data_5WB5
#
_model_server_result.job_id            rmcBaY5rPY6EfMr0dsXhxA 
_model_server_result.datetime_utc      '2025-04-28 10:15:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wb5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    5WB5 
#
_exptl.entry_id    5WB5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5WB5 
_cell.length_a            68.22 
_cell.length_b            68.22 
_cell.length_c            220.2 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WB5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 237 n n 
C1 C2 PEG sing 238 n n 
C1 H11 PEG sing 239 n n 
C1 H12 PEG sing 240 n n 
O1 HO1 PEG sing 241 n n 
C2 O2 PEG sing 242 n n 
C2 H21 PEG sing 243 n n 
C2 H22 PEG sing 244 n n 
O2 C3 PEG sing 245 n n 
C3 C4 PEG sing 246 n n 
C3 H31 PEG sing 247 n n 
C3 H32 PEG sing 248 n n 
C4 O4 PEG sing 249 n n 
C4 H41 PEG sing 250 n n 
C4 H42 PEG sing 251 n n 
O4 HO4 PEG sing 252 n n 
#
_atom_sites.entry_id                     5WB5 
_atom_sites.fract_transf_matrix[1][1]    0.014658 
_atom_sites.fract_transf_matrix[1][2]    0.008463 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016926 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004541 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PEG A 1 301 1 PEG PEG . 
D 4 HOH A 1 401 15 HOH HOH . 
D 4 HOH A 2 402 5 HOH HOH . 
D 4 HOH A 3 403 2 HOH HOH . 
D 4 HOH A 4 404 4 HOH HOH . 
D 4 HOH A 5 405 20 HOH HOH . 
D 4 HOH A 6 406 21 HOH HOH . 
D 4 HOH A 7 407 10 HOH HOH . 
D 4 HOH A 8 408 6 HOH HOH . 
D 4 HOH A 9 409 7 HOH HOH . 
D 4 HOH A 10 410 13 HOH HOH . 
D 4 HOH A 11 411 14 HOH HOH . 
D 4 HOH A 12 412 18 HOH HOH . 
D 4 HOH A 13 413 19 HOH HOH . 
D 4 HOH A 14 414 17 HOH HOH . 
D 4 HOH A 15 415 11 HOH HOH . 
D 4 HOH A 16 416 16 HOH HOH . 
D 4 HOH A 17 417 1 HOH HOH . 
E 4 HOH B 1 101 9 HOH HOH . 
E 4 HOH B 2 102 3 HOH HOH . 
E 4 HOH B 3 103 12 HOH HOH . 
E 4 HOH B 4 104 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . C 3 -8.928 31.392 26.637 1 63.24 ? C1 PEG 301 A 1 
HETATM 2 O O1 PEG . . . C 3 -9.897 30.494 27.106 1 69.48 ? O1 PEG 301 A 1 
HETATM 3 C C2 PEG . . . C 3 -8.758 31.223 25.128 1 48.94 ? C2 PEG 301 A 1 
HETATM 4 O O2 PEG . . . C 3 -10.006 31.303 24.496 1 59.97 ? O2 PEG 301 A 1 
HETATM 5 C C3 PEG . . . C 3 -9.936 31.363 23.098 1 53.36 ? C3 PEG 301 A 1 
HETATM 6 C C4 PEG . . . C 3 -11.333 31.572 22.511 1 67.73 ? C4 PEG 301 A 1 
HETATM 7 O O4 PEG . . . C 3 -12.143 30.455 22.76 1 58.83 ? O4 PEG 301 A 1 
HETATM 8 H H11 PEG . . . C 3 -8.083 31.215 27.079 1 77.25 ? H11 PEG 301 A 1 
HETATM 9 H H12 PEG . . . C 3 -9.209 32.3 26.831 1 77.25 ? H12 PEG 301 A 1 
HETATM 10 H HO1 PEG . . . C 3 -9.675 29.701 26.893 1 84.74 ? HO1 PEG 301 A 1 
HETATM 11 H H21 PEG . . . C 3 -8.359 30.358 24.944 1 60.1 ? H21 PEG 301 A 1 
HETATM 12 H H22 PEG . . . C 3 -8.179 31.923 24.788 1 60.1 ? H22 PEG 301 A 1 
HETATM 13 H H31 PEG . . . C 3 -9.565 30.532 22.76 1 65.4 ? H31 PEG 301 A 1 
HETATM 14 H H32 PEG . . . C 3 -9.363 32.1 22.836 1 65.4 ? H32 PEG 301 A 1 
HETATM 15 H H41 PEG . . . C 3 -11.26 31.707 21.553 1 82.64 ? H41 PEG 301 A 1 
HETATM 16 H H42 PEG . . . C 3 -11.736 32.356 22.915 1 82.64 ? H42 PEG 301 A 1 
HETATM 17 H HO4 PEG . . . C 3 -11.743 29.927 23.293 1 71.96 ? HO4 PEG 301 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           483 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           17 
#