data_5W9E # _model_server_result.job_id 6aW-4xDRXbjTr6lTlx5Mrg _model_server_result.datetime_utc '2024-11-15 16:24:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5w9e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5W9E # _exptl.entry_id 5W9E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 333.839 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-tert-butyl-3-[(3-chlorophenyl)sulfanyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.57 _cell.angle_gamma 90 _cell.entry_id 5W9E _cell.length_a 47.997 _cell.length_b 72.802 _cell.length_c 64.595 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W9E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H16 Cl N5 S' _chem_comp.formula_weight 333.839 _chem_comp.id 9YJ _chem_comp.mon_nstd_flag . _chem_comp.name 1-tert-butyl-3-[(3-chlorophenyl)sulfanyl]-1H-pyrazolo[3,4-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAL CAI 9YJ sing 1 n n CAJ CAI 9YJ sing 2 n n CAI NAH 9YJ sing 3 n n CAI CAK 9YJ sing 4 n n NAG NAH 9YJ sing 5 n y NAG CAF 9YJ doub 6 n y NAH C6 9YJ sing 7 n y SAE CAF 9YJ sing 8 n n SAE CAD 9YJ sing 9 n n C6 C5 9YJ doub 10 n y C6 N1 9YJ sing 11 n y CAF C5 9YJ sing 12 n y C5 C4 9YJ sing 13 n y N1 C2 9YJ doub 14 n y C4 NAR 9YJ sing 15 n n C4 N3 9YJ doub 16 n y C2 N3 9YJ sing 17 n y CAD CAC 9YJ doub 18 n y CAD CAT 9YJ sing 19 n y CAC CAB 9YJ sing 20 n y CAT CAU 9YJ doub 21 n y CAB CL 9YJ sing 22 n n CAB CAV 9YJ doub 23 n y CAU CAV 9YJ sing 24 n y CAJ H1 9YJ sing 25 n n CAJ H2 9YJ sing 26 n n CAJ H3 9YJ sing 27 n n CAK H4 9YJ sing 28 n n CAK H5 9YJ sing 29 n n CAK H6 9YJ sing 30 n n CAL H7 9YJ sing 31 n n CAL H8 9YJ sing 32 n n CAL H9 9YJ sing 33 n n C2 H11 9YJ sing 34 n n NAR H12 9YJ sing 35 n n NAR H13 9YJ sing 36 n n CAC H15 9YJ sing 37 n n CAV H16 9YJ sing 38 n n CAU H17 9YJ sing 39 n n CAT H18 9YJ sing 40 n n # _atom_sites.entry_id 5W9E _atom_sites.fract_transf_matrix[1][1] 0.020835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00314 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9YJ A 1 601 601 9YJ 9YJ . C 3 HOH A 1 701 45 HOH HOH . C 3 HOH A 2 702 24 HOH HOH . C 3 HOH A 3 703 25 HOH HOH . C 3 HOH A 4 704 32 HOH HOH . C 3 HOH A 5 705 24 HOH HOH . C 3 HOH A 6 706 37 HOH HOH . C 3 HOH A 7 707 65 HOH HOH . C 3 HOH A 8 708 34 HOH HOH . C 3 HOH A 9 709 52 HOH HOH . C 3 HOH A 10 710 31 HOH HOH . C 3 HOH A 11 711 51 HOH HOH . C 3 HOH A 12 712 32 HOH HOH . C 3 HOH A 13 713 42 HOH HOH . C 3 HOH A 14 714 63 HOH HOH . C 3 HOH A 15 715 47 HOH HOH . C 3 HOH A 16 716 53 HOH HOH . C 3 HOH A 17 717 60 HOH HOH . C 3 HOH A 18 718 33 HOH HOH . C 3 HOH A 19 719 21 HOH HOH . C 3 HOH A 20 720 36 HOH HOH . C 3 HOH A 21 721 16 HOH HOH . C 3 HOH A 22 722 35 HOH HOH . C 3 HOH A 23 723 22 HOH HOH . C 3 HOH A 24 724 54 HOH HOH . C 3 HOH A 25 725 38 HOH HOH . C 3 HOH A 26 726 39 HOH HOH . C 3 HOH A 27 727 23 HOH HOH . C 3 HOH A 28 728 55 HOH HOH . C 3 HOH A 29 729 34 HOH HOH . C 3 HOH A 30 730 22 HOH HOH . C 3 HOH A 31 731 27 HOH HOH . C 3 HOH A 32 732 25 HOH HOH . C 3 HOH A 33 733 28 HOH HOH . C 3 HOH A 34 734 64 HOH HOH . C 3 HOH A 35 735 36 HOH HOH . C 3 HOH A 36 736 49 HOH HOH . C 3 HOH A 37 737 7 HOH HOH . C 3 HOH A 38 738 43 HOH HOH . C 3 HOH A 39 739 44 HOH HOH . C 3 HOH A 40 740 28 HOH HOH . C 3 HOH A 41 741 50 HOH HOH . C 3 HOH A 42 742 29 HOH HOH . C 3 HOH A 43 743 56 HOH HOH . C 3 HOH A 44 744 59 HOH HOH . C 3 HOH A 45 745 39 HOH HOH . C 3 HOH A 46 746 21 HOH HOH . C 3 HOH A 47 747 40 HOH HOH . C 3 HOH A 48 748 62 HOH HOH . C 3 HOH A 49 749 7 HOH HOH . C 3 HOH A 50 750 2 HOH HOH . C 3 HOH A 51 751 27 HOH HOH . C 3 HOH A 52 752 33 HOH HOH . C 3 HOH A 53 753 30 HOH HOH . C 3 HOH A 54 754 61 HOH HOH . C 3 HOH A 55 755 48 HOH HOH . C 3 HOH A 56 756 31 HOH HOH . C 3 HOH A 57 757 19 HOH HOH . C 3 HOH A 58 758 58 HOH HOH . C 3 HOH A 59 759 41 HOH HOH . C 3 HOH A 60 760 35 HOH HOH . C 3 HOH A 61 761 23 HOH HOH . C 3 HOH A 62 762 57 HOH HOH . C 3 HOH A 63 763 30 HOH HOH . C 3 HOH A 64 764 12 HOH HOH . C 3 HOH A 65 765 20 HOH HOH . C 3 HOH A 66 766 29 HOH HOH . C 3 HOH A 67 767 4 HOH HOH . C 3 HOH A 68 768 37 HOH HOH . C 3 HOH A 69 769 46 HOH HOH . C 3 HOH A 70 770 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 9YJ . . . B 2 -7.22 -18.811 94.033 1 48.22 ? C4 9YJ 601 A 1 HETATM 2 C C5 9YJ . . . B 2 -7.132 -17.442 93.68 1 48.51 ? C5 9YJ 601 A 1 HETATM 3 C C6 9YJ . . . B 2 -5.829 -16.934 93.517 1 49.66 ? C6 9YJ 601 A 1 HETATM 4 N N1 9YJ . . . B 2 -4.685 -17.613 93.683 1 50.1 ? N1 9YJ 601 A 1 HETATM 5 N N3 9YJ . . . B 2 -6.077 -19.516 94.185 1 49.27 ? N3 9YJ 601 A 1 HETATM 6 C CAJ 9YJ . . . B 2 -5.601 -13.287 92.493 1 50.14 ? CAJ 9YJ 601 A 1 HETATM 7 C CAI 9YJ . . . B 2 -4.933 -14.649 92.668 1 49.58 ? CAI 9YJ 601 A 1 HETATM 8 C CAK 9YJ . . . B 2 -4.246 -15.058 91.37 1 49.7 ? CAK 9YJ 601 A 1 HETATM 9 C CAL 9YJ . . . B 2 -3.898 -14.559 93.782 1 48.99 ? CAL 9YJ 601 A 1 HETATM 10 N NAH 9YJ . . . B 2 -5.967 -15.685 93.025 1 49.25 ? NAH 9YJ 601 A 1 HETATM 11 N NAG 9YJ . . . B 2 -7.296 -15.375 92.84 1 48.58 ? NAG 9YJ 601 A 1 HETATM 12 C C2 9YJ . . . B 2 -4.908 -18.889 94.011 1 50.41 ? C2 9YJ 601 A 1 HETATM 13 N NAR 9YJ . . . B 2 -8.381 -19.463 94.142 1 47.74 ? NAR 9YJ 601 A 1 HETATM 14 C CAF 9YJ . . . B 2 -8.092 -16.322 93.215 1 48.57 ? CAF 9YJ 601 A 1 HETATM 15 S SAE 9YJ . . . B 2 -9.817 -15.911 93.336 1 48.42 ? SAE 9YJ 601 A 1 HETATM 16 C CAD 9YJ . . . B 2 -10.474 -16.609 94.829 1 46.69 ? CAD 9YJ 601 A 1 HETATM 17 C CAC 9YJ . . . B 2 -11.856 -16.529 94.97 1 47.21 ? CAC 9YJ 601 A 1 HETATM 18 C CAB 9YJ . . . B 2 -12.409 -16.735 96.218 1 47.89 ? CAB 9YJ 601 A 1 HETATM 19 CL CL 9YJ . . . B 2 -14.112 -16.444 96.44 1 49.74 ? CL 9YJ 601 A 1 HETATM 20 C CAV 9YJ . . . B 2 -11.639 -17.083 97.307 1 46.74 ? CAV 9YJ 601 A 1 HETATM 21 C CAU 9YJ . . . B 2 -10.267 -17.185 97.148 1 46.07 ? CAU 9YJ 601 A 1 HETATM 22 C CAT 9YJ . . . B 2 -9.683 -16.954 95.916 1 46.05 ? CAT 9YJ 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #