data_5VZ4 # _model_server_result.job_id HLINtF-Oi6Husb6gDD4Cqg _model_server_result.datetime_utc '2024-11-04 23:24:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 5VZ4 # _exptl.entry_id 5VZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 79.904 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BROMIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5VZ4 _cell.length_a 75.352 _cell.length_b 88.768 _cell.length_c 121.293 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -88.768 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 14 A CYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 15 A CYS 15 1_555 A SG CYS 78 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf3 A SG CYS 44 A CYS 44 1_555 A SG CYS 109 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? disulf ? disulf4 A SG CYS 48 A CYS 48 1_555 A SG CYS 111 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? disulf ? disulf5 B SG CYS 25 B CYS 131 1_555 B SG CYS 83 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf6 B SG CYS 32 B CYS 138 1_555 B SG CYS 38 B CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? disulf ? disulf7 B SG CYS 49 B CYS 155 1_555 B SG CYS 61 B CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf8 B SG CYS 56 B CYS 162 1_555 B SG CYS 104 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? disulf ? disulf9 B SG CYS 85 B CYS 191 1_555 B SG CYS 92 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf10 B SG CYS 114 B CYS 220 1_555 B SG CYS 185 B CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf11 B SG CYS 121 B CYS 227 1_555 B SG CYS 127 B CYS 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? disulf ? disulf12 B SG CYS 138 B CYS 244 1_555 B SG CYS 169 B CYS 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf13 B SG CYS 146 B CYS 252 1_555 B SG CYS 152 B CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf14 B SG CYS 163 B CYS 269 1_555 B SG CYS 210 B CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf15 B SG CYS 187 B CYS 293 1_555 B SG CYS 198 B CYS 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? # _chem_comp.formula 'Br -1' _chem_comp.formula_weight 79.904 _chem_comp.id BR _chem_comp.mon_nstd_flag . _chem_comp.name 'BROMIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5VZ4 _atom_sites.fract_transf_matrix[1][1] 0.013271 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 BR A 1 201 1 BR BR . D 3 BR A 1 202 2 BR BR . E 4 EDO A 1 203 5 EDO EDO . F 4 EDO A 1 204 7 EDO EDO . G 5 SO4 B 1 401 3 SO4 SO4 . H 5 SO4 B 1 402 4 SO4 SO4 . I 4 EDO B 1 403 6 EDO EDO . J 6 HOH A 1 301 3 HOH HOH . J 6 HOH A 2 302 80 HOH HOH . J 6 HOH A 3 303 65 HOH HOH . J 6 HOH A 4 304 68 HOH HOH . J 6 HOH A 5 305 20 HOH HOH . J 6 HOH A 6 306 122 HOH HOH . J 6 HOH A 7 307 21 HOH HOH . J 6 HOH A 8 308 110 HOH HOH . J 6 HOH A 9 309 57 HOH HOH . J 6 HOH A 10 310 52 HOH HOH . J 6 HOH A 11 311 42 HOH HOH . J 6 HOH A 12 312 51 HOH HOH . J 6 HOH A 13 313 48 HOH HOH . J 6 HOH A 14 314 26 HOH HOH . J 6 HOH A 15 315 12 HOH HOH . J 6 HOH A 16 316 134 HOH HOH . J 6 HOH A 17 317 30 HOH HOH . J 6 HOH A 18 318 1 HOH HOH . J 6 HOH A 19 319 132 HOH HOH . J 6 HOH A 20 320 100 HOH HOH . J 6 HOH A 21 321 11 HOH HOH . J 6 HOH A 22 322 94 HOH HOH . J 6 HOH A 23 323 109 HOH HOH . J 6 HOH A 24 324 2 HOH HOH . J 6 HOH A 25 325 79 HOH HOH . J 6 HOH A 26 326 17 HOH HOH . J 6 HOH A 27 327 105 HOH HOH . J 6 HOH A 28 328 10 HOH HOH . J 6 HOH A 29 329 101 HOH HOH . J 6 HOH A 30 330 22 HOH HOH . J 6 HOH A 31 331 16 HOH HOH . J 6 HOH A 32 332 59 HOH HOH . J 6 HOH A 33 333 139 HOH HOH . J 6 HOH A 34 334 41 HOH HOH . J 6 HOH A 35 335 91 HOH HOH . J 6 HOH A 36 336 29 HOH HOH . J 6 HOH A 37 337 14 HOH HOH . J 6 HOH A 38 338 49 HOH HOH . J 6 HOH A 39 339 69 HOH HOH . J 6 HOH A 40 340 71 HOH HOH . J 6 HOH A 41 341 67 HOH HOH . J 6 HOH A 42 342 62 HOH HOH . J 6 HOH A 43 343 32 HOH HOH . J 6 HOH A 44 344 8 HOH HOH . J 6 HOH A 45 345 95 HOH HOH . J 6 HOH A 46 346 135 HOH HOH . J 6 HOH A 47 347 72 HOH HOH . J 6 HOH A 48 348 140 HOH HOH . J 6 HOH A 49 349 27 HOH HOH . J 6 HOH A 50 350 37 HOH HOH . J 6 HOH A 51 351 138 HOH HOH . J 6 HOH A 52 352 90 HOH HOH . J 6 HOH A 53 353 9 HOH HOH . J 6 HOH A 54 354 121 HOH HOH . J 6 HOH A 55 355 15 HOH HOH . J 6 HOH A 56 356 84 HOH HOH . J 6 HOH A 57 357 144 HOH HOH . J 6 HOH A 58 358 99 HOH HOH . J 6 HOH A 59 359 19 HOH HOH . J 6 HOH A 60 360 96 HOH HOH . J 6 HOH A 61 361 97 HOH HOH . J 6 HOH A 62 362 142 HOH HOH . J 6 HOH A 63 363 53 HOH HOH . J 6 HOH A 64 364 70 HOH HOH . J 6 HOH A 65 365 106 HOH HOH . J 6 HOH A 66 366 125 HOH HOH . J 6 HOH A 67 367 141 HOH HOH . J 6 HOH A 68 368 133 HOH HOH . J 6 HOH A 69 369 31 HOH HOH . J 6 HOH A 70 370 126 HOH HOH . J 6 HOH A 71 371 143 HOH HOH . J 6 HOH A 72 372 136 HOH HOH . K 6 HOH B 1 501 63 HOH HOH . K 6 HOH B 2 502 93 HOH HOH . K 6 HOH B 3 503 77 HOH HOH . K 6 HOH B 4 504 54 HOH HOH . K 6 HOH B 5 505 61 HOH HOH . K 6 HOH B 6 506 88 HOH HOH . K 6 HOH B 7 507 118 HOH HOH . K 6 HOH B 8 508 104 HOH HOH . K 6 HOH B 9 509 123 HOH HOH . K 6 HOH B 10 510 137 HOH HOH . K 6 HOH B 11 511 102 HOH HOH . K 6 HOH B 12 512 38 HOH HOH . K 6 HOH B 13 513 6 HOH HOH . K 6 HOH B 14 514 55 HOH HOH . K 6 HOH B 15 515 113 HOH HOH . K 6 HOH B 16 516 5 HOH HOH . K 6 HOH B 17 517 44 HOH HOH . K 6 HOH B 18 518 33 HOH HOH . K 6 HOH B 19 519 13 HOH HOH . K 6 HOH B 20 520 115 HOH HOH . K 6 HOH B 21 521 34 HOH HOH . K 6 HOH B 22 522 130 HOH HOH . K 6 HOH B 23 523 116 HOH HOH . K 6 HOH B 24 524 56 HOH HOH . K 6 HOH B 25 525 83 HOH HOH . K 6 HOH B 26 526 46 HOH HOH . K 6 HOH B 27 527 129 HOH HOH . K 6 HOH B 28 528 112 HOH HOH . K 6 HOH B 29 529 60 HOH HOH . K 6 HOH B 30 530 7 HOH HOH . K 6 HOH B 31 531 86 HOH HOH . K 6 HOH B 32 532 25 HOH HOH . K 6 HOH B 33 533 76 HOH HOH . K 6 HOH B 34 534 81 HOH HOH . K 6 HOH B 35 535 40 HOH HOH . K 6 HOH B 36 536 66 HOH HOH . K 6 HOH B 37 537 4 HOH HOH . K 6 HOH B 38 538 39 HOH HOH . K 6 HOH B 39 539 24 HOH HOH . K 6 HOH B 40 540 45 HOH HOH . K 6 HOH B 41 541 103 HOH HOH . K 6 HOH B 42 542 107 HOH HOH . K 6 HOH B 43 543 119 HOH HOH . K 6 HOH B 44 544 23 HOH HOH . K 6 HOH B 45 545 117 HOH HOH . K 6 HOH B 46 546 64 HOH HOH . K 6 HOH B 47 547 92 HOH HOH . K 6 HOH B 48 548 85 HOH HOH . K 6 HOH B 49 549 131 HOH HOH . K 6 HOH B 50 550 82 HOH HOH . K 6 HOH B 51 551 120 HOH HOH . K 6 HOH B 52 552 18 HOH HOH . K 6 HOH B 53 553 111 HOH HOH . K 6 HOH B 54 554 73 HOH HOH . K 6 HOH B 55 555 58 HOH HOH . K 6 HOH B 56 556 78 HOH HOH . K 6 HOH B 57 557 47 HOH HOH . K 6 HOH B 58 558 28 HOH HOH . K 6 HOH B 59 559 124 HOH HOH . K 6 HOH B 60 560 74 HOH HOH . K 6 HOH B 61 561 87 HOH HOH . K 6 HOH B 62 562 75 HOH HOH . K 6 HOH B 63 563 43 HOH HOH . K 6 HOH B 64 564 35 HOH HOH . K 6 HOH B 65 565 114 HOH HOH . K 6 HOH B 66 566 127 HOH HOH . K 6 HOH B 67 567 128 HOH HOH . K 6 HOH B 68 568 36 HOH HOH . K 6 HOH B 69 569 98 HOH HOH . K 6 HOH B 70 570 50 HOH HOH . K 6 HOH B 71 571 108 HOH HOH . K 6 HOH B 72 572 89 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BR _atom_site.label_atom_id BR _atom_site.label_comp_id BR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -38.102 _atom_site.Cartn_y -58.617 _atom_site.Cartn_z 7.897 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BR _atom_site.auth_comp_id BR _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #