data_5W0G # _model_server_result.job_id Xat0x-dDyTaQCxj5FZQzmg _model_server_result.datetime_utc '2024-11-24 08:22:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w0g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5W0G # _exptl.entry_id 5W0G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 252.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W0G _cell.length_a 28.707 _cell.length_b 28.707 _cell.length_c 185.851 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W0G _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 20 A GLU 162 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A OE1 GLU 20 A GLU 162 1_555 B ZN ZN . A ZN 301 7_557 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc3 A OE2 GLU 21 A GLU 163 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc4 A OD2 ASP 25 A ASP 167 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc5 A O PRO 87 A PRO 229 1_555 C ZN ZN . A ZN 302 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc6 B ZN ZN . A ZN 301 1_555 F O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc7 B ZN ZN . A ZN 301 1_555 F O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc8 B ZN ZN . A ZN 301 1_555 F O HOH . A HOH 407 7_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc9 B ZN ZN . A ZN 301 1_555 F O HOH . A HOH 493 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc10 C ZN ZN . A ZN 302 1_555 F O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? metalc ? metalc11 C ZN ZN . A ZN 302 1_555 F O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? # _chem_comp.formula 'C11 H24 O6' _chem_comp.formula_weight 252.305 _chem_comp.id 1PG _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O1 1PG sing 1 n n C2 C3 1PG sing 2 n n C2 H21 1PG sing 3 n n C2 H22 1PG sing 4 n n C1 O1 1PG sing 5 n n C1 H11 1PG sing 6 n n C1 H12 1PG sing 7 n n C1 H13 1PG sing 8 n n O2 C3 1PG sing 9 n n O2 C4 1PG sing 10 n n C3 H31 1PG sing 11 n n C3 H32 1PG sing 12 n n C4 C5 1PG sing 13 n n C4 H41 1PG sing 14 n n C4 H42 1PG sing 15 n n C5 O3 1PG sing 16 n n C5 H51 1PG sing 17 n n C5 H52 1PG sing 18 n n O3 C6 1PG sing 19 n n C6 C7 1PG sing 20 n n C6 H61 1PG sing 21 n n C6 H62 1PG sing 22 n n C7 O4 1PG sing 23 n n C7 H71 1PG sing 24 n n C7 H72 1PG sing 25 n n O4 C8 1PG sing 26 n n C8 C9 1PG sing 27 n n C8 H81 1PG sing 28 n n C8 H82 1PG sing 29 n n C9 O5 1PG sing 30 n n C9 H91 1PG sing 31 n n C9 H92 1PG sing 32 n n O5 C10 1PG sing 33 n n C10 C11 1PG sing 34 n n C10 H101 1PG sing 35 n n C10 H102 1PG sing 36 n n C11 O6 1PG sing 37 n n C11 H111 1PG sing 38 n n C11 H112 1PG sing 39 n n O6 HO6 1PG sing 40 n n # _atom_sites.entry_id 5W0G _atom_sites.fract_transf_matrix[1][1] 0.034835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 3 ACT A 1 303 303 ACT ACT . E 4 1PG A 1 304 304 1PG 1PG . F 5 HOH A 1 401 401 HOH HOH . F 5 HOH A 2 402 402 HOH HOH . F 5 HOH A 3 403 403 HOH HOH . F 5 HOH A 4 404 404 HOH HOH . F 5 HOH A 5 405 405 HOH HOH . F 5 HOH A 6 406 406 HOH HOH . F 5 HOH A 7 407 407 HOH HOH . F 5 HOH A 8 408 408 HOH HOH . F 5 HOH A 9 409 409 HOH HOH . F 5 HOH A 10 410 410 HOH HOH . F 5 HOH A 11 411 411 HOH HOH . F 5 HOH A 12 412 412 HOH HOH . F 5 HOH A 13 413 413 HOH HOH . F 5 HOH A 14 414 414 HOH HOH . F 5 HOH A 15 415 415 HOH HOH . F 5 HOH A 16 416 416 HOH HOH . F 5 HOH A 17 417 417 HOH HOH . F 5 HOH A 18 418 418 HOH HOH . F 5 HOH A 19 419 419 HOH HOH . F 5 HOH A 20 420 420 HOH HOH . F 5 HOH A 21 421 421 HOH HOH . F 5 HOH A 22 422 422 HOH HOH . F 5 HOH A 23 423 423 HOH HOH . F 5 HOH A 24 424 424 HOH HOH . F 5 HOH A 25 425 425 HOH HOH . F 5 HOH A 26 426 426 HOH HOH . F 5 HOH A 27 427 427 HOH HOH . F 5 HOH A 28 428 428 HOH HOH . F 5 HOH A 29 429 429 HOH HOH . F 5 HOH A 30 430 430 HOH HOH . F 5 HOH A 31 431 431 HOH HOH . F 5 HOH A 32 432 432 HOH HOH . F 5 HOH A 33 433 433 HOH HOH . F 5 HOH A 34 434 434 HOH HOH . F 5 HOH A 35 435 435 HOH HOH . F 5 HOH A 36 436 436 HOH HOH . F 5 HOH A 37 437 437 HOH HOH . F 5 HOH A 38 438 438 HOH HOH . F 5 HOH A 39 439 439 HOH HOH . F 5 HOH A 40 440 440 HOH HOH . F 5 HOH A 41 441 441 HOH HOH . F 5 HOH A 42 442 442 HOH HOH . F 5 HOH A 43 443 443 HOH HOH . F 5 HOH A 44 444 444 HOH HOH . F 5 HOH A 45 445 445 HOH HOH . F 5 HOH A 46 446 446 HOH HOH . F 5 HOH A 47 447 447 HOH HOH . F 5 HOH A 48 448 448 HOH HOH . F 5 HOH A 49 449 449 HOH HOH . F 5 HOH A 50 450 450 HOH HOH . F 5 HOH A 51 451 451 HOH HOH . F 5 HOH A 52 452 452 HOH HOH . F 5 HOH A 53 453 453 HOH HOH . F 5 HOH A 54 454 454 HOH HOH . F 5 HOH A 55 455 455 HOH HOH . F 5 HOH A 56 456 456 HOH HOH . F 5 HOH A 57 457 457 HOH HOH . F 5 HOH A 58 458 528 HOH HOH . F 5 HOH A 59 459 458 HOH HOH . F 5 HOH A 60 460 459 HOH HOH . F 5 HOH A 61 461 460 HOH HOH . F 5 HOH A 62 462 461 HOH HOH . F 5 HOH A 63 463 462 HOH HOH . F 5 HOH A 64 464 463 HOH HOH . F 5 HOH A 65 465 465 HOH HOH . F 5 HOH A 66 466 466 HOH HOH . F 5 HOH A 67 467 467 HOH HOH . F 5 HOH A 68 468 468 HOH HOH . F 5 HOH A 69 469 469 HOH HOH . F 5 HOH A 70 470 470 HOH HOH . F 5 HOH A 71 471 471 HOH HOH . F 5 HOH A 72 472 472 HOH HOH . F 5 HOH A 73 473 473 HOH HOH . F 5 HOH A 74 474 474 HOH HOH . F 5 HOH A 75 475 475 HOH HOH . F 5 HOH A 76 476 476 HOH HOH . F 5 HOH A 77 477 477 HOH HOH . F 5 HOH A 78 478 478 HOH HOH . F 5 HOH A 79 479 479 HOH HOH . F 5 HOH A 80 480 480 HOH HOH . F 5 HOH A 81 481 481 HOH HOH . F 5 HOH A 82 482 532 HOH HOH . F 5 HOH A 83 483 482 HOH HOH . F 5 HOH A 84 484 483 HOH HOH . F 5 HOH A 85 485 484 HOH HOH . F 5 HOH A 86 486 508 HOH HOH . F 5 HOH A 87 487 485 HOH HOH . F 5 HOH A 88 488 486 HOH HOH . F 5 HOH A 89 489 487 HOH HOH . F 5 HOH A 90 490 488 HOH HOH . F 5 HOH A 91 491 489 HOH HOH . F 5 HOH A 92 492 490 HOH HOH . F 5 HOH A 93 493 491 HOH HOH . F 5 HOH A 94 494 492 HOH HOH . F 5 HOH A 95 495 493 HOH HOH . F 5 HOH A 96 496 494 HOH HOH . F 5 HOH A 97 497 495 HOH HOH . F 5 HOH A 98 498 496 HOH HOH . F 5 HOH A 99 499 497 HOH HOH . F 5 HOH A 100 500 498 HOH HOH . F 5 HOH A 101 501 499 HOH HOH . F 5 HOH A 102 502 500 HOH HOH . F 5 HOH A 103 503 501 HOH HOH . F 5 HOH A 104 504 502 HOH HOH . F 5 HOH A 105 505 503 HOH HOH . F 5 HOH A 106 506 504 HOH HOH . F 5 HOH A 107 507 505 HOH HOH . F 5 HOH A 108 508 506 HOH HOH . F 5 HOH A 109 509 507 HOH HOH . F 5 HOH A 110 510 509 HOH HOH . F 5 HOH A 111 511 527 HOH HOH . F 5 HOH A 112 512 510 HOH HOH . F 5 HOH A 113 513 511 HOH HOH . F 5 HOH A 114 514 512 HOH HOH . F 5 HOH A 115 515 513 HOH HOH . F 5 HOH A 116 516 514 HOH HOH . F 5 HOH A 117 517 515 HOH HOH . F 5 HOH A 118 518 516 HOH HOH . F 5 HOH A 119 519 517 HOH HOH . F 5 HOH A 120 520 518 HOH HOH . F 5 HOH A 121 521 519 HOH HOH . F 5 HOH A 122 522 520 HOH HOH . F 5 HOH A 123 523 521 HOH HOH . F 5 HOH A 124 524 530 HOH HOH . F 5 HOH A 125 525 522 HOH HOH . F 5 HOH A 126 526 523 HOH HOH . F 5 HOH A 127 527 524 HOH HOH . F 5 HOH A 128 528 525 HOH HOH . F 5 HOH A 129 529 526 HOH HOH . F 5 HOH A 130 530 464 HOH HOH . F 5 HOH A 131 531 529 HOH HOH . F 5 HOH A 132 532 531 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 1PG . . . E 4 13.618 -14.956 207.117 1 22.41 ? C2 1PG 304 A 1 HETATM 2 C C1 1PG . . . E 4 14.451 -16.635 208.438 1 17.66 ? C1 1PG 304 A 1 HETATM 3 O O1 1PG . . . E 4 14.593 -15.946 207.235 1 27.54 ? O1 1PG 304 A 1 HETATM 4 O O2 1PG . . . E 4 12.544 -13.354 205.988 1 35.72 ? O2 1PG 304 A 1 HETATM 5 C C3 1PG . . . E 4 13.552 -14.285 205.765 1 19.63 ? C3 1PG 304 A 1 HETATM 6 C C4 1PG . . . E 4 11.746 -13.122 204.904 1 32.53 ? C4 1PG 304 A 1 HETATM 7 C C5 1PG . . . E 4 12.699 -12.641 203.838 1 21.11 ? C5 1PG 304 A 1 HETATM 8 O O3 1PG . . . E 4 13.67 -11.772 204.357 1 22.56 ? O3 1PG 304 A 1 HETATM 9 C C6 1PG . . . E 4 14.384 -11.191 203.301 1 22.68 ? C6 1PG 304 A 1 HETATM 10 C C7 1PG . . . E 4 15.12 -9.936 203.763 1 25.09 ? C7 1PG 304 A 1 HETATM 11 O O4 1PG . . . E 4 14.195 -8.943 204.11 1 28.21 ? O4 1PG 304 A 1 HETATM 12 C C8 1PG . . . E 4 14.766 -7.759 204.594 1 30.59 ? C8 1PG 304 A 1 HETATM 13 C C9 1PG . . . E 4 13.667 -6.723 204.819 1 33.9 ? C9 1PG 304 A 1 HETATM 14 O O5 1PG . . . E 4 12.877 -7.116 205.901 1 38.86 ? O5 1PG 304 A 1 HETATM 15 C C10 1PG . . . E 4 11.771 -6.295 206.164 1 37.9 ? C10 1PG 304 A 1 HETATM 16 C C11 1PG . . . E 4 10.658 -6.594 205.161 1 39.32 ? C11 1PG 304 A 1 HETATM 17 O O6 1PG . . . E 4 9.478 -6.955 205.823 1 41.67 ? O6 1PG 304 A 1 HETATM 18 H H21 1PG . . . E 4 12.748 -15.35 207.287 1 26.89 ? H21 1PG 304 A 1 HETATM 19 H H22 1PG . . . E 4 13.786 -14.277 207.789 1 26.89 ? H22 1PG 304 A 1 HETATM 20 H H11 1PG . . . E 4 14.495 -17.586 208.261 1 21.19 ? H11 1PG 304 A 1 HETATM 21 H H12 1PG . . . E 4 13.603 -16.421 208.857 1 21.19 ? H12 1PG 304 A 1 HETATM 22 H H13 1PG . . . E 4 15.172 -16.391 209.037 1 21.19 ? H13 1PG 304 A 1 HETATM 23 H H31 1PG . . . E 4 14.392 -13.854 205.547 1 23.55 ? H31 1PG 304 A 1 HETATM 24 H H32 1PG . . . E 4 13.29 -14.923 205.084 1 23.55 ? H32 1PG 304 A 1 HETATM 25 H H41 1PG . . . E 4 11.307 -13.94 204.636 1 39.03 ? H41 1PG 304 A 1 HETATM 26 H H42 1PG . . . E 4 11.091 -12.436 205.107 1 39.03 ? H42 1PG 304 A 1 HETATM 27 H H51 1PG . . . E 4 13.132 -13.396 203.409 1 25.34 ? H51 1PG 304 A 1 HETATM 28 H H52 1PG . . . E 4 12.177 -12.169 203.171 1 25.34 ? H52 1PG 304 A 1 HETATM 29 H H61 1PG . . . E 4 15.03 -11.832 202.965 1 27.21 ? H61 1PG 304 A 1 HETATM 30 H H62 1PG . . . E 4 13.777 -10.948 202.585 1 27.21 ? H62 1PG 304 A 1 HETATM 31 H H71 1PG . . . E 4 15.668 -10.15 204.534 1 30.11 ? H71 1PG 304 A 1 HETATM 32 H H72 1PG . . . E 4 15.686 -9.612 203.045 1 30.11 ? H72 1PG 304 A 1 HETATM 33 H H81 1PG . . . E 4 15.219 -7.937 205.433 1 36.71 ? H81 1PG 304 A 1 HETATM 34 H H82 1PG . . . E 4 15.404 -7.419 203.947 1 36.71 ? H82 1PG 304 A 1 HETATM 35 H H91 1PG . . . E 4 14.069 -5.861 205.009 1 40.67 ? H91 1PG 304 A 1 HETATM 36 H H92 1PG . . . E 4 13.119 -6.656 204.021 1 40.67 ? H92 1PG 304 A 1 HETATM 37 H H101 1PG . . . E 4 11.449 -6.465 207.063 1 45.48 ? H101 1PG 304 A 1 HETATM 38 H H102 1PG . . . E 4 12.034 -5.365 206.086 1 45.48 ? H102 1PG 304 A 1 HETATM 39 H H111 1PG . . . E 4 10.932 -7.312 204.572 1 47.19 ? H111 1PG 304 A 1 HETATM 40 H H112 1PG . . . E 4 10.489 -5.798 204.637 1 47.19 ? H112 1PG 304 A 1 HETATM 41 H HO6 1PG . . . E 4 8.865 -7.096 205.252 1 50 ? HO6 1PG 304 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 41 #