data_5W8E
#
_model_server_result.job_id            Jz78n7szV1V_ttdPJyE5hw 
_model_server_result.datetime_utc      '2024-11-15 00:34:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5w8e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    5W8E 
#
_exptl.entry_id    5W8E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5W8E 
_cell.length_a            91.27 
_cell.length_b            91.27 
_cell.length_c            98.12 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5W8E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 145 n n 
C1 C2 GOL sing 146 n n 
C1 H11 GOL sing 147 n n 
C1 H12 GOL sing 148 n n 
O1 HO1 GOL sing 149 n n 
C2 O2 GOL sing 150 n n 
C2 C3 GOL sing 151 n n 
C2 H2 GOL sing 152 n n 
O2 HO2 GOL sing 153 n n 
C3 O3 GOL sing 154 n n 
C3 H31 GOL sing 155 n n 
C3 H32 GOL sing 156 n n 
O3 HO3 GOL sing 157 n n 
#
_atom_sites.entry_id                     5W8E 
_atom_sites.fract_transf_matrix[1][1]    0.010957 
_atom_sites.fract_transf_matrix[1][2]    0.006326 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012651 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SXZ A 1 301 301 SXZ SXZ . 
C 3 CL A 1 302 302 CL CL . 
D 4 GOL A 1 303 303 GOL GOL . 
E 5 ADE A 1 304 400 ADE ADE . 
F 6 HOH A 1 401 188 HOH HOH . 
F 6 HOH A 2 402 137 HOH HOH . 
F 6 HOH A 3 403 19 HOH HOH . 
F 6 HOH A 4 404 145 HOH HOH . 
F 6 HOH A 5 405 122 HOH HOH . 
F 6 HOH A 6 406 186 HOH HOH . 
F 6 HOH A 7 407 4 HOH HOH . 
F 6 HOH A 8 408 107 HOH HOH . 
F 6 HOH A 9 409 146 HOH HOH . 
F 6 HOH A 10 410 74 HOH HOH . 
F 6 HOH A 11 411 134 HOH HOH . 
F 6 HOH A 12 412 23 HOH HOH . 
F 6 HOH A 13 413 87 HOH HOH . 
F 6 HOH A 14 414 3 HOH HOH . 
F 6 HOH A 15 415 83 HOH HOH . 
F 6 HOH A 16 416 95 HOH HOH . 
F 6 HOH A 17 417 79 HOH HOH . 
F 6 HOH A 18 418 49 HOH HOH . 
F 6 HOH A 19 419 33 HOH HOH . 
F 6 HOH A 20 420 60 HOH HOH . 
F 6 HOH A 21 421 114 HOH HOH . 
F 6 HOH A 22 422 69 HOH HOH . 
F 6 HOH A 23 423 150 HOH HOH . 
F 6 HOH A 24 424 142 HOH HOH . 
F 6 HOH A 25 425 46 HOH HOH . 
F 6 HOH A 26 426 64 HOH HOH . 
F 6 HOH A 27 427 73 HOH HOH . 
F 6 HOH A 28 428 51 HOH HOH . 
F 6 HOH A 29 429 28 HOH HOH . 
F 6 HOH A 30 430 81 HOH HOH . 
F 6 HOH A 31 431 26 HOH HOH . 
F 6 HOH A 32 432 135 HOH HOH . 
F 6 HOH A 33 433 54 HOH HOH . 
F 6 HOH A 34 434 136 HOH HOH . 
F 6 HOH A 35 435 131 HOH HOH . 
F 6 HOH A 36 436 37 HOH HOH . 
F 6 HOH A 37 437 9 HOH HOH . 
F 6 HOH A 38 438 94 HOH HOH . 
F 6 HOH A 39 439 43 HOH HOH . 
F 6 HOH A 40 440 52 HOH HOH . 
F 6 HOH A 41 441 38 HOH HOH . 
F 6 HOH A 42 442 21 HOH HOH . 
F 6 HOH A 43 443 48 HOH HOH . 
F 6 HOH A 44 444 109 HOH HOH . 
F 6 HOH A 45 445 100 HOH HOH . 
F 6 HOH A 46 446 13 HOH HOH . 
F 6 HOH A 47 447 40 HOH HOH . 
F 6 HOH A 48 448 103 HOH HOH . 
F 6 HOH A 49 449 159 HOH HOH . 
F 6 HOH A 50 450 2 HOH HOH . 
F 6 HOH A 51 451 50 HOH HOH . 
F 6 HOH A 52 452 44 HOH HOH . 
F 6 HOH A 53 453 189 HOH HOH . 
F 6 HOH A 54 454 68 HOH HOH . 
F 6 HOH A 55 455 30 HOH HOH . 
F 6 HOH A 56 456 112 HOH HOH . 
F 6 HOH A 57 457 182 HOH HOH . 
F 6 HOH A 58 458 139 HOH HOH . 
F 6 HOH A 59 459 88 HOH HOH . 
F 6 HOH A 60 460 163 HOH HOH . 
F 6 HOH A 61 461 59 HOH HOH . 
F 6 HOH A 62 462 16 HOH HOH . 
F 6 HOH A 63 463 36 HOH HOH . 
F 6 HOH A 64 464 86 HOH HOH . 
F 6 HOH A 65 465 53 HOH HOH . 
F 6 HOH A 66 466 106 HOH HOH . 
F 6 HOH A 67 467 125 HOH HOH . 
F 6 HOH A 68 468 192 HOH HOH . 
F 6 HOH A 69 469 34 HOH HOH . 
F 6 HOH A 70 470 156 HOH HOH . 
F 6 HOH A 71 471 233 HOH HOH . 
F 6 HOH A 72 472 14 HOH HOH . 
F 6 HOH A 73 473 113 HOH HOH . 
F 6 HOH A 74 474 35 HOH HOH . 
F 6 HOH A 75 475 199 HOH HOH . 
F 6 HOH A 76 476 170 HOH HOH . 
F 6 HOH A 77 477 63 HOH HOH . 
F 6 HOH A 78 478 104 HOH HOH . 
F 6 HOH A 79 479 193 HOH HOH . 
F 6 HOH A 80 480 144 HOH HOH . 
F 6 HOH A 81 481 154 HOH HOH . 
F 6 HOH A 82 482 152 HOH HOH . 
F 6 HOH A 83 483 284 HOH HOH . 
F 6 HOH A 84 484 78 HOH HOH . 
F 6 HOH A 85 485 155 HOH HOH . 
F 6 HOH A 86 486 102 HOH HOH . 
F 6 HOH A 87 487 12 HOH HOH . 
F 6 HOH A 88 488 55 HOH HOH . 
F 6 HOH A 89 489 82 HOH HOH . 
F 6 HOH A 90 490 77 HOH HOH . 
F 6 HOH A 91 491 232 HOH HOH . 
F 6 HOH A 92 492 31 HOH HOH . 
F 6 HOH A 93 493 167 HOH HOH . 
F 6 HOH A 94 494 108 HOH HOH . 
F 6 HOH A 95 495 148 HOH HOH . 
F 6 HOH A 96 496 66 HOH HOH . 
F 6 HOH A 97 497 47 HOH HOH . 
F 6 HOH A 98 498 128 HOH HOH . 
F 6 HOH A 99 499 176 HOH HOH . 
F 6 HOH A 100 500 179 HOH HOH . 
F 6 HOH A 101 501 45 HOH HOH . 
F 6 HOH A 102 502 1 HOH HOH . 
F 6 HOH A 103 503 39 HOH HOH . 
F 6 HOH A 104 504 126 HOH HOH . 
F 6 HOH A 105 505 292 HOH HOH . 
F 6 HOH A 106 506 124 HOH HOH . 
F 6 HOH A 107 507 29 HOH HOH . 
F 6 HOH A 108 508 200 HOH HOH . 
F 6 HOH A 109 509 217 HOH HOH . 
F 6 HOH A 110 510 169 HOH HOH . 
F 6 HOH A 111 511 165 HOH HOH . 
F 6 HOH A 112 512 209 HOH HOH . 
F 6 HOH A 113 513 42 HOH HOH . 
F 6 HOH A 114 514 10 HOH HOH . 
F 6 HOH A 115 515 93 HOH HOH . 
F 6 HOH A 116 516 127 HOH HOH . 
F 6 HOH A 117 517 84 HOH HOH . 
F 6 HOH A 118 518 147 HOH HOH . 
F 6 HOH A 119 519 58 HOH HOH . 
F 6 HOH A 120 520 121 HOH HOH . 
F 6 HOH A 121 521 138 HOH HOH . 
F 6 HOH A 122 522 166 HOH HOH . 
F 6 HOH A 123 523 133 HOH HOH . 
F 6 HOH A 124 524 105 HOH HOH . 
F 6 HOH A 125 525 164 HOH HOH . 
F 6 HOH A 126 526 172 HOH HOH . 
F 6 HOH A 127 527 183 HOH HOH . 
F 6 HOH A 128 528 173 HOH HOH . 
F 6 HOH A 129 529 130 HOH HOH . 
F 6 HOH A 130 530 15 HOH HOH . 
F 6 HOH A 131 531 168 HOH HOH . 
F 6 HOH A 132 532 177 HOH HOH . 
F 6 HOH A 133 533 22 HOH HOH . 
F 6 HOH A 134 534 215 HOH HOH . 
F 6 HOH A 135 535 111 HOH HOH . 
F 6 HOH A 136 536 56 HOH HOH . 
F 6 HOH A 137 537 160 HOH HOH . 
F 6 HOH A 138 538 157 HOH HOH . 
F 6 HOH A 139 539 7 HOH HOH . 
F 6 HOH A 140 540 178 HOH HOH . 
F 6 HOH A 141 541 6 HOH HOH . 
F 6 HOH A 142 542 132 HOH HOH . 
F 6 HOH A 143 543 190 HOH HOH . 
F 6 HOH A 144 544 141 HOH HOH . 
F 6 HOH A 145 545 27 HOH HOH . 
F 6 HOH A 146 546 61 HOH HOH . 
F 6 HOH A 147 547 8 HOH HOH . 
F 6 HOH A 148 548 118 HOH HOH . 
F 6 HOH A 149 549 153 HOH HOH . 
F 6 HOH A 150 550 24 HOH HOH . 
F 6 HOH A 151 551 32 HOH HOH . 
F 6 HOH A 152 552 70 HOH HOH . 
F 6 HOH A 153 553 116 HOH HOH . 
F 6 HOH A 154 554 5 HOH HOH . 
F 6 HOH A 155 555 101 HOH HOH . 
F 6 HOH A 156 556 18 HOH HOH . 
F 6 HOH A 157 557 11 HOH HOH . 
F 6 HOH A 158 558 228 HOH HOH . 
F 6 HOH A 159 559 72 HOH HOH . 
F 6 HOH A 160 560 20 HOH HOH . 
F 6 HOH A 161 561 65 HOH HOH . 
F 6 HOH A 162 562 57 HOH HOH . 
F 6 HOH A 163 563 97 HOH HOH . 
F 6 HOH A 164 564 129 HOH HOH . 
F 6 HOH A 165 565 89 HOH HOH . 
F 6 HOH A 166 566 17 HOH HOH . 
F 6 HOH A 167 567 184 HOH HOH . 
F 6 HOH A 168 568 75 HOH HOH . 
F 6 HOH A 169 569 196 HOH HOH . 
F 6 HOH A 170 570 62 HOH HOH . 
F 6 HOH A 171 571 98 HOH HOH . 
F 6 HOH A 172 572 252 HOH HOH . 
F 6 HOH A 173 573 162 HOH HOH . 
F 6 HOH A 174 574 110 HOH HOH . 
F 6 HOH A 175 575 92 HOH HOH . 
F 6 HOH A 176 576 259 HOH HOH . 
F 6 HOH A 177 577 185 HOH HOH . 
F 6 HOH A 178 578 115 HOH HOH . 
F 6 HOH A 179 579 205 HOH HOH . 
F 6 HOH A 180 580 76 HOH HOH . 
F 6 HOH A 181 581 140 HOH HOH . 
F 6 HOH A 182 582 313 HOH HOH . 
F 6 HOH A 183 583 96 HOH HOH . 
F 6 HOH A 184 584 194 HOH HOH . 
F 6 HOH A 185 585 80 HOH HOH . 
F 6 HOH A 186 586 158 HOH HOH . 
F 6 HOH A 187 587 117 HOH HOH . 
F 6 HOH A 188 588 229 HOH HOH . 
F 6 HOH A 189 589 175 HOH HOH . 
F 6 HOH A 190 590 71 HOH HOH . 
F 6 HOH A 191 591 120 HOH HOH . 
F 6 HOH A 192 592 85 HOH HOH . 
F 6 HOH A 193 593 276 HOH HOH . 
F 6 HOH A 194 594 123 HOH HOH . 
F 6 HOH A 195 595 151 HOH HOH . 
F 6 HOH A 196 596 90 HOH HOH . 
F 6 HOH A 197 597 149 HOH HOH . 
F 6 HOH A 198 598 171 HOH HOH . 
F 6 HOH A 199 599 119 HOH HOH . 
F 6 HOH A 200 600 25 HOH HOH . 
F 6 HOH A 201 601 67 HOH HOH . 
F 6 HOH A 202 602 99 HOH HOH . 
F 6 HOH A 203 603 143 HOH HOH . 
F 6 HOH A 204 604 281 HOH HOH . 
F 6 HOH A 205 605 174 HOH HOH . 
F 6 HOH A 206 606 41 HOH HOH . 
F 6 HOH A 207 607 275 HOH HOH . 
F 6 HOH A 208 608 208 HOH HOH . 
F 6 HOH A 209 609 161 HOH HOH . 
F 6 HOH A 210 610 91 HOH HOH . 
F 6 HOH A 211 611 211 HOH HOH . 
F 6 HOH A 212 612 180 HOH HOH . 
F 6 HOH A 213 613 204 HOH HOH . 
F 6 HOH A 214 614 181 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -23.838 17.958 -17.658 1 46.8 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . D 4 -24.43 18.286 -16.396 1 49.05 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . D 4 -23.161 16.598 -17.573 1 43.71 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . D 4 -23.76 15.727 -18.533 1 36.1 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . D 4 -21.67 16.756 -17.86 1 44.43 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . D 4 -20.918 16.667 -16.641 1 45.68 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#