data_5VZU # _model_server_result.job_id 4ArF-ucSwoLE_sKjIc-ztQ _model_server_result.datetime_utc '2024-10-28 02:41:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vzu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 5VZU # _exptl.entry_id 5VZU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.21 _cell.angle_gamma 90 _cell.entry_id 5VZU _cell.length_a 87.679 _cell.length_b 156.235 _cell.length_c 155.522 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VZU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H,I,J,K,L,S,T 1 1 C,D,F,M,N,O,P,Q,R,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 155 B CYS 206 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 B NE2 HIS 163 B HIS 214 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc3 B SG CYS 179 B CYS 230 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc4 B NE2 HIS 185 B HIS 236 1_555 G ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc5 D SG CYS 155 D CYS 206 1_555 M ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc6 D NE2 HIS 163 D HIS 214 1_555 M ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc7 D SG CYS 179 D CYS 230 1_555 M ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc8 D NE2 HIS 185 D HIS 236 1_555 M ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5VZU _atom_sites.fract_transf_matrix[1][1] 0.011405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002888 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006401 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN B 1 601 601 ZN ZN . H 5 PO4 B 1 602 1 PO4 PO4 . I 5 PO4 B 1 603 6 PO4 PO4 . J 5 PO4 B 1 604 7 PO4 PO4 . K 5 PO4 B 1 605 8 PO4 PO4 . L 5 PO4 B 1 606 9 PO4 PO4 . M 4 ZN D 1 601 601 ZN ZN . N 5 PO4 D 1 602 2 PO4 PO4 . O 5 PO4 D 1 603 3 PO4 PO4 . P 5 PO4 D 1 604 4 PO4 PO4 . Q 5 PO4 D 1 605 5 PO4 PO4 . R 5 PO4 D 1 606 10 PO4 PO4 . S 6 HOH A 1 1201 69 HOH HOH . S 6 HOH A 2 1202 64 HOH HOH . S 6 HOH A 3 1203 65 HOH HOH . S 6 HOH A 4 1204 56 HOH HOH . S 6 HOH A 5 1205 51 HOH HOH . S 6 HOH A 6 1206 55 HOH HOH . S 6 HOH A 7 1207 31 HOH HOH . S 6 HOH A 8 1208 22 HOH HOH . T 6 HOH B 1 701 15 HOH HOH . T 6 HOH B 2 702 23 HOH HOH . T 6 HOH B 3 703 39 HOH HOH . T 6 HOH B 4 704 54 HOH HOH . T 6 HOH B 5 705 29 HOH HOH . T 6 HOH B 6 706 43 HOH HOH . T 6 HOH B 7 707 41 HOH HOH . T 6 HOH B 8 708 14 HOH HOH . T 6 HOH B 9 709 36 HOH HOH . T 6 HOH B 10 710 47 HOH HOH . T 6 HOH B 11 711 19 HOH HOH . T 6 HOH B 12 712 27 HOH HOH . T 6 HOH B 13 713 34 HOH HOH . T 6 HOH B 14 714 45 HOH HOH . T 6 HOH B 15 715 40 HOH HOH . T 6 HOH B 16 716 58 HOH HOH . T 6 HOH B 17 717 30 HOH HOH . T 6 HOH B 18 718 68 HOH HOH . T 6 HOH B 19 719 32 HOH HOH . T 6 HOH B 20 720 59 HOH HOH . T 6 HOH B 21 721 44 HOH HOH . T 6 HOH B 22 722 28 HOH HOH . T 6 HOH B 23 723 37 HOH HOH . T 6 HOH B 24 724 71 HOH HOH . T 6 HOH B 25 725 18 HOH HOH . T 6 HOH B 26 726 67 HOH HOH . T 6 HOH B 27 727 60 HOH HOH . T 6 HOH B 28 728 53 HOH HOH . T 6 HOH B 29 729 61 HOH HOH . T 6 HOH B 30 730 66 HOH HOH . T 6 HOH B 31 731 57 HOH HOH . T 6 HOH B 32 732 35 HOH HOH . T 6 HOH B 33 733 50 HOH HOH . T 6 HOH B 34 734 13 HOH HOH . T 6 HOH B 35 735 24 HOH HOH . T 6 HOH B 36 736 52 HOH HOH . T 6 HOH B 37 737 49 HOH HOH . T 6 HOH B 38 738 26 HOH HOH . T 6 HOH B 39 739 20 HOH HOH . T 6 HOH B 40 740 16 HOH HOH . T 6 HOH B 41 741 72 HOH HOH . T 6 HOH B 42 742 62 HOH HOH . U 6 HOH D 1 701 70 HOH HOH . U 6 HOH D 2 702 48 HOH HOH . U 6 HOH D 3 703 63 HOH HOH . U 6 HOH D 4 704 38 HOH HOH . U 6 HOH D 5 705 42 HOH HOH . U 6 HOH D 6 706 46 HOH HOH . U 6 HOH D 7 707 33 HOH HOH . U 6 HOH D 8 708 11 HOH HOH . U 6 HOH D 9 709 12 HOH HOH . U 6 HOH D 10 710 17 HOH HOH . U 6 HOH D 11 711 25 HOH HOH . U 6 HOH D 12 712 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x -57.17 _atom_site.Cartn_y -18.818 _atom_site.Cartn_z 56.909 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #