data_5W89
#
_model_server_result.job_id            41F0r4tKVxcPh4rzJ0nV4Q 
_model_server_result.datetime_utc      '2024-11-04 20:32:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5w89 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5W89 
#
_exptl.entry_id    5W89 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5W89 
_cell.length_a            43.39 
_cell.length_b            43.39 
_cell.length_c            163.43 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5W89 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ACE 1 B ACE 0 1_555 B N ILE 2 B ILE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 B C TRP 3 B TRP 2 1_555 B N NLE 4 B NLE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 B C NLE 4 B NLE 3 1_555 B N MK8 5 B MK8 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 B C MK8 5 B MK8 4 1_555 B N GLN 6 B GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale5 B CE MK8 5 B MK8 4 1_555 B CE MK8 9 B MK8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 ? 
covale ? covale6 B C LEU 8 B LEU 7 1_555 B N MK8 9 B MK8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale7 B C MK8 9 B MK8 8 1_555 B N ARG 10 B ARG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
metalc ? metalc1 A OE2 GLU 18 A GLU 188 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? 
metalc ? metalc2 A NE2 HIS 54 A HIS 224 1_555 C ZN ZN . A ZN 401 5_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? 
metalc ? metalc3 A OE2 GLU 70 A GLU 240 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc4 A NE2 HIS 82 A HIS 252 1_555 D ZN ZN . A ZN 402 5_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc5 A SG CYS 116 A CYS 286 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc6 C ZN ZN . A ZN 401 1_555 E O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc7 C ZN ZN . A ZN 401 1_555 E O HOH . A HOH 586 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc8 D ZN ZN . A ZN 402 1_555 E O HOH . A HOH 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5W89 
_atom_sites.fract_transf_matrix[1][1]    0.023047 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023047 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006119 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 401 1 ZN ZN . 
D 3 ZN A 1 402 2 ZN ZN . 
E 4 HOH A 1 501 56 HOH HOH . 
E 4 HOH A 2 502 29 HOH HOH . 
E 4 HOH A 3 503 76 HOH HOH . 
E 4 HOH A 4 504 31 HOH HOH . 
E 4 HOH A 5 505 49 HOH HOH . 
E 4 HOH A 6 506 115 HOH HOH . 
E 4 HOH A 7 507 110 HOH HOH . 
E 4 HOH A 8 508 120 HOH HOH . 
E 4 HOH A 9 509 9 HOH HOH . 
E 4 HOH A 10 510 85 HOH HOH . 
E 4 HOH A 11 511 32 HOH HOH . 
E 4 HOH A 12 512 91 HOH HOH . 
E 4 HOH A 13 513 13 HOH HOH . 
E 4 HOH A 14 514 7 HOH HOH . 
E 4 HOH A 15 515 82 HOH HOH . 
E 4 HOH A 16 516 77 HOH HOH . 
E 4 HOH A 17 517 21 HOH HOH . 
E 4 HOH A 18 518 99 HOH HOH . 
E 4 HOH A 19 519 50 HOH HOH . 
E 4 HOH A 20 520 34 HOH HOH . 
E 4 HOH A 21 521 3 HOH HOH . 
E 4 HOH A 22 522 44 HOH HOH . 
E 4 HOH A 23 523 66 HOH HOH . 
E 4 HOH A 24 524 1 HOH HOH . 
E 4 HOH A 25 525 26 HOH HOH . 
E 4 HOH A 26 526 64 HOH HOH . 
E 4 HOH A 27 527 81 HOH HOH . 
E 4 HOH A 28 528 27 HOH HOH . 
E 4 HOH A 29 529 65 HOH HOH . 
E 4 HOH A 30 530 121 HOH HOH . 
E 4 HOH A 31 531 12 HOH HOH . 
E 4 HOH A 32 532 17 HOH HOH . 
E 4 HOH A 33 533 97 HOH HOH . 
E 4 HOH A 34 534 5 HOH HOH . 
E 4 HOH A 35 535 16 HOH HOH . 
E 4 HOH A 36 536 111 HOH HOH . 
E 4 HOH A 37 537 33 HOH HOH . 
E 4 HOH A 38 538 95 HOH HOH . 
E 4 HOH A 39 539 6 HOH HOH . 
E 4 HOH A 40 540 71 HOH HOH . 
E 4 HOH A 41 541 10 HOH HOH . 
E 4 HOH A 42 542 112 HOH HOH . 
E 4 HOH A 43 543 20 HOH HOH . 
E 4 HOH A 44 544 48 HOH HOH . 
E 4 HOH A 45 545 24 HOH HOH . 
E 4 HOH A 46 546 11 HOH HOH . 
E 4 HOH A 47 547 14 HOH HOH . 
E 4 HOH A 48 548 25 HOH HOH . 
E 4 HOH A 49 549 15 HOH HOH . 
E 4 HOH A 50 550 58 HOH HOH . 
E 4 HOH A 51 551 70 HOH HOH . 
E 4 HOH A 52 552 74 HOH HOH . 
E 4 HOH A 53 553 51 HOH HOH . 
E 4 HOH A 54 554 18 HOH HOH . 
E 4 HOH A 55 555 114 HOH HOH . 
E 4 HOH A 56 556 67 HOH HOH . 
E 4 HOH A 57 557 45 HOH HOH . 
E 4 HOH A 58 558 37 HOH HOH . 
E 4 HOH A 59 559 2 HOH HOH . 
E 4 HOH A 60 560 106 HOH HOH . 
E 4 HOH A 61 561 23 HOH HOH . 
E 4 HOH A 62 562 109 HOH HOH . 
E 4 HOH A 63 563 86 HOH HOH . 
E 4 HOH A 64 564 72 HOH HOH . 
E 4 HOH A 65 565 93 HOH HOH . 
E 4 HOH A 66 566 36 HOH HOH . 
E 4 HOH A 67 567 53 HOH HOH . 
E 4 HOH A 68 568 46 HOH HOH . 
E 4 HOH A 69 569 55 HOH HOH . 
E 4 HOH A 70 570 63 HOH HOH . 
E 4 HOH A 71 571 88 HOH HOH . 
E 4 HOH A 72 572 47 HOH HOH . 
E 4 HOH A 73 573 108 HOH HOH . 
E 4 HOH A 74 574 30 HOH HOH . 
E 4 HOH A 75 575 35 HOH HOH . 
E 4 HOH A 76 576 8 HOH HOH . 
E 4 HOH A 77 577 87 HOH HOH . 
E 4 HOH A 78 578 92 HOH HOH . 
E 4 HOH A 79 579 43 HOH HOH . 
E 4 HOH A 80 580 113 HOH HOH . 
E 4 HOH A 81 581 118 HOH HOH . 
E 4 HOH A 82 582 83 HOH HOH . 
E 4 HOH A 83 583 42 HOH HOH . 
E 4 HOH A 84 584 80 HOH HOH . 
E 4 HOH A 85 585 40 HOH HOH . 
E 4 HOH A 86 586 41 HOH HOH . 
E 4 HOH A 87 587 123 HOH HOH . 
E 4 HOH A 88 588 69 HOH HOH . 
E 4 HOH A 89 589 39 HOH HOH . 
E 4 HOH A 90 590 79 HOH HOH . 
E 4 HOH A 91 591 78 HOH HOH . 
E 4 HOH A 92 592 119 HOH HOH . 
E 4 HOH A 93 593 75 HOH HOH . 
E 4 HOH A 94 594 107 HOH HOH . 
E 4 HOH A 95 595 104 HOH HOH . 
E 4 HOH A 96 596 38 HOH HOH . 
E 4 HOH A 97 597 94 HOH HOH . 
E 4 HOH A 98 598 19 HOH HOH . 
E 4 HOH A 99 599 105 HOH HOH . 
E 4 HOH A 100 600 84 HOH HOH . 
E 4 HOH A 101 601 103 HOH HOH . 
E 4 HOH A 102 602 102 HOH HOH . 
E 4 HOH A 103 603 90 HOH HOH . 
E 4 HOH A 104 604 61 HOH HOH . 
E 4 HOH A 105 605 68 HOH HOH . 
E 4 HOH A 106 606 98 HOH HOH . 
F 4 HOH B 1 101 59 HOH HOH . 
F 4 HOH B 2 102 28 HOH HOH . 
F 4 HOH B 3 103 124 HOH HOH . 
F 4 HOH B 4 104 122 HOH HOH . 
F 4 HOH B 5 105 73 HOH HOH . 
F 4 HOH B 6 106 62 HOH HOH . 
F 4 HOH B 7 107 89 HOH HOH . 
F 4 HOH B 8 108 22 HOH HOH . 
F 4 HOH B 9 109 57 HOH HOH . 
F 4 HOH B 10 110 4 HOH HOH . 
F 4 HOH B 11 111 60 HOH HOH . 
F 4 HOH B 12 112 52 HOH HOH . 
F 4 HOH B 13 113 116 HOH HOH . 
F 4 HOH B 14 114 100 HOH HOH . 
F 4 HOH B 15 115 54 HOH HOH . 
F 4 HOH B 16 116 96 HOH HOH . 
F 4 HOH B 17 117 101 HOH HOH . 
F 4 HOH B 18 118 117 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               32.52 
_atom_site.Cartn_y               48.058 
_atom_site.Cartn_z               25.862 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.33 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#