data_5W8F
#
_model_server_result.job_id            J27Cnm6mKayQ84VgDI1a9w 
_model_server_result.datetime_utc      '2024-11-25 21:09:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5w8f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5W8F 
#
_exptl.entry_id    5W8F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5W8F 
_cell.length_a            46.85 
_cell.length_b            46.85 
_cell.length_c            167.44 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5W8F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C TRP 2 B TRP 2 1_555 B N NLE 3 B NLE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale2 B C NLE 3 B NLE 3 1_555 B N MK8 4 B MK8 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale3 B C MK8 4 B MK8 4 1_555 B N GLN 5 B GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale4 B CE MK8 4 B MK8 4 1_555 B CE MK8 8 B MK8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.391 ? 
covale ? covale5 B C LEU 7 B LEU 7 1_555 B N MK8 8 B MK8 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale6 B C MK8 8 B MK8 8 1_555 B N ARG 9 B ARG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
metalc ? metalc1 A NE2 HIS 54 A HIS 224 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc2 A OE2 GLU 70 A GLU 240 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc3 A NE2 HIS 82 A HIS 252 1_555 C ZN ZN . A ZN 401 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc4 A SG CYS 116 A CYS 286 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc5 C ZN ZN . A ZN 401 1_555 E O HOH . A HOH 551 5_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc6 D ZN ZN . A ZN 402 1_555 E O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5W8F 
_atom_sites.fract_transf_matrix[1][1]    0.021345 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021345 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 401 401 ZN ZN . 
D 3 ZN A 1 402 402 ZN ZN . 
E 4 HOH A 1 501 501 HOH HOH . 
E 4 HOH A 2 502 502 HOH HOH . 
E 4 HOH A 3 503 503 HOH HOH . 
E 4 HOH A 4 504 504 HOH HOH . 
E 4 HOH A 5 505 505 HOH HOH . 
E 4 HOH A 6 506 506 HOH HOH . 
E 4 HOH A 7 507 507 HOH HOH . 
E 4 HOH A 8 508 508 HOH HOH . 
E 4 HOH A 9 509 509 HOH HOH . 
E 4 HOH A 10 510 510 HOH HOH . 
E 4 HOH A 11 511 511 HOH HOH . 
E 4 HOH A 12 512 512 HOH HOH . 
E 4 HOH A 13 513 513 HOH HOH . 
E 4 HOH A 14 514 514 HOH HOH . 
E 4 HOH A 15 515 515 HOH HOH . 
E 4 HOH A 16 516 516 HOH HOH . 
E 4 HOH A 17 517 517 HOH HOH . 
E 4 HOH A 18 518 518 HOH HOH . 
E 4 HOH A 19 519 519 HOH HOH . 
E 4 HOH A 20 520 520 HOH HOH . 
E 4 HOH A 21 521 521 HOH HOH . 
E 4 HOH A 22 522 522 HOH HOH . 
E 4 HOH A 23 523 523 HOH HOH . 
E 4 HOH A 24 524 524 HOH HOH . 
E 4 HOH A 25 525 525 HOH HOH . 
E 4 HOH A 26 526 526 HOH HOH . 
E 4 HOH A 27 527 527 HOH HOH . 
E 4 HOH A 28 528 528 HOH HOH . 
E 4 HOH A 29 529 529 HOH HOH . 
E 4 HOH A 30 530 530 HOH HOH . 
E 4 HOH A 31 531 531 HOH HOH . 
E 4 HOH A 32 532 532 HOH HOH . 
E 4 HOH A 33 533 533 HOH HOH . 
E 4 HOH A 34 534 534 HOH HOH . 
E 4 HOH A 35 535 535 HOH HOH . 
E 4 HOH A 36 536 536 HOH HOH . 
E 4 HOH A 37 537 537 HOH HOH . 
E 4 HOH A 38 538 538 HOH HOH . 
E 4 HOH A 39 539 539 HOH HOH . 
E 4 HOH A 40 540 540 HOH HOH . 
E 4 HOH A 41 541 541 HOH HOH . 
E 4 HOH A 42 542 542 HOH HOH . 
E 4 HOH A 43 543 543 HOH HOH . 
E 4 HOH A 44 544 544 HOH HOH . 
E 4 HOH A 45 545 545 HOH HOH . 
E 4 HOH A 46 546 546 HOH HOH . 
E 4 HOH A 47 547 547 HOH HOH . 
E 4 HOH A 48 548 548 HOH HOH . 
E 4 HOH A 49 549 549 HOH HOH . 
E 4 HOH A 50 550 550 HOH HOH . 
E 4 HOH A 51 551 551 HOH HOH . 
E 4 HOH A 52 552 552 HOH HOH . 
E 4 HOH A 53 553 553 HOH HOH . 
E 4 HOH A 54 554 554 HOH HOH . 
E 4 HOH A 55 555 555 HOH HOH . 
E 4 HOH A 56 556 556 HOH HOH . 
E 4 HOH A 57 557 557 HOH HOH . 
E 4 HOH A 58 558 558 HOH HOH . 
F 4 HOH B 1 101 101 HOH HOH . 
F 4 HOH B 2 102 102 HOH HOH . 
F 4 HOH B 3 103 103 HOH HOH . 
F 4 HOH B 4 104 104 HOH HOH . 
F 4 HOH B 5 105 105 HOH HOH . 
F 4 HOH B 6 106 106 HOH HOH . 
F 4 HOH B 7 107 107 HOH HOH . 
F 4 HOH B 8 108 108 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               33.908 
_atom_site.Cartn_y               13.019 
_atom_site.Cartn_z               17.024 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        79.1 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#