data_5W74 # _model_server_result.job_id N5ymGnEZJxQCLz29iXEqMw _model_server_result.datetime_utc '2024-10-18 20:20:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":601}' # _entry.id 5W74 # _exptl.entry_id 5W74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W74 _cell.length_a 152.72 _cell.length_b 221.93 _cell.length_c 262.15 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 152.72 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 I O1B ADP . A ADP 600 1_555 J MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc2 I O2B ADP . A ADP 600 1_555 J MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc3 I O2A ADP . A ADP 600 1_555 J MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc4 I O3A ADP . A ADP 600 1_555 J MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc5 B OD1 ASP 91 B ASP 91 1_555 L MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc6 K O1B ADP . B ADP 600 1_555 L MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? metalc ? metalc7 K O3A ADP . B ADP 600 1_555 L MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc8 C OD1 ASP 91 C ASP 91 1_555 N MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc9 M O3A ADP . C ADP 600 1_555 N MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc10 D OD1 ASP 91 D ASP 91 1_555 P MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc11 D OD2 ASP 91 D ASP 91 1_555 P MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc12 O O3A ADP . D ADP 600 1_555 P MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc13 E OD1 ASP 91 E ASP 91 1_555 R MG MG . E MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc14 Q O1B ADP . E ADP 600 1_555 R MG MG . E MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc15 Q O3A ADP . E ADP 600 1_555 R MG MG . E MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc16 F OD1 ASP 91 F ASP 91 1_555 T MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc17 S O3A ADP . F ADP 600 1_555 T MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc18 G OD1 ASP 91 G ASP 91 1_555 V MG MG . G MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc19 U O1B ADP . G ADP 600 1_555 V MG MG . G MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc20 U O3A ADP . G ADP 600 1_555 V MG MG . G MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc21 H OD1 ASP 91 H ASP 91 1_555 X MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc22 H OD2 ASP 91 H ASP 91 1_555 X MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? metalc ? metalc23 W O3A ADP . H ADP 600 1_555 X MG MG . H MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W74 _atom_sites.fract_transf_matrix[1][1] 0.006548 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003815 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ADP A 1 600 600 ADP ADP . J 3 MG A 1 601 601 MG MG . K 2 ADP B 1 600 600 ADP ADP . L 3 MG B 1 601 601 MG MG . M 2 ADP C 1 600 600 ADP ADP . N 3 MG C 1 601 601 MG MG . O 2 ADP D 1 600 600 ADP ADP . P 3 MG D 1 601 601 MG MG . Q 2 ADP E 1 600 600 ADP ADP . R 3 MG E 1 601 601 MG MG . S 2 ADP F 1 600 600 ADP ADP . T 3 MG F 1 601 601 MG MG . U 2 ADP G 1 600 600 ADP ADP . V 3 MG G 1 601 601 MG MG . W 2 ADP H 1 600 600 ADP ADP . X 3 MG H 1 601 601 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 24.646 _atom_site.Cartn_y -85.584 _atom_site.Cartn_z -24.819 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 87.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 228 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #