data_5W85 # _model_server_result.job_id m5nMOY7EYOTNSyQclpM0Iw _model_server_result.datetime_utc '2024-10-19 15:32:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4000}' # _entry.id 5W85 # _exptl.entry_id 5W85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.526 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(1,3-benzothiazol-6-yl)amino]-4-{[(2S)-1-hydroxy-3-phenylpropan-2-yl]amino}-N-methylpyridine-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5W85 _cell.length_a 88.44 _cell.length_b 125.56 _cell.length_c 141.33 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TPO 187 A TPO 342 1_555 A N VAL 188 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MET 189 A MET 344 1_555 A N TPO 190 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C TPO 190 A TPO 345 1_555 A N SEP 191 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C SEP 191 A SEP 346 1_555 A N ARG 192 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale5 B C GLN 186 B GLN 341 1_555 B N TPO 187 B TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale6 B C TPO 187 B TPO 342 1_555 B N VAL 188 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale7 B C MET 189 B MET 344 1_555 B N TPO 190 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale8 B C TPO 190 B TPO 345 1_555 B N SEP 191 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 B C SEP 191 B SEP 346 1_555 B N ARG 192 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C23 H23 N5 O2 S' _chem_comp.formula_weight 433.526 _chem_comp.id 9YS _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(1,3-benzothiazol-6-yl)amino]-4-{[(2S)-1-hydroxy-3-phenylpropan-2-yl]amino}-N-methylpyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5W85 _atom_sites.fract_transf_matrix[1][1] 0.011307 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007964 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 9YS A 1 4000 4000 9YS LG1 . D 2 9YS B 1 4000 4000 9YS LG1 . E 3 HOH A 1 4101 103 HOH HOH . E 3 HOH A 2 4102 2 HOH HOH . E 3 HOH A 3 4103 5 HOH HOH . E 3 HOH A 4 4104 66 HOH HOH . E 3 HOH A 5 4105 62 HOH HOH . E 3 HOH A 6 4106 54 HOH HOH . E 3 HOH A 7 4107 65 HOH HOH . E 3 HOH A 8 4108 1 HOH HOH . E 3 HOH A 9 4109 16 HOH HOH . E 3 HOH A 10 4110 29 HOH HOH . E 3 HOH A 11 4111 56 HOH HOH . E 3 HOH A 12 4112 23 HOH HOH . E 3 HOH A 13 4113 32 HOH HOH . E 3 HOH A 14 4114 57 HOH HOH . E 3 HOH A 15 4115 93 HOH HOH . E 3 HOH A 16 4116 15 HOH HOH . E 3 HOH A 17 4117 104 HOH HOH . E 3 HOH A 18 4118 49 HOH HOH . E 3 HOH A 19 4119 61 HOH HOH . E 3 HOH A 20 4120 64 HOH HOH . E 3 HOH A 21 4121 21 HOH HOH . E 3 HOH A 22 4122 26 HOH HOH . E 3 HOH A 23 4123 33 HOH HOH . E 3 HOH A 24 4124 28 HOH HOH . E 3 HOH A 25 4125 98 HOH HOH . E 3 HOH A 26 4126 10 HOH HOH . E 3 HOH A 27 4127 42 HOH HOH . E 3 HOH A 28 4128 96 HOH HOH . E 3 HOH A 29 4129 14 HOH HOH . E 3 HOH A 30 4130 51 HOH HOH . E 3 HOH A 31 4131 87 HOH HOH . E 3 HOH A 32 4132 27 HOH HOH . E 3 HOH A 33 4133 35 HOH HOH . E 3 HOH A 34 4134 25 HOH HOH . E 3 HOH A 35 4135 31 HOH HOH . E 3 HOH A 36 4136 44 HOH HOH . E 3 HOH A 37 4137 3 HOH HOH . E 3 HOH A 38 4138 9 HOH HOH . E 3 HOH A 39 4139 59 HOH HOH . E 3 HOH A 40 4140 89 HOH HOH . E 3 HOH A 41 4141 95 HOH HOH . E 3 HOH A 42 4142 8 HOH HOH . E 3 HOH A 43 4143 13 HOH HOH . E 3 HOH A 44 4144 102 HOH HOH . E 3 HOH A 45 4145 19 HOH HOH . E 3 HOH A 46 4146 40 HOH HOH . E 3 HOH A 47 4147 91 HOH HOH . E 3 HOH A 48 4148 58 HOH HOH . E 3 HOH A 49 4149 22 HOH HOH . E 3 HOH A 50 4150 63 HOH HOH . E 3 HOH A 51 4151 80 HOH HOH . E 3 HOH A 52 4152 81 HOH HOH . E 3 HOH A 53 4153 55 HOH HOH . E 3 HOH A 54 4154 71 HOH HOH . E 3 HOH A 55 4155 70 HOH HOH . E 3 HOH A 56 4156 94 HOH HOH . E 3 HOH A 57 4157 69 HOH HOH . E 3 HOH A 58 4158 77 HOH HOH . E 3 HOH A 59 4159 86 HOH HOH . F 3 HOH B 1 4101 106 HOH HOH . F 3 HOH B 2 4102 11 HOH HOH . F 3 HOH B 3 4103 7 HOH HOH . F 3 HOH B 4 4104 24 HOH HOH . F 3 HOH B 5 4105 76 HOH HOH . F 3 HOH B 6 4106 83 HOH HOH . F 3 HOH B 7 4107 88 HOH HOH . F 3 HOH B 8 4108 50 HOH HOH . F 3 HOH B 9 4109 34 HOH HOH . F 3 HOH B 10 4110 17 HOH HOH . F 3 HOH B 11 4111 107 HOH HOH . F 3 HOH B 12 4112 53 HOH HOH . F 3 HOH B 13 4113 12 HOH HOH . F 3 HOH B 14 4114 46 HOH HOH . F 3 HOH B 15 4115 43 HOH HOH . F 3 HOH B 16 4116 39 HOH HOH . F 3 HOH B 17 4117 60 HOH HOH . F 3 HOH B 18 4118 75 HOH HOH . F 3 HOH B 19 4119 99 HOH HOH . F 3 HOH B 20 4120 18 HOH HOH . F 3 HOH B 21 4121 4 HOH HOH . F 3 HOH B 22 4122 101 HOH HOH . F 3 HOH B 23 4123 52 HOH HOH . F 3 HOH B 24 4124 30 HOH HOH . F 3 HOH B 25 4125 41 HOH HOH . F 3 HOH B 26 4126 20 HOH HOH . F 3 HOH B 27 4127 38 HOH HOH . F 3 HOH B 28 4128 79 HOH HOH . F 3 HOH B 29 4129 36 HOH HOH . F 3 HOH B 30 4130 100 HOH HOH . F 3 HOH B 31 4131 72 HOH HOH . F 3 HOH B 32 4132 85 HOH HOH . F 3 HOH B 33 4133 97 HOH HOH . F 3 HOH B 34 4134 37 HOH HOH . F 3 HOH B 35 4135 6 HOH HOH . F 3 HOH B 36 4136 48 HOH HOH . F 3 HOH B 37 4137 73 HOH HOH . F 3 HOH B 38 4138 74 HOH HOH . F 3 HOH B 39 4139 84 HOH HOH . F 3 HOH B 40 4140 47 HOH HOH . F 3 HOH B 41 4141 82 HOH HOH . F 3 HOH B 42 4142 92 HOH HOH . F 3 HOH B 43 4143 45 HOH HOH . F 3 HOH B 44 4144 105 HOH HOH . F 3 HOH B 45 4145 68 HOH HOH . F 3 HOH B 46 4146 67 HOH HOH . F 3 HOH B 47 4147 78 HOH HOH . F 3 HOH B 48 4148 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 9YS . . . D 2 -22.431 20.284 10.733 1 63.12 ? C13 9YS 4000 B 1 HETATM 2 C C18 9YS . . . D 2 -22.348 17.692 13.369 1 68.88 ? C18 9YS 4000 B 1 HETATM 3 C C17 9YS . . . D 2 -23.026 18.397 12.379 1 67.17 ? C17 9YS 4000 B 1 HETATM 4 C C15 9YS . . . D 2 -21.614 21.086 11.734 1 63.63 ? C15 9YS 4000 B 1 HETATM 5 C C19 9YS . . . D 2 -22.987 17.327 14.546 1 68.63 ? C19 9YS 4000 B 1 HETATM 6 C C20 9YS . . . D 2 -24.313 17.664 14.75 1 68.88 ? C20 9YS 4000 B 1 HETATM 7 C C21 9YS . . . D 2 -24.998 18.365 13.773 1 69.66 ? C21 9YS 4000 B 1 HETATM 8 C C22 9YS . . . D 2 -24.359 18.728 12.596 1 67.98 ? C22 9YS 4000 B 1 HETATM 9 C C23 9YS . . . D 2 -27.023 19.694 8.024 1 54.31 ? C23 9YS 4000 B 1 HETATM 10 C C24 9YS . . . D 2 -26.833 18.877 9.139 1 57.07 ? C24 9YS 4000 B 1 HETATM 11 C C12 9YS . . . D 2 -18.556 21.166 5.604 1 59.21 ? C12 9YS 4000 B 1 HETATM 12 C C27 9YS . . . D 2 -29.107 20.515 8.95 1 57.58 ? C27 9YS 4000 B 1 HETATM 13 C C1 9YS . . . D 2 -21.957 20.236 6.99 1 59.06 ? C1 9YS 4000 B 1 HETATM 14 C C2 9YS . . . D 2 -22.726 20.009 5.847 1 57.9 ? C2 9YS 4000 B 1 HETATM 15 N N3 9YS . . . D 2 -24.056 19.835 5.849 1 56.82 ? N3 9YS 4000 B 1 HETATM 16 C C4 9YS . . . D 2 -24.691 19.886 7.027 1 56.93 ? C4 9YS 4000 B 1 HETATM 17 C C5 9YS . . . D 2 -24.024 20.107 8.236 1 57.45 ? C5 9YS 4000 B 1 HETATM 18 C C6 9YS . . . D 2 -22.639 20.288 8.224 1 58.69 ? C6 9YS 4000 B 1 HETATM 19 N N7 9YS . . . D 2 -21.924 20.515 9.386 1 60.52 ? N7 9YS 4000 B 1 HETATM 20 N N8 9YS . . . D 2 -26.069 19.704 6.982 1 55.11 ? N8 9YS 4000 B 1 HETATM 21 C C9 9YS . . . D 2 -20.468 20.423 6.92 1 59.9 ? C9 9YS 4000 B 1 HETATM 22 N N10 9YS . . . D 2 -19.982 20.971 5.807 1 60.03 ? N10 9YS 4000 B 1 HETATM 23 O O11 9YS . . . D 2 -19.745 20.081 7.855 1 60.75 ? O11 9YS 4000 B 1 HETATM 24 C C14 9YS . . . D 2 -22.325 18.796 11.103 1 64.82 ? C14 9YS 4000 B 1 HETATM 25 O O16 9YS . . . D 2 -20.229 20.777 11.662 1 64.85 ? O16 9YS 4000 B 1 HETATM 26 C C25 9YS . . . D 2 -27.788 18.893 10.15 1 62.37 ? C25 9YS 4000 B 1 HETATM 27 C C26 9YS . . . D 2 -28.927 19.704 10.069 1 61.82 ? C26 9YS 4000 B 1 HETATM 28 C C28 9YS . . . D 2 -28.158 20.507 7.936 1 54.99 ? C28 9YS 4000 B 1 HETATM 29 S S29 9YS . . . D 2 -27.803 17.994 11.63 1 68.14 ? S29 9YS 4000 B 1 HETATM 30 C C30 9YS . . . D 2 -29.31 18.761 12.025 1 67.34 ? C30 9YS 4000 B 1 HETATM 31 N N31 9YS . . . D 2 -29.785 19.604 11.167 1 65.1 ? N31 9YS 4000 B 1 # _model_server_stats.io_time_ms 103 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #