data_5W55 # _model_server_result.job_id zQfvopNcVy8NZj0Ol4lAAw _model_server_result.datetime_utc '2024-10-19 05:26:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5W55 # _exptl.entry_id 5W55 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W55 _cell.length_a 43.411 _cell.length_b 51.351 _cell.length_c 56.755 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W55 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5W55 _atom_sites.fract_transf_matrix[1][1] 0.023036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X30 A 1 201 201 X30 X30 . C 3 EDO A 1 202 202 EDO EDO . D 4 HOH A 1 301 1 HOH HOH . D 4 HOH A 2 302 43 HOH HOH . D 4 HOH A 3 303 108 HOH HOH . D 4 HOH A 4 304 124 HOH HOH . D 4 HOH A 5 305 50 HOH HOH . D 4 HOH A 6 306 48 HOH HOH . D 4 HOH A 7 307 60 HOH HOH . D 4 HOH A 8 308 33 HOH HOH . D 4 HOH A 9 309 49 HOH HOH . D 4 HOH A 10 310 145 HOH HOH . D 4 HOH A 11 311 96 HOH HOH . D 4 HOH A 12 312 83 HOH HOH . D 4 HOH A 13 313 95 HOH HOH . D 4 HOH A 14 314 56 HOH HOH . D 4 HOH A 15 315 105 HOH HOH . D 4 HOH A 16 316 2 HOH HOH . D 4 HOH A 17 317 10 HOH HOH . D 4 HOH A 18 318 126 HOH HOH . D 4 HOH A 19 319 74 HOH HOH . D 4 HOH A 20 320 40 HOH HOH . D 4 HOH A 21 321 111 HOH HOH . D 4 HOH A 22 322 88 HOH HOH . D 4 HOH A 23 323 73 HOH HOH . D 4 HOH A 24 324 7 HOH HOH . D 4 HOH A 25 325 110 HOH HOH . D 4 HOH A 26 326 19 HOH HOH . D 4 HOH A 27 327 107 HOH HOH . D 4 HOH A 28 328 67 HOH HOH . D 4 HOH A 29 329 5 HOH HOH . D 4 HOH A 30 330 102 HOH HOH . D 4 HOH A 31 331 17 HOH HOH . D 4 HOH A 32 332 14 HOH HOH . D 4 HOH A 33 333 27 HOH HOH . D 4 HOH A 34 334 63 HOH HOH . D 4 HOH A 35 335 52 HOH HOH . D 4 HOH A 36 336 66 HOH HOH . D 4 HOH A 37 337 39 HOH HOH . D 4 HOH A 38 338 85 HOH HOH . D 4 HOH A 39 339 115 HOH HOH . D 4 HOH A 40 340 101 HOH HOH . D 4 HOH A 41 341 37 HOH HOH . D 4 HOH A 42 342 75 HOH HOH . D 4 HOH A 43 343 24 HOH HOH . D 4 HOH A 44 344 45 HOH HOH . D 4 HOH A 45 345 109 HOH HOH . D 4 HOH A 46 346 8 HOH HOH . D 4 HOH A 47 347 68 HOH HOH . D 4 HOH A 48 348 82 HOH HOH . D 4 HOH A 49 349 6 HOH HOH . D 4 HOH A 50 350 3 HOH HOH . D 4 HOH A 51 351 118 HOH HOH . D 4 HOH A 52 352 30 HOH HOH . D 4 HOH A 53 353 141 HOH HOH . D 4 HOH A 54 354 78 HOH HOH . D 4 HOH A 55 355 18 HOH HOH . D 4 HOH A 56 356 72 HOH HOH . D 4 HOH A 57 357 100 HOH HOH . D 4 HOH A 58 358 12 HOH HOH . D 4 HOH A 59 359 76 HOH HOH . D 4 HOH A 60 360 9 HOH HOH . D 4 HOH A 61 361 53 HOH HOH . D 4 HOH A 62 362 84 HOH HOH . D 4 HOH A 63 363 64 HOH HOH . D 4 HOH A 64 364 23 HOH HOH . D 4 HOH A 65 365 130 HOH HOH . D 4 HOH A 66 366 25 HOH HOH . D 4 HOH A 67 367 28 HOH HOH . D 4 HOH A 68 368 90 HOH HOH . D 4 HOH A 69 369 21 HOH HOH . D 4 HOH A 70 370 80 HOH HOH . D 4 HOH A 71 371 44 HOH HOH . D 4 HOH A 72 372 54 HOH HOH . D 4 HOH A 73 373 120 HOH HOH . D 4 HOH A 74 374 46 HOH HOH . D 4 HOH A 75 375 31 HOH HOH . D 4 HOH A 76 376 51 HOH HOH . D 4 HOH A 77 377 131 HOH HOH . D 4 HOH A 78 378 38 HOH HOH . D 4 HOH A 79 379 34 HOH HOH . D 4 HOH A 80 380 20 HOH HOH . D 4 HOH A 81 381 70 HOH HOH . D 4 HOH A 82 382 89 HOH HOH . D 4 HOH A 83 383 16 HOH HOH . D 4 HOH A 84 384 26 HOH HOH . D 4 HOH A 85 385 42 HOH HOH . D 4 HOH A 86 386 114 HOH HOH . D 4 HOH A 87 387 47 HOH HOH . D 4 HOH A 88 388 32 HOH HOH . D 4 HOH A 89 389 4 HOH HOH . D 4 HOH A 90 390 13 HOH HOH . D 4 HOH A 91 391 35 HOH HOH . D 4 HOH A 92 392 11 HOH HOH . D 4 HOH A 93 393 61 HOH HOH . D 4 HOH A 94 394 129 HOH HOH . D 4 HOH A 95 395 58 HOH HOH . D 4 HOH A 96 396 123 HOH HOH . D 4 HOH A 97 397 29 HOH HOH . D 4 HOH A 98 398 81 HOH HOH . D 4 HOH A 99 399 55 HOH HOH . D 4 HOH A 100 400 22 HOH HOH . D 4 HOH A 101 401 128 HOH HOH . D 4 HOH A 102 402 15 HOH HOH . D 4 HOH A 103 403 59 HOH HOH . D 4 HOH A 104 404 143 HOH HOH . D 4 HOH A 105 405 36 HOH HOH . D 4 HOH A 106 406 79 HOH HOH . D 4 HOH A 107 407 117 HOH HOH . D 4 HOH A 108 408 144 HOH HOH . D 4 HOH A 109 409 119 HOH HOH . D 4 HOH A 110 410 91 HOH HOH . D 4 HOH A 111 411 97 HOH HOH . D 4 HOH A 112 412 138 HOH HOH . D 4 HOH A 113 413 103 HOH HOH . D 4 HOH A 114 414 146 HOH HOH . D 4 HOH A 115 415 112 HOH HOH . D 4 HOH A 116 416 86 HOH HOH . D 4 HOH A 117 417 92 HOH HOH . D 4 HOH A 118 418 93 HOH HOH . D 4 HOH A 119 419 104 HOH HOH . D 4 HOH A 120 420 121 HOH HOH . D 4 HOH A 121 421 136 HOH HOH . D 4 HOH A 122 422 116 HOH HOH . D 4 HOH A 123 423 132 HOH HOH . D 4 HOH A 124 424 148 HOH HOH . D 4 HOH A 125 425 113 HOH HOH . D 4 HOH A 126 426 147 HOH HOH . D 4 HOH A 127 427 62 HOH HOH . D 4 HOH A 128 428 139 HOH HOH . D 4 HOH A 129 429 125 HOH HOH . D 4 HOH A 130 430 122 HOH HOH . D 4 HOH A 131 431 98 HOH HOH . D 4 HOH A 132 432 69 HOH HOH . D 4 HOH A 133 433 41 HOH HOH . D 4 HOH A 134 434 134 HOH HOH . D 4 HOH A 135 435 142 HOH HOH . D 4 HOH A 136 436 127 HOH HOH . D 4 HOH A 137 437 99 HOH HOH . D 4 HOH A 138 438 137 HOH HOH . D 4 HOH A 139 439 94 HOH HOH . D 4 HOH A 140 440 135 HOH HOH . D 4 HOH A 141 441 57 HOH HOH . D 4 HOH A 142 442 140 HOH HOH . D 4 HOH A 143 443 71 HOH HOH . D 4 HOH A 144 444 87 HOH HOH . D 4 HOH A 145 445 65 HOH HOH . D 4 HOH A 146 446 106 HOH HOH . D 4 HOH A 147 447 133 HOH HOH . D 4 HOH A 148 448 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 11.972 -22.924 -17.339 1 25.2 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 3 13.006 -22.989 -18.325 1 25.72 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 3 11.062 -21.744 -17.637 1 24.07 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 3 11.77 -20.503 -17.534 1 22.86 ? O2 EDO 202 A 1 HETATM 5 H H11 EDO . . . C 3 12.414 -22.809 -16.347 1 30.33 ? H11 EDO 202 A 1 HETATM 6 H H12 EDO . . . C 3 11.393 -23.849 -17.349 1 30.33 ? H12 EDO 202 A 1 HETATM 7 H HO1 EDO . . . C 3 13.585 -23.74 -18.135 1 30.96 ? HO1 EDO 202 A 1 HETATM 8 H H21 EDO . . . C 3 10.226 -21.744 -16.934 1 28.98 ? H21 EDO 202 A 1 HETATM 9 H H22 EDO . . . C 3 10.653 -21.845 -18.644 1 28.98 ? H22 EDO 202 A 1 HETATM 10 H HO2 EDO . . . C 3 11.168 -19.771 -17.727 1 27.53 ? HO2 EDO 202 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #