data_5W2L # _model_server_result.job_id 4k0lOxBh0zrNOfugMArsWw _model_server_result.datetime_utc '2024-10-19 19:37:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 5W2L # _exptl.entry_id 5W2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W2L _cell.length_a 47.537 _cell.length_b 50.776 _cell.length_c 144.538 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 726 1_555 D HG HG . A HG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc2 A NE2 HIS 14 A HIS 726 1_555 G HG HG . B HG 902 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc3 A NE2 HIS 25 A HIS 737 1_555 E HG HG . A HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc4 A NE2 HIS 25 A HIS 737 1_555 H HG HG . B HG 903 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 A OE1 GLU 27 A GLU 739 1_555 E HG HG . A HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc6 A OE2 GLU 27 A GLU 739 1_555 E HG HG . A HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc7 A OE2 GLU 27 A GLU 739 1_555 H HG HG . B HG 903 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc8 A OE1 GLU 65 A GLU 777 1_555 D HG HG . A HG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc9 A OE1 GLU 65 A GLU 777 1_555 G HG HG . B HG 902 4_566 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc10 A ND1 HIS 85 A HIS 797 1_555 C HG HG . A HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc11 A SG CYS 136 A CYS 848 1_555 C HG HG . A HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc12 A O SER 138 A SER 850 1_555 C HG HG . A HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc13 A SG CYS 139 A CYS 851 1_555 C HG HG . A HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? metalc ? metalc14 D HG HG . A HG 902 4_466 B ND1 HIS 25 B HIS 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc15 E HG HG . A HG 903 3_655 B NE2 HIS 14 B HIS 726 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc16 E HG HG . A HG 903 3_655 B OE1 GLU 65 B GLU 777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc17 B NE2 HIS 14 B HIS 726 1_555 H HG HG . B HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc18 B ND1 HIS 25 B HIS 737 1_555 G HG HG . B HG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc19 B OE1 GLU 65 B GLU 777 1_555 H HG HG . B HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.106 ? metalc ? metalc20 B OE2 GLU 65 B GLU 777 1_555 H HG HG . B HG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc21 B ND1 HIS 85 B HIS 797 1_555 F HG HG . B HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc22 B O SER 138 B SER 850 1_555 F HG HG . B HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc23 B SG CYS 139 B CYS 851 1_555 F HG HG . B HG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W2L _atom_sites.fract_transf_matrix[1][1] 0.021036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG A 1 901 1 HG HG . D 2 HG A 1 902 2 HG HG . E 2 HG A 1 903 3 HG HG . F 2 HG B 1 901 4 HG HG . G 2 HG B 1 902 5 HG HG . H 2 HG B 1 903 6 HG HG . I 3 HOH A 1 1001 29 HOH HOH . I 3 HOH A 2 1002 17 HOH HOH . I 3 HOH A 3 1003 26 HOH HOH . I 3 HOH A 4 1004 30 HOH HOH . I 3 HOH A 5 1005 148 HOH HOH . I 3 HOH A 6 1006 5 HOH HOH . I 3 HOH A 7 1007 138 HOH HOH . I 3 HOH A 8 1008 21 HOH HOH . I 3 HOH A 9 1009 78 HOH HOH . I 3 HOH A 10 1010 142 HOH HOH . I 3 HOH A 11 1011 68 HOH HOH . I 3 HOH A 12 1012 53 HOH HOH . I 3 HOH A 13 1013 141 HOH HOH . I 3 HOH A 14 1014 14 HOH HOH . I 3 HOH A 15 1015 145 HOH HOH . I 3 HOH A 16 1016 59 HOH HOH . I 3 HOH A 17 1017 37 HOH HOH . I 3 HOH A 18 1018 58 HOH HOH . I 3 HOH A 19 1019 97 HOH HOH . I 3 HOH A 20 1020 4 HOH HOH . I 3 HOH A 21 1021 66 HOH HOH . I 3 HOH A 22 1022 72 HOH HOH . I 3 HOH A 23 1023 8 HOH HOH . I 3 HOH A 24 1024 101 HOH HOH . I 3 HOH A 25 1025 111 HOH HOH . I 3 HOH A 26 1026 126 HOH HOH . I 3 HOH A 27 1027 104 HOH HOH . I 3 HOH A 28 1028 88 HOH HOH . I 3 HOH A 29 1029 31 HOH HOH . I 3 HOH A 30 1030 28 HOH HOH . I 3 HOH A 31 1031 54 HOH HOH . I 3 HOH A 32 1032 124 HOH HOH . I 3 HOH A 33 1033 46 HOH HOH . I 3 HOH A 34 1034 56 HOH HOH . I 3 HOH A 35 1035 42 HOH HOH . I 3 HOH A 36 1036 36 HOH HOH . I 3 HOH A 37 1037 150 HOH HOH . I 3 HOH A 38 1038 16 HOH HOH . I 3 HOH A 39 1039 41 HOH HOH . I 3 HOH A 40 1040 114 HOH HOH . I 3 HOH A 41 1041 77 HOH HOH . I 3 HOH A 42 1042 57 HOH HOH . I 3 HOH A 43 1043 40 HOH HOH . I 3 HOH A 44 1044 73 HOH HOH . I 3 HOH A 45 1045 7 HOH HOH . I 3 HOH A 46 1046 19 HOH HOH . I 3 HOH A 47 1047 127 HOH HOH . I 3 HOH A 48 1048 52 HOH HOH . I 3 HOH A 49 1049 87 HOH HOH . I 3 HOH A 50 1050 43 HOH HOH . I 3 HOH A 51 1051 98 HOH HOH . I 3 HOH A 52 1052 140 HOH HOH . I 3 HOH A 53 1053 49 HOH HOH . I 3 HOH A 54 1054 75 HOH HOH . I 3 HOH A 55 1055 20 HOH HOH . I 3 HOH A 56 1056 112 HOH HOH . I 3 HOH A 57 1057 139 HOH HOH . I 3 HOH A 58 1058 91 HOH HOH . I 3 HOH A 59 1059 10 HOH HOH . I 3 HOH A 60 1060 120 HOH HOH . I 3 HOH A 61 1061 146 HOH HOH . I 3 HOH A 62 1062 128 HOH HOH . I 3 HOH A 63 1063 134 HOH HOH . I 3 HOH A 64 1064 62 HOH HOH . I 3 HOH A 65 1065 137 HOH HOH . I 3 HOH A 66 1066 108 HOH HOH . I 3 HOH A 67 1067 136 HOH HOH . I 3 HOH A 68 1068 118 HOH HOH . I 3 HOH A 69 1069 117 HOH HOH . I 3 HOH A 70 1070 81 HOH HOH . I 3 HOH A 71 1071 115 HOH HOH . I 3 HOH A 72 1072 100 HOH HOH . I 3 HOH A 73 1073 130 HOH HOH . I 3 HOH A 74 1074 103 HOH HOH . J 3 HOH B 1 1001 110 HOH HOH . J 3 HOH B 2 1002 27 HOH HOH . J 3 HOH B 3 1003 22 HOH HOH . J 3 HOH B 4 1004 55 HOH HOH . J 3 HOH B 5 1005 84 HOH HOH . J 3 HOH B 6 1006 6 HOH HOH . J 3 HOH B 7 1007 119 HOH HOH . J 3 HOH B 8 1008 76 HOH HOH . J 3 HOH B 9 1009 64 HOH HOH . J 3 HOH B 10 1010 9 HOH HOH . J 3 HOH B 11 1011 60 HOH HOH . J 3 HOH B 12 1012 39 HOH HOH . J 3 HOH B 13 1013 102 HOH HOH . J 3 HOH B 14 1014 1 HOH HOH . J 3 HOH B 15 1015 107 HOH HOH . J 3 HOH B 16 1016 80 HOH HOH . J 3 HOH B 17 1017 79 HOH HOH . J 3 HOH B 18 1018 38 HOH HOH . J 3 HOH B 19 1019 2 HOH HOH . J 3 HOH B 20 1020 94 HOH HOH . J 3 HOH B 21 1021 23 HOH HOH . J 3 HOH B 22 1022 92 HOH HOH . J 3 HOH B 23 1023 35 HOH HOH . J 3 HOH B 24 1024 151 HOH HOH . J 3 HOH B 25 1025 11 HOH HOH . J 3 HOH B 26 1026 32 HOH HOH . J 3 HOH B 27 1027 132 HOH HOH . J 3 HOH B 28 1028 96 HOH HOH . J 3 HOH B 29 1029 25 HOH HOH . J 3 HOH B 30 1030 63 HOH HOH . J 3 HOH B 31 1031 13 HOH HOH . J 3 HOH B 32 1032 65 HOH HOH . J 3 HOH B 33 1033 33 HOH HOH . J 3 HOH B 34 1034 18 HOH HOH . J 3 HOH B 35 1035 105 HOH HOH . J 3 HOH B 36 1036 149 HOH HOH . J 3 HOH B 37 1037 83 HOH HOH . J 3 HOH B 38 1038 123 HOH HOH . J 3 HOH B 39 1039 12 HOH HOH . J 3 HOH B 40 1040 34 HOH HOH . J 3 HOH B 41 1041 47 HOH HOH . J 3 HOH B 42 1042 71 HOH HOH . J 3 HOH B 43 1043 122 HOH HOH . J 3 HOH B 44 1044 45 HOH HOH . J 3 HOH B 45 1045 48 HOH HOH . J 3 HOH B 46 1046 74 HOH HOH . J 3 HOH B 47 1047 129 HOH HOH . J 3 HOH B 48 1048 90 HOH HOH . J 3 HOH B 49 1049 3 HOH HOH . J 3 HOH B 50 1050 113 HOH HOH . J 3 HOH B 51 1051 89 HOH HOH . J 3 HOH B 52 1052 82 HOH HOH . J 3 HOH B 53 1053 15 HOH HOH . J 3 HOH B 54 1054 51 HOH HOH . J 3 HOH B 55 1055 69 HOH HOH . J 3 HOH B 56 1056 70 HOH HOH . J 3 HOH B 57 1057 44 HOH HOH . J 3 HOH B 58 1058 135 HOH HOH . J 3 HOH B 59 1059 116 HOH HOH . J 3 HOH B 60 1060 109 HOH HOH . J 3 HOH B 61 1061 99 HOH HOH . J 3 HOH B 62 1062 125 HOH HOH . J 3 HOH B 63 1063 147 HOH HOH . J 3 HOH B 64 1064 85 HOH HOH . J 3 HOH B 65 1065 61 HOH HOH . J 3 HOH B 66 1066 131 HOH HOH . J 3 HOH B 67 1067 121 HOH HOH . J 3 HOH B 68 1068 24 HOH HOH . J 3 HOH B 69 1069 106 HOH HOH . J 3 HOH B 70 1070 67 HOH HOH . J 3 HOH B 71 1071 86 HOH HOH . J 3 HOH B 72 1072 93 HOH HOH . J 3 HOH B 73 1073 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.443 _atom_site.Cartn_y 41.135 _atom_site.Cartn_z 52.091 _atom_site.occupancy 0.23 _atom_site.B_iso_or_equiv 57.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 901 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 375 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #