data_5W0R # _model_server_result.job_id BaBvAUzT900JSiiBRzj-Dw _model_server_result.datetime_utc '2024-11-22 15:28:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w0r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2003}' # _entry.id 5W0R # _exptl.entry_id 5W0R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W0R _cell.length_a 36.96 _cell.length_b 179.07 _cell.length_c 188.08 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W0R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 367 B THR 367 1_555 E CA CA . B CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc2 A O ALA 370 B ALA 370 1_555 E CA CA . B CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc3 A ND1 HIS 424 B HIS 1056 1_555 C ZN ZN . B ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc4 A SG CYS 455 B CYS 1087 1_555 C ZN ZN . B ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc5 A SG CYS 458 B CYS 1090 1_555 C ZN ZN . B ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 C ZN ZN . B ZN 2001 1_555 D O1 CAC . B CAC 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc7 E CA CA . B CA 2003 1_555 I O HOH . B HOH 2155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc8 E CA CA . B CA 2003 1_555 I O HOH . B HOH 2160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc9 B O ALA 370 A ALA 370 1_555 H CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.127 ? metalc ? metalc10 B O PHE 414 A PHE 1046 1_555 H CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? metalc ? metalc11 B ND1 HIS 424 A HIS 1056 1_555 F ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc12 B SG CYS 455 A CYS 1087 1_555 F ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc13 B SG CYS 458 A CYS 1090 1_555 F ZN ZN . A ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc14 F ZN ZN . A ZN 2001 1_555 G O1 CAC . A CAC 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W0R _atom_sites.fract_transf_matrix[1][1] 0.027056 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005584 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN B 1 2001 2001 ZN ZN . D 3 CAC B 1 2002 3001 CAC CAC . E 4 CA B 1 2003 4001 CA CA . F 2 ZN A 1 2001 2001 ZN ZN . G 3 CAC A 1 2002 3001 CAC CAC . H 4 CA A 1 2003 4001 CA CA . I 5 HOH B 1 2101 146 HOH HOH . I 5 HOH B 2 2102 108 HOH HOH . I 5 HOH B 3 2103 58 HOH HOH . I 5 HOH B 4 2104 101 HOH HOH . I 5 HOH B 5 2105 60 HOH HOH . I 5 HOH B 6 2106 95 HOH HOH . I 5 HOH B 7 2107 162 HOH HOH . I 5 HOH B 8 2108 80 HOH HOH . I 5 HOH B 9 2109 88 HOH HOH . I 5 HOH B 10 2110 151 HOH HOH . I 5 HOH B 11 2111 40 HOH HOH . I 5 HOH B 12 2112 13 HOH HOH . I 5 HOH B 13 2113 25 HOH HOH . I 5 HOH B 14 2114 4 HOH HOH . I 5 HOH B 15 2115 43 HOH HOH . I 5 HOH B 16 2116 56 HOH HOH . I 5 HOH B 17 2117 183 HOH HOH . I 5 HOH B 18 2118 174 HOH HOH . I 5 HOH B 19 2119 142 HOH HOH . I 5 HOH B 20 2120 59 HOH HOH . I 5 HOH B 21 2121 32 HOH HOH . I 5 HOH B 22 2122 47 HOH HOH . I 5 HOH B 23 2123 1 HOH HOH . I 5 HOH B 24 2124 54 HOH HOH . I 5 HOH B 25 2125 28 HOH HOH . I 5 HOH B 26 2126 7 HOH HOH . I 5 HOH B 27 2127 2 HOH HOH . I 5 HOH B 28 2128 135 HOH HOH . I 5 HOH B 29 2129 5 HOH HOH . I 5 HOH B 30 2130 12 HOH HOH . I 5 HOH B 31 2131 10 HOH HOH . I 5 HOH B 32 2132 155 HOH HOH . I 5 HOH B 33 2133 34 HOH HOH . I 5 HOH B 34 2134 113 HOH HOH . I 5 HOH B 35 2135 132 HOH HOH . I 5 HOH B 36 2136 181 HOH HOH . I 5 HOH B 37 2137 27 HOH HOH . I 5 HOH B 38 2138 131 HOH HOH . I 5 HOH B 39 2139 8 HOH HOH . I 5 HOH B 40 2140 178 HOH HOH . I 5 HOH B 41 2141 110 HOH HOH . I 5 HOH B 42 2142 18 HOH HOH . I 5 HOH B 43 2143 74 HOH HOH . I 5 HOH B 44 2144 187 HOH HOH . I 5 HOH B 45 2145 89 HOH HOH . I 5 HOH B 46 2146 38 HOH HOH . I 5 HOH B 47 2147 53 HOH HOH . I 5 HOH B 48 2148 102 HOH HOH . I 5 HOH B 49 2149 90 HOH HOH . I 5 HOH B 50 2150 98 HOH HOH . I 5 HOH B 51 2151 63 HOH HOH . I 5 HOH B 52 2152 79 HOH HOH . I 5 HOH B 53 2153 152 HOH HOH . I 5 HOH B 54 2154 173 HOH HOH . I 5 HOH B 55 2155 176 HOH HOH . I 5 HOH B 56 2156 64 HOH HOH . I 5 HOH B 57 2157 121 HOH HOH . I 5 HOH B 58 2158 182 HOH HOH . I 5 HOH B 59 2159 76 HOH HOH . I 5 HOH B 60 2160 44 HOH HOH . I 5 HOH B 61 2161 61 HOH HOH . I 5 HOH B 62 2162 49 HOH HOH . I 5 HOH B 63 2163 83 HOH HOH . I 5 HOH B 64 2164 116 HOH HOH . I 5 HOH B 65 2165 99 HOH HOH . I 5 HOH B 66 2166 33 HOH HOH . I 5 HOH B 67 2167 180 HOH HOH . I 5 HOH B 68 2168 179 HOH HOH . I 5 HOH B 69 2169 14 HOH HOH . I 5 HOH B 70 2170 194 HOH HOH . I 5 HOH B 71 2171 19 HOH HOH . I 5 HOH B 72 2172 22 HOH HOH . I 5 HOH B 73 2173 106 HOH HOH . I 5 HOH B 74 2174 51 HOH HOH . I 5 HOH B 75 2175 169 HOH HOH . I 5 HOH B 76 2176 125 HOH HOH . I 5 HOH B 77 2177 157 HOH HOH . I 5 HOH B 78 2178 57 HOH HOH . I 5 HOH B 79 2179 66 HOH HOH . I 5 HOH B 80 2180 50 HOH HOH . I 5 HOH B 81 2181 170 HOH HOH . I 5 HOH B 82 2182 20 HOH HOH . I 5 HOH B 83 2183 163 HOH HOH . I 5 HOH B 84 2184 126 HOH HOH . I 5 HOH B 85 2185 156 HOH HOH . I 5 HOH B 86 2186 189 HOH HOH . I 5 HOH B 87 2187 175 HOH HOH . I 5 HOH B 88 2188 96 HOH HOH . I 5 HOH B 89 2189 87 HOH HOH . I 5 HOH B 90 2190 136 HOH HOH . I 5 HOH B 91 2191 65 HOH HOH . I 5 HOH B 92 2192 144 HOH HOH . I 5 HOH B 93 2193 100 HOH HOH . I 5 HOH B 94 2194 143 HOH HOH . I 5 HOH B 95 2195 153 HOH HOH . I 5 HOH B 96 2196 68 HOH HOH . I 5 HOH B 97 2197 148 HOH HOH . I 5 HOH B 98 2198 124 HOH HOH . I 5 HOH B 99 2199 158 HOH HOH . I 5 HOH B 100 2200 75 HOH HOH . I 5 HOH B 101 2201 171 HOH HOH . I 5 HOH B 102 2202 172 HOH HOH . I 5 HOH B 103 2203 31 HOH HOH . I 5 HOH B 104 2204 188 HOH HOH . I 5 HOH B 105 2205 112 HOH HOH . J 5 HOH A 1 2101 130 HOH HOH . J 5 HOH A 2 2102 42 HOH HOH . J 5 HOH A 3 2103 193 HOH HOH . J 5 HOH A 4 2104 77 HOH HOH . J 5 HOH A 5 2105 82 HOH HOH . J 5 HOH A 6 2106 26 HOH HOH . J 5 HOH A 7 2107 15 HOH HOH . J 5 HOH A 8 2108 161 HOH HOH . J 5 HOH A 9 2109 85 HOH HOH . J 5 HOH A 10 2110 21 HOH HOH . J 5 HOH A 11 2111 134 HOH HOH . J 5 HOH A 12 2112 140 HOH HOH . J 5 HOH A 13 2113 154 HOH HOH . J 5 HOH A 14 2114 55 HOH HOH . J 5 HOH A 15 2115 35 HOH HOH . J 5 HOH A 16 2116 94 HOH HOH . J 5 HOH A 17 2117 184 HOH HOH . J 5 HOH A 18 2118 45 HOH HOH . J 5 HOH A 19 2119 9 HOH HOH . J 5 HOH A 20 2120 36 HOH HOH . J 5 HOH A 21 2121 159 HOH HOH . J 5 HOH A 22 2122 97 HOH HOH . J 5 HOH A 23 2123 93 HOH HOH . J 5 HOH A 24 2124 3 HOH HOH . J 5 HOH A 25 2125 137 HOH HOH . J 5 HOH A 26 2126 138 HOH HOH . J 5 HOH A 27 2127 16 HOH HOH . J 5 HOH A 28 2128 160 HOH HOH . J 5 HOH A 29 2129 72 HOH HOH . J 5 HOH A 30 2130 48 HOH HOH . J 5 HOH A 31 2131 6 HOH HOH . J 5 HOH A 32 2132 71 HOH HOH . J 5 HOH A 33 2133 92 HOH HOH . J 5 HOH A 34 2134 149 HOH HOH . J 5 HOH A 35 2135 86 HOH HOH . J 5 HOH A 36 2136 81 HOH HOH . J 5 HOH A 37 2137 30 HOH HOH . J 5 HOH A 38 2138 11 HOH HOH . J 5 HOH A 39 2139 37 HOH HOH . J 5 HOH A 40 2140 191 HOH HOH . J 5 HOH A 41 2141 109 HOH HOH . J 5 HOH A 42 2142 192 HOH HOH . J 5 HOH A 43 2143 29 HOH HOH . J 5 HOH A 44 2144 127 HOH HOH . J 5 HOH A 45 2145 133 HOH HOH . J 5 HOH A 46 2146 62 HOH HOH . J 5 HOH A 47 2147 91 HOH HOH . J 5 HOH A 48 2148 41 HOH HOH . J 5 HOH A 49 2149 111 HOH HOH . J 5 HOH A 50 2150 67 HOH HOH . J 5 HOH A 51 2151 168 HOH HOH . J 5 HOH A 52 2152 147 HOH HOH . J 5 HOH A 53 2153 122 HOH HOH . J 5 HOH A 54 2154 167 HOH HOH . J 5 HOH A 55 2155 23 HOH HOH . J 5 HOH A 56 2156 145 HOH HOH . J 5 HOH A 57 2157 107 HOH HOH . J 5 HOH A 58 2158 129 HOH HOH . J 5 HOH A 59 2159 139 HOH HOH . J 5 HOH A 60 2160 117 HOH HOH . J 5 HOH A 61 2161 46 HOH HOH . J 5 HOH A 62 2162 69 HOH HOH . J 5 HOH A 63 2163 104 HOH HOH . J 5 HOH A 64 2164 70 HOH HOH . J 5 HOH A 65 2165 24 HOH HOH . J 5 HOH A 66 2166 185 HOH HOH . J 5 HOH A 67 2167 17 HOH HOH . J 5 HOH A 68 2168 177 HOH HOH . J 5 HOH A 69 2169 166 HOH HOH . J 5 HOH A 70 2170 165 HOH HOH . J 5 HOH A 71 2171 120 HOH HOH . J 5 HOH A 72 2172 115 HOH HOH . J 5 HOH A 73 2173 128 HOH HOH . J 5 HOH A 74 2174 141 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.882 _atom_site.Cartn_y -38.13 _atom_site.Cartn_z 77.524 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 77.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 2003 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #