data_5VYT # _model_server_result.job_id qqH9OrtTP3pPx-0ZEqAKZg _model_server_result.datetime_utc '2024-10-11 21:51:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vyt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":302}' # _entry.id 5VYT # _exptl.entry_id 5VYT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5VYT _cell.length_a 67.315 _cell.length_b 68.021 _cell.length_c 236.035 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VYT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,O,P 1 1 C,D,I,J,K,L,M,N,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 N N N # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 142 n n PB O2B GDP sing 143 n n PB O3B GDP sing 144 n n PB O3A GDP sing 145 n n O2B HOB2 GDP sing 146 n n O3B HOB3 GDP sing 147 n n O3A PA GDP sing 148 n n PA O1A GDP doub 149 n n PA O2A GDP sing 150 n n PA O5' GDP sing 151 n n O2A HOA2 GDP sing 152 n n O5' C5' GDP sing 153 n n C5' C4' GDP sing 154 n n C5' H5' GDP sing 155 n n C5' "H5''" GDP sing 156 n n C4' O4' GDP sing 157 n n C4' C3' GDP sing 158 n n C4' H4' GDP sing 159 n n O4' C1' GDP sing 160 n n C3' O3' GDP sing 161 n n C3' C2' GDP sing 162 n n C3' H3' GDP sing 163 n n O3' HO3' GDP sing 164 n n C2' O2' GDP sing 165 n n C2' C1' GDP sing 166 n n C2' H2' GDP sing 167 n n O2' HO2' GDP sing 168 n n C1' N9 GDP sing 169 n n C1' H1' GDP sing 170 n n N9 C8 GDP sing 171 n y N9 C4 GDP sing 172 n y C8 N7 GDP doub 173 n y C8 H8 GDP sing 174 n n N7 C5 GDP sing 175 n y C5 C6 GDP sing 176 n n C5 C4 GDP doub 177 n y C6 O6 GDP doub 178 n n C6 N1 GDP sing 179 n n N1 C2 GDP sing 180 n n N1 HN1 GDP sing 181 n n C2 N2 GDP sing 182 n n C2 N3 GDP doub 183 n n N2 HN21 GDP sing 184 n n N2 HN22 GDP sing 185 n n N3 C4 GDP sing 186 n n # _atom_sites.entry_id 5VYT _atom_sites.fract_transf_matrix[1][1] 0.014856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FON A 1 301 1 FON FON . F 3 GDP A 1 302 4 GDP GDP . G 2 FON B 1 301 2 FON FON . H 3 GDP B 1 302 2 GDP GDP . I 2 FON C 1 301 3 FON FON . J 3 GDP C 1 302 3 GDP GDP . K 4 CL C 1 303 1 CL CL . L 4 CL C 1 304 1 CL CL . M 2 FON D 1 301 4 FON FON . N 3 GDP D 1 302 1 GDP GDP . O 5 HOH A 1 401 150 HOH HOH . O 5 HOH A 2 402 201 HOH HOH . O 5 HOH A 3 403 86 HOH HOH . O 5 HOH A 4 404 270 HOH HOH . O 5 HOH A 5 405 139 HOH HOH . O 5 HOH A 6 406 274 HOH HOH . O 5 HOH A 7 407 24 HOH HOH . O 5 HOH A 8 408 10 HOH HOH . O 5 HOH A 9 409 342 HOH HOH . O 5 HOH A 10 410 146 HOH HOH . O 5 HOH A 11 411 41 HOH HOH . O 5 HOH A 12 412 89 HOH HOH . O 5 HOH A 13 413 143 HOH HOH . O 5 HOH A 14 414 15 HOH HOH . O 5 HOH A 15 415 278 HOH HOH . O 5 HOH A 16 416 137 HOH HOH . O 5 HOH A 17 417 195 HOH HOH . O 5 HOH A 18 418 341 HOH HOH . O 5 HOH A 19 419 272 HOH HOH . O 5 HOH A 20 420 289 HOH HOH . O 5 HOH A 21 421 46 HOH HOH . O 5 HOH A 22 422 156 HOH HOH . O 5 HOH A 23 423 147 HOH HOH . O 5 HOH A 24 424 125 HOH HOH . O 5 HOH A 25 425 211 HOH HOH . O 5 HOH A 26 426 214 HOH HOH . O 5 HOH A 27 427 264 HOH HOH . O 5 HOH A 28 428 126 HOH HOH . O 5 HOH A 29 429 148 HOH HOH . O 5 HOH A 30 430 215 HOH HOH . O 5 HOH A 31 431 280 HOH HOH . O 5 HOH A 32 432 213 HOH HOH . O 5 HOH A 33 433 25 HOH HOH . O 5 HOH A 34 434 204 HOH HOH . O 5 HOH A 35 435 192 HOH HOH . O 5 HOH A 36 436 209 HOH HOH . O 5 HOH A 37 437 161 HOH HOH . O 5 HOH A 38 438 277 HOH HOH . O 5 HOH A 39 439 124 HOH HOH . O 5 HOH A 40 440 31 HOH HOH . O 5 HOH A 41 441 145 HOH HOH . O 5 HOH A 42 442 275 HOH HOH . O 5 HOH A 43 443 276 HOH HOH . O 5 HOH A 44 444 9 HOH HOH . O 5 HOH A 45 445 343 HOH HOH . O 5 HOH A 46 446 133 HOH HOH . O 5 HOH A 47 447 282 HOH HOH . O 5 HOH A 48 448 210 HOH HOH . O 5 HOH A 49 449 23 HOH HOH . O 5 HOH A 50 450 284 HOH HOH . O 5 HOH A 51 451 327 HOH HOH . O 5 HOH A 52 452 271 HOH HOH . O 5 HOH A 53 453 328 HOH HOH . O 5 HOH A 54 454 18 HOH HOH . O 5 HOH A 55 455 212 HOH HOH . O 5 HOH A 56 456 144 HOH HOH . O 5 HOH A 57 457 288 HOH HOH . O 5 HOH A 58 458 132 HOH HOH . O 5 HOH A 59 459 6 HOH HOH . O 5 HOH A 60 460 293 HOH HOH . O 5 HOH A 61 461 140 HOH HOH . O 5 HOH A 62 462 281 HOH HOH . O 5 HOH A 63 463 122 HOH HOH . O 5 HOH A 64 464 118 HOH HOH . O 5 HOH A 65 465 322 HOH HOH . O 5 HOH A 66 466 231 HOH HOH . O 5 HOH A 67 467 130 HOH HOH . O 5 HOH A 68 468 131 HOH HOH . O 5 HOH A 69 469 203 HOH HOH . O 5 HOH A 70 470 141 HOH HOH . O 5 HOH A 71 471 290 HOH HOH . O 5 HOH A 72 472 269 HOH HOH . O 5 HOH A 73 473 317 HOH HOH . O 5 HOH A 74 474 286 HOH HOH . O 5 HOH A 75 475 142 HOH HOH . P 5 HOH B 1 401 160 HOH HOH . P 5 HOH B 2 402 228 HOH HOH . P 5 HOH B 3 403 149 HOH HOH . P 5 HOH B 4 404 78 HOH HOH . P 5 HOH B 5 405 261 HOH HOH . P 5 HOH B 6 406 227 HOH HOH . P 5 HOH B 7 407 260 HOH HOH . P 5 HOH B 8 408 77 HOH HOH . P 5 HOH B 9 409 197 HOH HOH . P 5 HOH B 10 410 168 HOH HOH . P 5 HOH B 11 411 36 HOH HOH . P 5 HOH B 12 412 29 HOH HOH . P 5 HOH B 13 413 226 HOH HOH . P 5 HOH B 14 414 258 HOH HOH . P 5 HOH B 15 415 254 HOH HOH . P 5 HOH B 16 416 320 HOH HOH . P 5 HOH B 17 417 79 HOH HOH . P 5 HOH B 18 418 292 HOH HOH . P 5 HOH B 19 419 256 HOH HOH . P 5 HOH B 20 420 38 HOH HOH . P 5 HOH B 21 421 152 HOH HOH . P 5 HOH B 22 422 333 HOH HOH . P 5 HOH B 23 423 194 HOH HOH . P 5 HOH B 24 424 287 HOH HOH . P 5 HOH B 25 425 291 HOH HOH . P 5 HOH B 26 426 11 HOH HOH . P 5 HOH B 27 427 285 HOH HOH . P 5 HOH B 28 428 230 HOH HOH . P 5 HOH B 29 429 3 HOH HOH . P 5 HOH B 30 430 127 HOH HOH . P 5 HOH B 31 431 267 HOH HOH . P 5 HOH B 32 432 128 HOH HOH . P 5 HOH B 33 433 191 HOH HOH . P 5 HOH B 34 434 253 HOH HOH . P 5 HOH B 35 435 154 HOH HOH . P 5 HOH B 36 436 279 HOH HOH . P 5 HOH B 37 437 268 HOH HOH . P 5 HOH B 38 438 257 HOH HOH . P 5 HOH B 39 439 43 HOH HOH . P 5 HOH B 40 440 153 HOH HOH . P 5 HOH B 41 441 332 HOH HOH . P 5 HOH B 42 442 193 HOH HOH . P 5 HOH B 43 443 80 HOH HOH . P 5 HOH B 44 444 255 HOH HOH . P 5 HOH B 45 445 247 HOH HOH . P 5 HOH B 46 446 163 HOH HOH . P 5 HOH B 47 447 273 HOH HOH . P 5 HOH B 48 448 45 HOH HOH . P 5 HOH B 49 449 129 HOH HOH . P 5 HOH B 50 450 248 HOH HOH . P 5 HOH B 51 451 330 HOH HOH . P 5 HOH B 52 452 159 HOH HOH . P 5 HOH B 53 453 321 HOH HOH . P 5 HOH B 54 454 198 HOH HOH . Q 5 HOH C 1 401 331 HOH HOH . Q 5 HOH C 2 402 294 HOH HOH . Q 5 HOH C 3 403 110 HOH HOH . Q 5 HOH C 4 404 115 HOH HOH . Q 5 HOH C 5 405 245 HOH HOH . Q 5 HOH C 6 406 298 HOH HOH . Q 5 HOH C 7 407 200 HOH HOH . Q 5 HOH C 8 408 108 HOH HOH . Q 5 HOH C 9 409 116 HOH HOH . Q 5 HOH C 10 410 266 HOH HOH . Q 5 HOH C 11 411 74 HOH HOH . Q 5 HOH C 12 412 33 HOH HOH . Q 5 HOH C 13 413 169 HOH HOH . Q 5 HOH C 14 414 243 HOH HOH . Q 5 HOH C 15 415 21 HOH HOH . Q 5 HOH C 16 416 246 HOH HOH . Q 5 HOH C 17 417 162 HOH HOH . Q 5 HOH C 18 418 297 HOH HOH . Q 5 HOH C 19 419 39 HOH HOH . Q 5 HOH C 20 420 295 HOH HOH . Q 5 HOH C 21 421 19 HOH HOH . Q 5 HOH C 22 422 111 HOH HOH . Q 5 HOH C 23 423 205 HOH HOH . Q 5 HOH C 24 424 64 HOH HOH . Q 5 HOH C 25 425 123 HOH HOH . Q 5 HOH C 26 426 207 HOH HOH . Q 5 HOH C 27 427 263 HOH HOH . Q 5 HOH C 28 428 109 HOH HOH . Q 5 HOH C 29 429 119 HOH HOH . Q 5 HOH C 30 430 106 HOH HOH . Q 5 HOH C 31 431 55 HOH HOH . Q 5 HOH C 32 432 199 HOH HOH . Q 5 HOH C 33 433 221 HOH HOH . Q 5 HOH C 34 434 56 HOH HOH . Q 5 HOH C 35 435 105 HOH HOH . Q 5 HOH C 36 436 299 HOH HOH . Q 5 HOH C 37 437 158 HOH HOH . Q 5 HOH C 38 438 34 HOH HOH . Q 5 HOH C 39 439 27 HOH HOH . Q 5 HOH C 40 440 232 HOH HOH . Q 5 HOH C 41 441 17 HOH HOH . Q 5 HOH C 42 442 172 HOH HOH . Q 5 HOH C 43 443 136 HOH HOH . Q 5 HOH C 44 444 296 HOH HOH . Q 5 HOH C 45 445 14 HOH HOH . Q 5 HOH C 46 446 112 HOH HOH . Q 5 HOH C 47 447 206 HOH HOH . Q 5 HOH C 48 448 170 HOH HOH . Q 5 HOH C 49 449 308 HOH HOH . Q 5 HOH C 50 450 75 HOH HOH . Q 5 HOH C 51 451 135 HOH HOH . Q 5 HOH C 52 452 16 HOH HOH . Q 5 HOH C 53 453 174 HOH HOH . Q 5 HOH C 54 454 218 HOH HOH . Q 5 HOH C 55 455 69 HOH HOH . Q 5 HOH C 56 456 107 HOH HOH . Q 5 HOH C 57 457 8 HOH HOH . Q 5 HOH C 58 458 219 HOH HOH . Q 5 HOH C 59 459 233 HOH HOH . Q 5 HOH C 60 460 20 HOH HOH . Q 5 HOH C 61 461 323 HOH HOH . Q 5 HOH C 62 462 67 HOH HOH . Q 5 HOH C 63 463 62 HOH HOH . Q 5 HOH C 64 464 157 HOH HOH . Q 5 HOH C 65 465 234 HOH HOH . Q 5 HOH C 66 466 121 HOH HOH . Q 5 HOH C 67 467 216 HOH HOH . Q 5 HOH C 68 468 35 HOH HOH . Q 5 HOH C 69 469 13 HOH HOH . Q 5 HOH C 70 470 217 HOH HOH . Q 5 HOH C 71 471 300 HOH HOH . Q 5 HOH C 72 472 4 HOH HOH . Q 5 HOH C 73 473 1 HOH HOH . Q 5 HOH C 74 474 71 HOH HOH . Q 5 HOH C 75 475 82 HOH HOH . Q 5 HOH C 76 476 244 HOH HOH . Q 5 HOH C 77 477 5 HOH HOH . Q 5 HOH C 78 478 337 HOH HOH . Q 5 HOH C 79 479 326 HOH HOH . Q 5 HOH C 80 480 120 HOH HOH . Q 5 HOH C 81 481 68 HOH HOH . Q 5 HOH C 82 482 63 HOH HOH . Q 5 HOH C 83 483 66 HOH HOH . Q 5 HOH C 84 484 114 HOH HOH . Q 5 HOH C 85 485 220 HOH HOH . Q 5 HOH C 86 486 81 HOH HOH . R 5 HOH D 1 401 240 HOH HOH . R 5 HOH D 2 402 57 HOH HOH . R 5 HOH D 3 403 51 HOH HOH . R 5 HOH D 4 404 307 HOH HOH . R 5 HOH D 5 405 50 HOH HOH . R 5 HOH D 6 406 183 HOH HOH . R 5 HOH D 7 407 187 HOH HOH . R 5 HOH D 8 408 49 HOH HOH . R 5 HOH D 9 409 262 HOH HOH . R 5 HOH D 10 410 61 HOH HOH . R 5 HOH D 11 411 304 HOH HOH . R 5 HOH D 12 412 179 HOH HOH . R 5 HOH D 13 413 100 HOH HOH . R 5 HOH D 14 414 165 HOH HOH . R 5 HOH D 15 415 103 HOH HOH . R 5 HOH D 16 416 42 HOH HOH . R 5 HOH D 17 417 26 HOH HOH . R 5 HOH D 18 418 178 HOH HOH . R 5 HOH D 19 419 91 HOH HOH . R 5 HOH D 20 420 237 HOH HOH . R 5 HOH D 21 421 58 HOH HOH . R 5 HOH D 22 422 48 HOH HOH . R 5 HOH D 23 423 54 HOH HOH . R 5 HOH D 24 424 223 HOH HOH . R 5 HOH D 25 425 94 HOH HOH . R 5 HOH D 26 426 316 HOH HOH . R 5 HOH D 27 427 164 HOH HOH . R 5 HOH D 28 428 242 HOH HOH . R 5 HOH D 29 429 305 HOH HOH . R 5 HOH D 30 430 311 HOH HOH . R 5 HOH D 31 431 90 HOH HOH . R 5 HOH D 32 432 92 HOH HOH . R 5 HOH D 33 433 175 HOH HOH . R 5 HOH D 34 434 340 HOH HOH . R 5 HOH D 35 435 32 HOH HOH . R 5 HOH D 36 436 97 HOH HOH . R 5 HOH D 37 437 186 HOH HOH . R 5 HOH D 38 438 239 HOH HOH . R 5 HOH D 39 439 249 HOH HOH . R 5 HOH D 40 440 222 HOH HOH . R 5 HOH D 41 441 47 HOH HOH . R 5 HOH D 42 442 176 HOH HOH . R 5 HOH D 43 443 315 HOH HOH . R 5 HOH D 44 444 312 HOH HOH . R 5 HOH D 45 445 309 HOH HOH . R 5 HOH D 46 446 30 HOH HOH . R 5 HOH D 47 447 334 HOH HOH . R 5 HOH D 48 448 224 HOH HOH . R 5 HOH D 49 449 301 HOH HOH . R 5 HOH D 50 450 335 HOH HOH . R 5 HOH D 51 451 325 HOH HOH . R 5 HOH D 52 452 182 HOH HOH . R 5 HOH D 53 453 250 HOH HOH . R 5 HOH D 54 454 12 HOH HOH . R 5 HOH D 55 455 324 HOH HOH . R 5 HOH D 56 456 338 HOH HOH . R 5 HOH D 57 457 303 HOH HOH . R 5 HOH D 58 458 28 HOH HOH . R 5 HOH D 59 459 238 HOH HOH . R 5 HOH D 60 460 265 HOH HOH . R 5 HOH D 61 461 225 HOH HOH . R 5 HOH D 62 462 310 HOH HOH . R 5 HOH D 63 463 185 HOH HOH . R 5 HOH D 64 464 40 HOH HOH . R 5 HOH D 65 465 306 HOH HOH . R 5 HOH D 66 466 37 HOH HOH . R 5 HOH D 67 467 84 HOH HOH . R 5 HOH D 68 468 104 HOH HOH . R 5 HOH D 69 469 241 HOH HOH . R 5 HOH D 70 470 329 HOH HOH . R 5 HOH D 71 471 184 HOH HOH . R 5 HOH D 72 472 96 HOH HOH . R 5 HOH D 73 473 44 HOH HOH . R 5 HOH D 74 474 190 HOH HOH . R 5 HOH D 75 475 83 HOH HOH . R 5 HOH D 76 476 189 HOH HOH . R 5 HOH D 77 477 102 HOH HOH . R 5 HOH D 78 478 99 HOH HOH . R 5 HOH D 79 479 2 HOH HOH . R 5 HOH D 80 480 188 HOH HOH . R 5 HOH D 81 481 302 HOH HOH . R 5 HOH D 82 482 95 HOH HOH . R 5 HOH D 83 483 336 HOH HOH . R 5 HOH D 84 484 313 HOH HOH . R 5 HOH D 85 485 60 HOH HOH . R 5 HOH D 86 486 339 HOH HOH . R 5 HOH D 87 487 59 HOH HOH . R 5 HOH D 88 488 53 HOH HOH . R 5 HOH D 89 489 52 HOH HOH . R 5 HOH D 90 490 85 HOH HOH . R 5 HOH D 91 491 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . N 3 33.358 -6.84 -60.437 1 65.15 ? PB GDP 302 D 1 HETATM 2 O O1B GDP . . . N 3 32.982 -8.017 -61.313 1 61.35 ? O1B GDP 302 D 1 HETATM 3 O O2B GDP . . . N 3 32.305 -6.545 -59.389 1 56.88 ? O2B GDP 302 D 1 HETATM 4 O O3B GDP . . . N 3 34.834 -6.932 -60.055 1 65.16 ? O3B GDP 302 D 1 HETATM 5 O O3A GDP . . . N 3 33.293 -5.556 -61.391 1 51.57 ? O3A GDP 302 D 1 HETATM 6 P PA GDP . . . N 3 32.832 -4.052 -61.081 1 49.9 ? PA GDP 302 D 1 HETATM 7 O O1A GDP . . . N 3 33.868 -3.178 -61.76 1 51.36 ? O1A GDP 302 D 1 HETATM 8 O O2A GDP . . . N 3 31.365 -3.947 -61.437 1 48.19 ? O2A GDP 302 D 1 HETATM 9 O O5' GDP . . . N 3 32.844 -3.675 -59.524 1 48.43 ? O5' GDP 302 D 1 HETATM 10 C C5' GDP . . . N 3 32.176 -2.487 -59.063 1 41 ? C5' GDP 302 D 1 HETATM 11 C C4' GDP . . . N 3 32.893 -1.881 -57.857 1 38.22 ? C4' GDP 302 D 1 HETATM 12 O O4' GDP . . . N 3 33.153 -2.82 -56.807 1 33.64 ? O4' GDP 302 D 1 HETATM 13 C C3' GDP . . . N 3 34.261 -1.317 -58.205 1 35.33 ? C3' GDP 302 D 1 HETATM 14 O O3' GDP . . . N 3 34.109 0.026 -58.666 1 36.67 ? O3' GDP 302 D 1 HETATM 15 C C2' GDP . . . N 3 35.059 -1.44 -56.916 1 31.74 ? C2' GDP 302 D 1 HETATM 16 O O2' GDP . . . N 3 34.89 -0.305 -56.076 1 28.61 ? O2' GDP 302 D 1 HETATM 17 C C1' GDP . . . N 3 34.417 -2.593 -56.199 1 30.43 ? C1' GDP 302 D 1 HETATM 18 N N9 GDP . . . N 3 35.217 -3.812 -56.29 1 29.27 ? N9 GDP 302 D 1 HETATM 19 C C8 GDP . . . N 3 35.329 -4.627 -57.352 1 29.38 ? C8 GDP 302 D 1 HETATM 20 N N7 GDP . . . N 3 36.133 -5.689 -57.081 1 29.41 ? N7 GDP 302 D 1 HETATM 21 C C5 GDP . . . N 3 36.55 -5.529 -55.822 1 30.2 ? C5 GDP 302 D 1 HETATM 22 C C6 GDP . . . N 3 37.413 -6.274 -54.903 1 30.82 ? C6 GDP 302 D 1 HETATM 23 O O6 GDP . . . N 3 37.948 -7.32 -55.286 1 34.08 ? O6 GDP 302 D 1 HETATM 24 N N1 GDP . . . N 3 37.6 -5.81 -53.655 1 31.59 ? N1 GDP 302 D 1 HETATM 25 C C2 GDP . . . N 3 37.02 -4.668 -53.224 1 29.1 ? C2 GDP 302 D 1 HETATM 26 N N2 GDP . . . N 3 37.268 -4.276 -51.95 1 28.91 ? N2 GDP 302 D 1 HETATM 27 N N3 GDP . . . N 3 36.198 -3.917 -54.017 1 27.35 ? N3 GDP 302 D 1 HETATM 28 C C4 GDP . . . N 3 35.932 -4.3 -55.291 1 29.22 ? C4 GDP 302 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #