data_5W44 # _model_server_result.job_id 8WIM8EsnJrJ52TJUB8xRFg _model_server_result.datetime_utc '2024-11-29 12:10:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5W44 # _exptl.entry_id 5W44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5W44 _cell.length_a 74.111 _cell.length_b 74.111 _cell.length_c 127.845 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 41 A HIS 41 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc2 A OE1 GLU 61 A GLU 61 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc3 A OD2 ASP 89 A ASP 89 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc4 A OD1 ASP 89 A ASP 89 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc5 A OE1 GLU 100 A GLU 100 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc6 A O ILE 101 A ILE 101 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc7 B MN MN . A MN 301 1_555 C O08 GY6 . A GY6 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc8 B MN MN . A MN 301 1_555 C O05 GY6 . A GY6 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc9 C O05 GY6 . A GY6 302 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc10 C O12 GY6 . A GY6 302 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc11 D MG MG . A MG 303 1_555 F O HOH . A HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc12 D MG MG . A MG 303 1_555 F O HOH . A HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W44 _atom_sites.fract_transf_matrix[1][1] 0.013493 _atom_sites.fract_transf_matrix[1][2] 0.00779 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 301 MN MN . C 3 GY6 A 1 302 1 GY6 GY6 . D 4 MG A 1 303 1 MG MG . E 5 NA A 1 304 1 NA NA . F 6 HOH A 1 401 69 HOH HOH . F 6 HOH A 2 402 29 HOH HOH . F 6 HOH A 3 403 63 HOH HOH . F 6 HOH A 4 404 32 HOH HOH . F 6 HOH A 5 405 36 HOH HOH . F 6 HOH A 6 406 68 HOH HOH . F 6 HOH A 7 407 56 HOH HOH . F 6 HOH A 8 408 43 HOH HOH . F 6 HOH A 9 409 5 HOH HOH . F 6 HOH A 10 410 13 HOH HOH . F 6 HOH A 11 411 15 HOH HOH . F 6 HOH A 12 412 28 HOH HOH . F 6 HOH A 13 413 55 HOH HOH . F 6 HOH A 14 414 10 HOH HOH . F 6 HOH A 15 415 20 HOH HOH . F 6 HOH A 16 416 17 HOH HOH . F 6 HOH A 17 417 34 HOH HOH . F 6 HOH A 18 418 46 HOH HOH . F 6 HOH A 19 419 39 HOH HOH . F 6 HOH A 20 420 49 HOH HOH . F 6 HOH A 21 421 12 HOH HOH . F 6 HOH A 22 422 11 HOH HOH . F 6 HOH A 23 423 7 HOH HOH . F 6 HOH A 24 424 23 HOH HOH . F 6 HOH A 25 425 25 HOH HOH . F 6 HOH A 26 426 27 HOH HOH . F 6 HOH A 27 427 35 HOH HOH . F 6 HOH A 28 428 33 HOH HOH . F 6 HOH A 29 429 30 HOH HOH . F 6 HOH A 30 430 31 HOH HOH . F 6 HOH A 31 431 18 HOH HOH . F 6 HOH A 32 432 60 HOH HOH . F 6 HOH A 33 433 16 HOH HOH . F 6 HOH A 34 434 50 HOH HOH . F 6 HOH A 35 435 22 HOH HOH . F 6 HOH A 36 436 72 HOH HOH . F 6 HOH A 37 437 14 HOH HOH . F 6 HOH A 38 438 41 HOH HOH . F 6 HOH A 39 439 24 HOH HOH . F 6 HOH A 40 440 51 HOH HOH . F 6 HOH A 41 441 57 HOH HOH . F 6 HOH A 42 442 59 HOH HOH . F 6 HOH A 43 443 58 HOH HOH . F 6 HOH A 44 444 48 HOH HOH . F 6 HOH A 45 445 53 HOH HOH . F 6 HOH A 46 446 42 HOH HOH . F 6 HOH A 47 447 70 HOH HOH . F 6 HOH A 48 448 21 HOH HOH . F 6 HOH A 49 449 71 HOH HOH . F 6 HOH A 50 450 38 HOH HOH . F 6 HOH A 51 451 45 HOH HOH . F 6 HOH A 52 452 62 HOH HOH . F 6 HOH A 53 453 40 HOH HOH . F 6 HOH A 54 454 54 HOH HOH . F 6 HOH A 55 455 52 HOH HOH . F 6 HOH A 56 456 19 HOH HOH . F 6 HOH A 57 457 44 HOH HOH . F 6 HOH A 58 458 26 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -7.42 _atom_site.Cartn_y 78.606 _atom_site.Cartn_z 19.466 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 304 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #