data_5W3Q # _model_server_result.job_id 9Fpclq2Q3vY74Se-LnnPJA _model_server_result.datetime_utc '2024-11-25 10:20:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5W3Q # _exptl.entry_id 5W3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W3Q _cell.length_a 34.337 _cell.length_b 45.166 _cell.length_c 97.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 116 A ASP 116 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc2 A OXT ARG 159 A ARG 159 1_555 C CA CA . A CA 202 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc3 C CA CA . A CA 202 1_555 D O HOH . A HOH 327 3_357 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc4 C CA CA . A CA 202 1_555 D O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc5 C CA CA . A CA 202 1_555 D O HOH . A HOH 392 3_357 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc6 C CA CA . A CA 202 1_555 D O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W3Q _atom_sites.fract_transf_matrix[1][1] 0.029123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010228 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 201 1 NDP NDP . C 3 CA A 1 202 1 CA CA . D 4 HOH A 1 301 204 HOH HOH . D 4 HOH A 2 302 51 HOH HOH . D 4 HOH A 3 303 243 HOH HOH . D 4 HOH A 4 304 11 HOH HOH . D 4 HOH A 5 305 195 HOH HOH . D 4 HOH A 6 306 17 HOH HOH . D 4 HOH A 7 307 238 HOH HOH . D 4 HOH A 8 308 56 HOH HOH . D 4 HOH A 9 309 76 HOH HOH . D 4 HOH A 10 310 244 HOH HOH . D 4 HOH A 11 311 234 HOH HOH . D 4 HOH A 12 312 90 HOH HOH . D 4 HOH A 13 313 58 HOH HOH . D 4 HOH A 14 314 165 HOH HOH . D 4 HOH A 15 315 54 HOH HOH . D 4 HOH A 16 316 106 HOH HOH . D 4 HOH A 17 317 102 HOH HOH . D 4 HOH A 18 318 125 HOH HOH . D 4 HOH A 19 319 219 HOH HOH . D 4 HOH A 20 320 240 HOH HOH . D 4 HOH A 21 321 159 HOH HOH . D 4 HOH A 22 322 70 HOH HOH . D 4 HOH A 23 323 50 HOH HOH . D 4 HOH A 24 324 9 HOH HOH . D 4 HOH A 25 325 214 HOH HOH . D 4 HOH A 26 326 199 HOH HOH . D 4 HOH A 27 327 27 HOH HOH . D 4 HOH A 28 328 193 HOH HOH . D 4 HOH A 29 329 98 HOH HOH . D 4 HOH A 30 330 21 HOH HOH . D 4 HOH A 31 331 15 HOH HOH . D 4 HOH A 32 332 123 HOH HOH . D 4 HOH A 33 333 37 HOH HOH . D 4 HOH A 34 334 88 HOH HOH . D 4 HOH A 35 335 18 HOH HOH . D 4 HOH A 36 336 53 HOH HOH . D 4 HOH A 37 337 203 HOH HOH . D 4 HOH A 38 338 14 HOH HOH . D 4 HOH A 39 339 44 HOH HOH . D 4 HOH A 40 340 145 HOH HOH . D 4 HOH A 41 341 150 HOH HOH . D 4 HOH A 42 342 107 HOH HOH . D 4 HOH A 43 343 153 HOH HOH . D 4 HOH A 44 344 220 HOH HOH . D 4 HOH A 45 345 19 HOH HOH . D 4 HOH A 46 346 135 HOH HOH . D 4 HOH A 47 347 68 HOH HOH . D 4 HOH A 48 348 168 HOH HOH . D 4 HOH A 49 349 79 HOH HOH . D 4 HOH A 50 350 82 HOH HOH . D 4 HOH A 51 351 161 HOH HOH . D 4 HOH A 52 352 8 HOH HOH . D 4 HOH A 53 353 127 HOH HOH . D 4 HOH A 54 354 175 HOH HOH . D 4 HOH A 55 355 121 HOH HOH . D 4 HOH A 56 356 2 HOH HOH . D 4 HOH A 57 357 4 HOH HOH . D 4 HOH A 58 358 122 HOH HOH . D 4 HOH A 59 359 41 HOH HOH . D 4 HOH A 60 360 69 HOH HOH . D 4 HOH A 61 361 96 HOH HOH . D 4 HOH A 62 362 131 HOH HOH . D 4 HOH A 63 363 26 HOH HOH . D 4 HOH A 64 364 55 HOH HOH . D 4 HOH A 65 365 223 HOH HOH . D 4 HOH A 66 366 140 HOH HOH . D 4 HOH A 67 367 143 HOH HOH . D 4 HOH A 68 368 12 HOH HOH . D 4 HOH A 69 369 7 HOH HOH . D 4 HOH A 70 370 45 HOH HOH . D 4 HOH A 71 371 112 HOH HOH . D 4 HOH A 72 372 78 HOH HOH . D 4 HOH A 73 373 136 HOH HOH . D 4 HOH A 74 374 200 HOH HOH . D 4 HOH A 75 375 24 HOH HOH . D 4 HOH A 76 376 116 HOH HOH . D 4 HOH A 77 377 36 HOH HOH . D 4 HOH A 78 378 52 HOH HOH . D 4 HOH A 79 379 246 HOH HOH . D 4 HOH A 80 380 205 HOH HOH . D 4 HOH A 81 381 72 HOH HOH . D 4 HOH A 82 382 63 HOH HOH . D 4 HOH A 83 383 67 HOH HOH . D 4 HOH A 84 384 49 HOH HOH . D 4 HOH A 85 385 120 HOH HOH . D 4 HOH A 86 386 237 HOH HOH . D 4 HOH A 87 387 86 HOH HOH . D 4 HOH A 88 388 59 HOH HOH . D 4 HOH A 89 389 81 HOH HOH . D 4 HOH A 90 390 164 HOH HOH . D 4 HOH A 91 391 73 HOH HOH . D 4 HOH A 92 392 180 HOH HOH . D 4 HOH A 93 393 111 HOH HOH . D 4 HOH A 94 394 16 HOH HOH . D 4 HOH A 95 395 43 HOH HOH . D 4 HOH A 96 396 31 HOH HOH . D 4 HOH A 97 397 13 HOH HOH . D 4 HOH A 98 398 189 HOH HOH . D 4 HOH A 99 399 178 HOH HOH . D 4 HOH A 100 400 129 HOH HOH . D 4 HOH A 101 401 60 HOH HOH . D 4 HOH A 102 402 257 HOH HOH . D 4 HOH A 103 403 80 HOH HOH . D 4 HOH A 104 404 192 HOH HOH . D 4 HOH A 105 405 33 HOH HOH . D 4 HOH A 106 406 147 HOH HOH . D 4 HOH A 107 407 174 HOH HOH . D 4 HOH A 108 408 119 HOH HOH . D 4 HOH A 109 409 40 HOH HOH . D 4 HOH A 110 410 209 HOH HOH . D 4 HOH A 111 411 100 HOH HOH . D 4 HOH A 112 412 71 HOH HOH . D 4 HOH A 113 413 249 HOH HOH . D 4 HOH A 114 414 25 HOH HOH . D 4 HOH A 115 415 113 HOH HOH . D 4 HOH A 116 416 224 HOH HOH . D 4 HOH A 117 417 34 HOH HOH . D 4 HOH A 118 418 241 HOH HOH . D 4 HOH A 119 419 228 HOH HOH . D 4 HOH A 120 420 42 HOH HOH . D 4 HOH A 121 421 57 HOH HOH . D 4 HOH A 122 422 115 HOH HOH . D 4 HOH A 123 423 32 HOH HOH . D 4 HOH A 124 424 206 HOH HOH . D 4 HOH A 125 425 65 HOH HOH . D 4 HOH A 126 426 75 HOH HOH . D 4 HOH A 127 427 163 HOH HOH . D 4 HOH A 128 428 109 HOH HOH . D 4 HOH A 129 429 103 HOH HOH . D 4 HOH A 130 430 97 HOH HOH . D 4 HOH A 131 431 83 HOH HOH . D 4 HOH A 132 432 146 HOH HOH . D 4 HOH A 133 433 28 HOH HOH . D 4 HOH A 134 434 156 HOH HOH . D 4 HOH A 135 435 84 HOH HOH . D 4 HOH A 136 436 154 HOH HOH . D 4 HOH A 137 437 172 HOH HOH . D 4 HOH A 138 438 194 HOH HOH . D 4 HOH A 139 439 61 HOH HOH . D 4 HOH A 140 440 255 HOH HOH . D 4 HOH A 141 441 166 HOH HOH . D 4 HOH A 142 442 253 HOH HOH . D 4 HOH A 143 443 233 HOH HOH . D 4 HOH A 144 444 95 HOH HOH . D 4 HOH A 145 445 74 HOH HOH . D 4 HOH A 146 446 182 HOH HOH . D 4 HOH A 147 447 47 HOH HOH . D 4 HOH A 148 448 35 HOH HOH . D 4 HOH A 149 449 231 HOH HOH . D 4 HOH A 150 450 197 HOH HOH . D 4 HOH A 151 451 232 HOH HOH . D 4 HOH A 152 452 157 HOH HOH . D 4 HOH A 153 453 167 HOH HOH . D 4 HOH A 154 454 89 HOH HOH . D 4 HOH A 155 455 87 HOH HOH . D 4 HOH A 156 456 179 HOH HOH . D 4 HOH A 157 457 85 HOH HOH . D 4 HOH A 158 458 108 HOH HOH . D 4 HOH A 159 459 245 HOH HOH . D 4 HOH A 160 460 137 HOH HOH . D 4 HOH A 161 461 23 HOH HOH . D 4 HOH A 162 462 254 HOH HOH . D 4 HOH A 163 463 155 HOH HOH . D 4 HOH A 164 464 46 HOH HOH . D 4 HOH A 165 465 242 HOH HOH . D 4 HOH A 166 466 5 HOH HOH . D 4 HOH A 167 467 66 HOH HOH . D 4 HOH A 168 468 133 HOH HOH . D 4 HOH A 169 469 92 HOH HOH . D 4 HOH A 170 470 77 HOH HOH . D 4 HOH A 171 471 171 HOH HOH . D 4 HOH A 172 472 20 HOH HOH . D 4 HOH A 173 473 1 HOH HOH . D 4 HOH A 174 474 169 HOH HOH . D 4 HOH A 175 475 105 HOH HOH . D 4 HOH A 176 476 38 HOH HOH . D 4 HOH A 177 477 151 HOH HOH . D 4 HOH A 178 478 217 HOH HOH . D 4 HOH A 179 479 64 HOH HOH . D 4 HOH A 180 480 6 HOH HOH . D 4 HOH A 181 481 22 HOH HOH . D 4 HOH A 182 482 215 HOH HOH . D 4 HOH A 183 483 117 HOH HOH . D 4 HOH A 184 484 190 HOH HOH . D 4 HOH A 185 485 148 HOH HOH . D 4 HOH A 186 486 210 HOH HOH . D 4 HOH A 187 487 10 HOH HOH . D 4 HOH A 188 488 132 HOH HOH . D 4 HOH A 189 489 221 HOH HOH . D 4 HOH A 190 490 183 HOH HOH . D 4 HOH A 191 491 248 HOH HOH . D 4 HOH A 192 492 225 HOH HOH . D 4 HOH A 193 493 207 HOH HOH . D 4 HOH A 194 494 139 HOH HOH . D 4 HOH A 195 495 124 HOH HOH . D 4 HOH A 196 496 216 HOH HOH . D 4 HOH A 197 497 247 HOH HOH . D 4 HOH A 198 498 212 HOH HOH . D 4 HOH A 199 499 149 HOH HOH . D 4 HOH A 200 500 152 HOH HOH . D 4 HOH A 201 501 29 HOH HOH . D 4 HOH A 202 502 104 HOH HOH . D 4 HOH A 203 503 196 HOH HOH . D 4 HOH A 204 504 229 HOH HOH . D 4 HOH A 205 505 187 HOH HOH . D 4 HOH A 206 506 236 HOH HOH . D 4 HOH A 207 507 101 HOH HOH . D 4 HOH A 208 508 158 HOH HOH . D 4 HOH A 209 509 118 HOH HOH . D 4 HOH A 210 510 239 HOH HOH . D 4 HOH A 211 511 208 HOH HOH . D 4 HOH A 212 512 201 HOH HOH . D 4 HOH A 213 513 39 HOH HOH . D 4 HOH A 214 514 177 HOH HOH . D 4 HOH A 215 515 211 HOH HOH . D 4 HOH A 216 516 218 HOH HOH . D 4 HOH A 217 517 235 HOH HOH . D 4 HOH A 218 518 48 HOH HOH . D 4 HOH A 219 519 62 HOH HOH . D 4 HOH A 220 520 181 HOH HOH . D 4 HOH A 221 521 91 HOH HOH . D 4 HOH A 222 522 114 HOH HOH . D 4 HOH A 223 523 184 HOH HOH . D 4 HOH A 224 524 162 HOH HOH . D 4 HOH A 225 525 160 HOH HOH . D 4 HOH A 226 526 94 HOH HOH . D 4 HOH A 227 527 128 HOH HOH . D 4 HOH A 228 528 30 HOH HOH . D 4 HOH A 229 529 173 HOH HOH . D 4 HOH A 230 530 202 HOH HOH . D 4 HOH A 231 531 99 HOH HOH . D 4 HOH A 232 532 144 HOH HOH . D 4 HOH A 233 533 141 HOH HOH . D 4 HOH A 234 534 185 HOH HOH . D 4 HOH A 235 535 250 HOH HOH . D 4 HOH A 236 536 3 HOH HOH . D 4 HOH A 237 537 142 HOH HOH . D 4 HOH A 238 538 188 HOH HOH . D 4 HOH A 239 539 198 HOH HOH . D 4 HOH A 240 540 126 HOH HOH . D 4 HOH A 241 541 170 HOH HOH . D 4 HOH A 242 542 222 HOH HOH . D 4 HOH A 243 543 134 HOH HOH . D 4 HOH A 244 544 226 HOH HOH . D 4 HOH A 245 545 227 HOH HOH . D 4 HOH A 246 546 138 HOH HOH . D 4 HOH A 247 547 252 HOH HOH . D 4 HOH A 248 548 251 HOH HOH . D 4 HOH A 249 549 186 HOH HOH . D 4 HOH A 250 550 191 HOH HOH . D 4 HOH A 251 551 176 HOH HOH . D 4 HOH A 252 552 230 HOH HOH . D 4 HOH A 253 553 110 HOH HOH . D 4 HOH A 254 554 256 HOH HOH . D 4 HOH A 255 555 130 HOH HOH . D 4 HOH A 256 556 213 HOH HOH . D 4 HOH A 257 557 93 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -43.414 _atom_site.Cartn_y -32.617 _atom_site.Cartn_z 119.078 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #