data_5VZW # _model_server_result.job_id LmPmFjGMQtlLDwbsMedLhw _model_server_result.datetime_utc '2024-11-04 20:35:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5vzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 5VZW # _exptl.entry_id 5VZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5VZW _cell.length_a 52.83 _cell.length_b 109.355 _cell.length_c 122.963 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 31 F CYS 31 1_555 H ZN ZN . F ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc2 C SG CYS 34 F CYS 34 1_555 H ZN ZN . F ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc3 C SG CYS 51 F CYS 51 1_555 G ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc4 C ND1 HIS 53 F HIS 53 1_555 G ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc5 C SG CYS 56 F CYS 56 1_555 H ZN ZN . F ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc6 C SG CYS 59 F CYS 59 1_555 H ZN ZN . F ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc7 C SG CYS 72 F CYS 72 1_555 G ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc8 C OD2 ASP 75 F ASP 75 1_555 G ZN ZN . F ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc9 D SG CYS 31 G CYS 31 1_555 J ZN ZN . G ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc10 D SG CYS 34 G CYS 34 1_555 J ZN ZN . G ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc11 D SG CYS 51 G CYS 51 1_555 I ZN ZN . G ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc12 D ND1 HIS 53 G HIS 53 1_555 I ZN ZN . G ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc13 D SG CYS 56 G CYS 56 1_555 J ZN ZN . G ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc14 D SG CYS 59 G CYS 59 1_555 J ZN ZN . G ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc15 D SG CYS 72 G CYS 72 1_555 I ZN ZN . G ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc16 D OD2 ASP 75 G ASP 75 1_555 I ZN ZN . G ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5VZW _atom_sites.fract_transf_matrix[1][1] 0.018929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN F 1 301 301 ZN ZN . H 4 ZN F 1 302 201 ZN ZN . I 4 ZN G 1 301 301 ZN ZN . J 4 ZN G 1 302 201 ZN ZN . K 5 HOH A 1 201 49 HOH HOH . K 5 HOH A 2 202 58 HOH HOH . K 5 HOH A 3 203 36 HOH HOH . K 5 HOH A 4 204 55 HOH HOH . K 5 HOH A 5 205 9 HOH HOH . K 5 HOH A 6 206 54 HOH HOH . K 5 HOH A 7 207 52 HOH HOH . K 5 HOH A 8 208 41 HOH HOH . K 5 HOH A 9 209 37 HOH HOH . K 5 HOH A 10 210 46 HOH HOH . K 5 HOH A 11 211 40 HOH HOH . K 5 HOH A 12 212 66 HOH HOH . K 5 HOH A 13 213 67 HOH HOH . L 5 HOH C 1 101 39 HOH HOH . L 5 HOH C 2 102 29 HOH HOH . L 5 HOH C 3 103 12 HOH HOH . L 5 HOH C 4 104 42 HOH HOH . L 5 HOH C 5 105 33 HOH HOH . L 5 HOH C 6 106 17 HOH HOH . L 5 HOH C 7 107 24 HOH HOH . L 5 HOH C 8 108 68 HOH HOH . M 5 HOH F 1 401 14 HOH HOH . M 5 HOH F 2 402 19 HOH HOH . M 5 HOH F 3 403 35 HOH HOH . M 5 HOH F 4 404 23 HOH HOH . M 5 HOH F 5 405 1 HOH HOH . M 5 HOH F 6 406 18 HOH HOH . M 5 HOH F 7 407 27 HOH HOH . M 5 HOH F 8 408 59 HOH HOH . M 5 HOH F 9 409 45 HOH HOH . M 5 HOH F 10 410 44 HOH HOH . M 5 HOH F 11 411 50 HOH HOH . M 5 HOH F 12 412 7 HOH HOH . M 5 HOH F 13 413 26 HOH HOH . M 5 HOH F 14 414 34 HOH HOH . M 5 HOH F 15 415 32 HOH HOH . N 5 HOH G 1 401 4 HOH HOH . N 5 HOH G 2 402 20 HOH HOH . N 5 HOH G 3 403 21 HOH HOH . N 5 HOH G 4 404 31 HOH HOH . N 5 HOH G 5 405 3 HOH HOH . O 5 HOH B 1 201 11 HOH HOH . O 5 HOH B 2 202 5 HOH HOH . O 5 HOH B 3 203 10 HOH HOH . O 5 HOH B 4 204 16 HOH HOH . P 5 HOH D 1 101 13 HOH HOH . P 5 HOH D 2 102 6 HOH HOH . P 5 HOH D 3 103 28 HOH HOH . P 5 HOH D 4 104 2 HOH HOH . P 5 HOH D 5 105 30 HOH HOH . P 5 HOH D 6 106 64 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 10.732 _atom_site.Cartn_y 27.752 _atom_site.Cartn_z 11.668 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.66 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #