 HOH HOH . 
AA 5 HOH D 2 702 705 HOH HOH . 
AA 5 HOH D 3 703 708 HOH HOH . 
AA 5 HOH D 4 704 706 HOH HOH . 
AA 5 HOH D 5 705 707 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . I 2 28.295 106.484 219.622 1 46.7 ? PA FAD 601 B 1 
HETATM 2 O O1A FAD . . . I 2 26.87 106.487 219.232 1 35.01 ? O1A FAD 601 B 1 
HETATM 3 O O2A FAD . . . I 2 29.217 107.527 219.008 1 50.44 ? O2A FAD 601 B 1 
HETATM 4 O O5B FAD . . . I 2 28.438 106.582 221.18 1 46.76 ? O5B FAD 601 B 1 
HETATM 5 C C5B FAD . . . I 2 29.514 107.325 221.792 1 47.98 ? C5B FAD 601 B 1 
HETATM 6 C C4B FAD . . . I 2 28.992 107.921 223.078 1 55.62 ? C4B FAD 601 B 1 
HETATM 7 O O4B FAD . . . I 2 30.096 108.283 223.947 1 51.74 ? O4B FAD 601 B 1 
HETATM 8 C C3B FAD . . . I 2 28.153 109.189 222.895 1 54.42 ? C3B FAD 601 B 1 
HETATM 9 O O3B FAD . . . I 2 27.042 109.192 223.782 1 53.5 ? O3B FAD 601 B 1 
HETATM 10 C C2B FAD . . . I 2 29.148 110.299 223.237 1 53.66 ? C2B FAD 601 B 1 
HETATM 11 O O2B FAD . . . I 2 28.523 111.49 223.705 1 55.13 ? O2B FAD 601 B 1 
HETATM 12 C C1B FAD . . . I 2 29.936 109.625 224.356 1 49.58 ? C1B FAD 601 B 1 
HETATM 13 N N9A FAD . . . I 2 31.238 110.238 224.592 1 42.77 ? N9A FAD 601 B 1 
HETATM 14 C C8A FAD . . . I 2 32.18 110.585 223.657 1 45.18 ? C8A FAD 601 B 1 
HETATM 15 N N7A FAD . . . I 2 33.238 111.184 224.156 1 44.66 ? N7A FAD 601 B 1 
HETATM 16 C C5A FAD . . . I 2 32.968 111.243 225.515 1 43.8 ? C5A FAD 601 B 1 
HETATM 17 C C6A FAD . . . I 2 33.693 111.764 226.603 1 46.58 ? C6A FAD 601 B 1 
HETATM 18 N N6A FAD . . . I 2 34.897 112.332 226.493 1 53.31 ? N6A FAD 601 B 1 
HETATM 19 N N1A FAD . . . I 2 33.137 111.667 227.831 1 48.94 ? N1A FAD 601 B 1 
HETATM 20 C C2A FAD . . . I 2 31.935 111.094 227.953 1 45.8 ? C2A FAD 601 B 1 
HETATM 21 N N3A FAD . . . I 2 31.155 110.573 227.001 1 46.47 ? N3A FAD 601 B 1 
HETATM 22 C C4A FAD . . . I 2 31.734 110.675 225.797 1 44.96 ? C4A FAD 601 B 1 
HETATM 23 N N1 FAD . . . I 2 23.48 102.347 212.6 1 46.35 ? N1 FAD 601 B 1 
HETATM 24 C C2 FAD . . . I 2 22.604 101.449 212.05 1 47.07 ? C2 FAD 601 B 1 
HETATM 25 O O2 FAD . . . I 2 22.319 100.377 212.604 1 39.4 ? O2 FAD 601 B 1 
HETATM 26 N N3 FAD . . . I 2 22.017 101.727 210.827 1 53.22 ? N3 FAD 601 B 1 
HETATM 27 C C4 FAD . . . I 2 22.21 102.868 210.065 1 50.8 ? C4 FAD 601 B 1 
HETATM 28 O O4 FAD . . . I 2 21.612 103.001 208.992 1 52.22 ? O4 FAD 601 B 1 
HETATM 29 C C4X FAD . . . I 2 23.139 103.819 210.66 1 42.6 ? C4X FAD 601 B 1 
HETATM 30 N N5 FAD . . . I 2 23.383 104.927 210.004 1 45.29 ? N5 FAD 601 B 1 
HETATM 31 C C5X FAD . . . I 2 24.268 105.849 210.576 1 48.95 ? C5X FAD 601 B 1 
HETATM 32 C C6 FAD . . . I 2 24.527 107.058 209.922 1 44.89 ? C6 FAD 601 B 1 
HETATM 33 C C7 FAD . . . I 2 25.4 107.999 210.473 1 43.2 ? C7 FAD 601 B 1 
HETATM 34 C C7M FAD . . . I 2 25.682 109.272 209.728 1 44.65 ? C7M FAD 601 B 1 
HETATM 35 C C8 FAD . . . I 2 26.022 107.736 211.706 1 39.15 ? C8 FAD 601 B 1 
HETATM 36 C C8M FAD . . . I 2 26.983 108.723 212.327 1 24.57 ? C8M FAD 601 B 1 
HETATM 37 C C9 FAD . . . I 2 25.755 106.542 212.361 1 40.84 ? C9 FAD 601 B 1 
HETATM 38 C C9A FAD . . . I 2 24.889 105.609 211.807 1 43.67 ? C9A FAD 601 B 1 
HETATM 39 N N10 FAD . . . I 2 24.585 104.43 212.5 1 42.19 ? N10 FAD 601 B 1 
HETATM 40 C C10 FAD . . . I 2 23.736 103.472 211.931 1 41.76 ? C10 FAD 601 B 1 
HETATM 41 C C1' FAD . . . I 2 25.358 104.148 213.708 1 42.31 ? C1' FAD 601 B 1 
HETATM 42 C C2' FAD . . . I 2 24.623 103.615 214.913 1 48.46 ? C2' FAD 601 B 1 
HETATM 43 O O2' FAD . . . I 2 24.002 104.727 215.553 1 47.03 ? O2' FAD 601 B 1 
HETATM 44 C C3' FAD . . . I 2 25.702 103.019 215.827 1 51.13 ? C3' FAD 601 B 1 
HETATM 45 O O3' FAD . . . I 2 25.458 101.732 216.387 1 45.47 ? O3' FAD 601 B 1 
HETATM 46 C C4' FAD . . . I 2 26.218 103.981 216.887 1 51.84 ? C4' FAD 601 B 1 
HETATM 47 O O4' FAD . . . I 2 26.221 105.303 216.344 1 50.39 ? O4' FAD 601 B 1 
HETATM 48 C C5' FAD . . . I 2 27.603 103.568 217.322 1 49.58 ? C5' FAD 601 B 1 
HETATM 49 O O5' FAD . . . I 2 27.555 103.169 218.701 1 45.8 ? O5' FAD 601 B 1 
HETATM 50 P P FAD . . . I 2 28.662 103.621 219.701 1 44.72 ? P FAD 601 B 1 
HETATM 51 O O1P FAD . . . I 2 28.032 103.593 221.099 1 48.87 ? O1P FAD 601 B 1 
HETATM 52 O O2P FAD . . . I 2 29.88 102.816 219.519 1 55.94 ? O2P FAD 601 B 1 
HETATM 53 O O3P FAD . . . I 2 28.947 105.092 219.246 1 47.68 ? O3P FAD 601 B 1 
#
_model_server_stats.io_time_ms              135 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#