data_5W2H # _model_server_result.job_id 4zsz4sWN-FtHXhr8TvFdZg _model_server_result.datetime_utc '2024-11-17 00:43:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 5W2H # _exptl.entry_id 5W2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W2H _cell.length_a 78.015 _cell.length_b 78.015 _cell.length_c 85.915 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 226 A ASP 385 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc2 A OD1 ASP 226 A ASP 385 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc3 A OD2 ASP 226 A ASP 385 1_555 C MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc4 B MG MG . A MG 701 1_555 D O2A ADP . A ADP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc5 B MG MG . A MG 701 1_555 D O3B ADP . A ADP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc6 B MG MG . A MG 701 1_555 G O HOH . A HOH 854 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc7 B MG MG . A MG 701 1_555 G O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc8 B MG MG . A MG 701 1_555 G O HOH . A HOH 925 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc9 C MG MG . A MG 702 1_555 D O1B ADP . A ADP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc10 C MG MG . A MG 702 1_555 G O HOH . A HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? metalc ? metalc11 C MG MG . A MG 702 1_555 G O HOH . A HOH 849 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc12 C MG MG . A MG 702 1_555 G O HOH . A HOH 859 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc13 C MG MG . A MG 702 1_555 G O HOH . A HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 343 n n P O2 PO4 sing 344 n n P O3 PO4 sing 345 n n P O4 PO4 sing 346 n n # _atom_sites.entry_id 5W2H _atom_sites.fract_transf_matrix[1][1] 0.012818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 501 MG MG . C 2 MG A 1 702 502 MG MG . D 3 ADP A 1 703 1001 ADP ADP . E 4 I3P A 1 704 1002 I3P I3P . F 5 PO4 A 1 705 601 PO4 PO4 . G 6 HOH A 1 800 157 HOH HOH . G 6 HOH A 2 801 101 HOH HOH . G 6 HOH A 3 802 61 HOH HOH . G 6 HOH A 4 803 155 HOH HOH . G 6 HOH A 5 804 93 HOH HOH . G 6 HOH A 6 805 132 HOH HOH . G 6 HOH A 7 806 116 HOH HOH . G 6 HOH A 8 807 161 HOH HOH . G 6 HOH A 9 808 84 HOH HOH . G 6 HOH A 10 809 108 HOH HOH . G 6 HOH A 11 810 154 HOH HOH . G 6 HOH A 12 811 69 HOH HOH . G 6 HOH A 13 812 45 HOH HOH . G 6 HOH A 14 813 128 HOH HOH . G 6 HOH A 15 814 83 HOH HOH . G 6 HOH A 16 815 37 HOH HOH . G 6 HOH A 17 816 21 HOH HOH . G 6 HOH A 18 817 34 HOH HOH . G 6 HOH A 19 818 6 HOH HOH . G 6 HOH A 20 819 106 HOH HOH . G 6 HOH A 21 820 135 HOH HOH . G 6 HOH A 22 821 149 HOH HOH . G 6 HOH A 23 822 166 HOH HOH . G 6 HOH A 24 823 38 HOH HOH . G 6 HOH A 25 824 126 HOH HOH . G 6 HOH A 26 825 87 HOH HOH . G 6 HOH A 27 826 97 HOH HOH . G 6 HOH A 28 827 68 HOH HOH . G 6 HOH A 29 828 57 HOH HOH . G 6 HOH A 30 829 52 HOH HOH . G 6 HOH A 31 830 35 HOH HOH . G 6 HOH A 32 831 99 HOH HOH . G 6 HOH A 33 832 89 HOH HOH . G 6 HOH A 34 833 112 HOH HOH . G 6 HOH A 35 834 3 HOH HOH . G 6 HOH A 36 835 59 HOH HOH . G 6 HOH A 37 836 56 HOH HOH . G 6 HOH A 38 837 47 HOH HOH . G 6 HOH A 39 838 105 HOH HOH . G 6 HOH A 40 839 121 HOH HOH . G 6 HOH A 41 840 109 HOH HOH . G 6 HOH A 42 841 25 HOH HOH . G 6 HOH A 43 842 94 HOH HOH . G 6 HOH A 44 843 11 HOH HOH . G 6 HOH A 45 844 71 HOH HOH . G 6 HOH A 46 845 24 HOH HOH . G 6 HOH A 47 846 66 HOH HOH . G 6 HOH A 48 847 118 HOH HOH . G 6 HOH A 49 848 55 HOH HOH . G 6 HOH A 50 849 152 HOH HOH . G 6 HOH A 51 850 120 HOH HOH . G 6 HOH A 52 851 23 HOH HOH . G 6 HOH A 53 852 123 HOH HOH . G 6 HOH A 54 853 42 HOH HOH . G 6 HOH A 55 854 88 HOH HOH . G 6 HOH A 56 855 20 HOH HOH . G 6 HOH A 57 856 72 HOH HOH . G 6 HOH A 58 857 78 HOH HOH . G 6 HOH A 59 858 142 HOH HOH . G 6 HOH A 60 859 133 HOH HOH . G 6 HOH A 61 860 16 HOH HOH . G 6 HOH A 62 861 117 HOH HOH . G 6 HOH A 63 862 127 HOH HOH . G 6 HOH A 64 863 27 HOH HOH . G 6 HOH A 65 864 39 HOH HOH . G 6 HOH A 66 865 134 HOH HOH . G 6 HOH A 67 866 31 HOH HOH . G 6 HOH A 68 867 80 HOH HOH . G 6 HOH A 69 868 1 HOH HOH . G 6 HOH A 70 869 168 HOH HOH . G 6 HOH A 71 870 58 HOH HOH . G 6 HOH A 72 871 122 HOH HOH . G 6 HOH A 73 872 18 HOH HOH . G 6 HOH A 74 873 9 HOH HOH . G 6 HOH A 75 874 98 HOH HOH . G 6 HOH A 76 875 51 HOH HOH . G 6 HOH A 77 876 100 HOH HOH . G 6 HOH A 78 877 131 HOH HOH . G 6 HOH A 79 878 141 HOH HOH . G 6 HOH A 80 879 107 HOH HOH . G 6 HOH A 81 880 5 HOH HOH . G 6 HOH A 82 881 4 HOH HOH . G 6 HOH A 83 882 46 HOH HOH . G 6 HOH A 84 883 81 HOH HOH . G 6 HOH A 85 884 12 HOH HOH . G 6 HOH A 86 885 110 HOH HOH . G 6 HOH A 87 886 143 HOH HOH . G 6 HOH A 88 887 145 HOH HOH . G 6 HOH A 89 888 13 HOH HOH . G 6 HOH A 90 889 28 HOH HOH . G 6 HOH A 91 890 2 HOH HOH . G 6 HOH A 92 891 148 HOH HOH . G 6 HOH A 93 892 64 HOH HOH . G 6 HOH A 94 893 70 HOH HOH . G 6 HOH A 95 894 7 HOH HOH . G 6 HOH A 96 895 125 HOH HOH . G 6 HOH A 97 896 76 HOH HOH . G 6 HOH A 98 897 33 HOH HOH . G 6 HOH A 99 898 10 HOH HOH . G 6 HOH A 100 899 41 HOH HOH . G 6 HOH A 101 900 136 HOH HOH . G 6 HOH A 102 901 50 HOH HOH . G 6 HOH A 103 902 44 HOH HOH . G 6 HOH A 104 903 90 HOH HOH . G 6 HOH A 105 904 85 HOH HOH . G 6 HOH A 106 905 96 HOH HOH . G 6 HOH A 107 906 36 HOH HOH . G 6 HOH A 108 907 14 HOH HOH . G 6 HOH A 109 908 137 HOH HOH . G 6 HOH A 110 909 26 HOH HOH . G 6 HOH A 111 910 129 HOH HOH . G 6 HOH A 112 911 17 HOH HOH . G 6 HOH A 113 912 164 HOH HOH . G 6 HOH A 114 913 22 HOH HOH . G 6 HOH A 115 914 8 HOH HOH . G 6 HOH A 116 915 75 HOH HOH . G 6 HOH A 117 916 170 HOH HOH . G 6 HOH A 118 917 32 HOH HOH . G 6 HOH A 119 918 15 HOH HOH . G 6 HOH A 120 919 153 HOH HOH . G 6 HOH A 121 920 49 HOH HOH . G 6 HOH A 122 921 144 HOH HOH . G 6 HOH A 123 922 40 HOH HOH . G 6 HOH A 124 923 159 HOH HOH . G 6 HOH A 125 924 172 HOH HOH . G 6 HOH A 126 925 63 HOH HOH . G 6 HOH A 127 926 60 HOH HOH . G 6 HOH A 128 927 77 HOH HOH . G 6 HOH A 129 928 29 HOH HOH . G 6 HOH A 130 929 95 HOH HOH . G 6 HOH A 131 930 171 HOH HOH . G 6 HOH A 132 931 86 HOH HOH . G 6 HOH A 133 932 43 HOH HOH . G 6 HOH A 134 933 115 HOH HOH . G 6 HOH A 135 934 140 HOH HOH . G 6 HOH A 136 935 19 HOH HOH . G 6 HOH A 137 936 54 HOH HOH . G 6 HOH A 138 937 130 HOH HOH . G 6 HOH A 139 938 67 HOH HOH . G 6 HOH A 140 939 114 HOH HOH . G 6 HOH A 141 940 82 HOH HOH . G 6 HOH A 142 941 102 HOH HOH . G 6 HOH A 143 942 62 HOH HOH . G 6 HOH A 144 943 160 HOH HOH . G 6 HOH A 145 944 30 HOH HOH . G 6 HOH A 146 945 139 HOH HOH . G 6 HOH A 147 946 151 HOH HOH . G 6 HOH A 148 947 124 HOH HOH . G 6 HOH A 149 948 165 HOH HOH . G 6 HOH A 150 949 104 HOH HOH . G 6 HOH A 151 950 91 HOH HOH . G 6 HOH A 152 951 74 HOH HOH . G 6 HOH A 153 952 119 HOH HOH . G 6 HOH A 154 953 53 HOH HOH . G 6 HOH A 155 954 92 HOH HOH . G 6 HOH A 156 955 150 HOH HOH . G 6 HOH A 157 956 167 HOH HOH . G 6 HOH A 158 957 162 HOH HOH . G 6 HOH A 159 958 163 HOH HOH . G 6 HOH A 160 959 48 HOH HOH . G 6 HOH A 161 960 138 HOH HOH . G 6 HOH A 162 961 113 HOH HOH . G 6 HOH A 163 962 158 HOH HOH . G 6 HOH A 164 963 111 HOH HOH . G 6 HOH A 165 964 147 HOH HOH . G 6 HOH A 166 965 169 HOH HOH . G 6 HOH A 167 966 103 HOH HOH . G 6 HOH A 168 967 73 HOH HOH . G 6 HOH A 169 968 65 HOH HOH . G 6 HOH A 170 969 79 HOH HOH . G 6 HOH A 171 970 146 HOH HOH . G 6 HOH A 172 971 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 5 15.777 15.893 42.328 0.5 86.78 ? P PO4 705 A 1 HETATM 2 O O1 PO4 . . . F 5 16.604 15.051 41.324 1 142.35 ? O1 PO4 705 A 1 HETATM 3 O O2 PO4 . . . F 5 14.866 16.952 41.649 1 84.71 ? O2 PO4 705 A 1 HETATM 4 O O3 PO4 . . . F 5 16.773 16.685 43.145 0.5 198.41 ? O3 PO4 705 A 1 HETATM 5 O O4 PO4 . . . F 5 14.882 14.902 42.968 0.5 63.31 ? O4 PO4 705 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #