data_5WBE # _model_server_result.job_id tS9WWjnT_DNRTYnJFRs5AA _model_server_result.datetime_utc '2024-11-19 13:20:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wbe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":803}' # _entry.id 5WBE # _exptl.entry_id 5WBE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.342 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Mofezolac _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5WBE _cell.length_a 180.925 _cell.length_b 180.925 _cell.length_c 104.248 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WBE _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 K N N ? 6 M N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 2 MAN NAG C1 O1 . O4 HO4 . sing 4 ? 3 4 3 MAN MAN C1 O1 . O6 HO6 . sing 5 ? 3 5 4 MAN MAN C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG C 661 NAG 2 n C NAG 2 C 2 NAG C 662 NAG 3 n D NAG 1 D 1 NAG C 671 NAG 3 n D NAG 2 D 2 NAG C 672 NAG 3 n D MAN 3 D 3 MAN C 673 MAN 3 n D MAN 4 D 4 MAN C 674 MAN 3 n D MAN 5 D 5 MAN C 675 MAN 2 n E NAG 1 E 1 NAG C 681 NAG 2 n E NAG 2 E 2 NAG C 682 NAG 2 n F NAG 1 F 1 NAG D 1661 NAG 2 n F NAG 2 F 2 NAG D 1662 NAG 3 n G NAG 1 G 1 NAG D 1671 NAG 3 n G NAG 2 G 2 NAG D 1672 NAG 3 n G MAN 3 G 3 MAN D 1673 MAN 3 n G MAN 4 G 4 MAN D 1674 MAN 3 n G MAN 5 G 5 MAN D 1675 MAN 2 n H NAG 1 H 1 NAG D 1681 NAG 2 n H NAG 2 H 2 NAG D 1682 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 36 A CYS 36 1_555 A SG CYS 47 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 37 A CYS 37 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 41 A CYS 41 1_555 A SG CYS 57 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 59 A CYS 59 1_555 A SG CYS 69 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 569 A CYS 569 1_555 A SG CYS 575 A CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 B SG CYS 36 B CYS 36 1_555 B SG CYS 47 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 B SG CYS 37 B CYS 37 1_555 B SG CYS 159 B CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 B SG CYS 41 B CYS 41 1_555 B SG CYS 57 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 59 B CYS 59 1_555 B SG CYS 69 B CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 569 B CYS 569 1_555 B SG CYS 575 B CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 68 A ASN 68 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale2 A ND2 ASN 144 A ASN 144 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 A ND2 ASN 410 A ASN 410 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 B ND2 ASN 68 B ASN 68 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? covale ? covale5 B ND2 ASN 144 B ASN 144 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale6 B ND2 ASN 410 B ASN 410 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale7 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale8 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale9 D O4 NAG . D NAG 2 1_555 D C1 MAN . D MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale10 D O6 MAN . D MAN 3 1_555 D C1 MAN . D MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale11 D O6 MAN . D MAN 4 1_555 D C1 MAN . D MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale12 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale13 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale14 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale15 G O4 NAG . G NAG 2 1_555 G C1 MAN . G MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale16 G O6 MAN . G MAN 3 1_555 G C1 MAN . G MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale17 G O6 MAN . G MAN 4 1_555 G C1 MAN . G MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale18 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? metalc ? metalc1 A NE2 HIS 388 A HIS 388 1_555 I FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc2 B NE2 HIS 388 B HIS 388 1_555 L FE HEM . B HEM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'C19 H17 N O5' _chem_comp.formula_weight 339.342 _chem_comp.id 63X _chem_comp.mon_nstd_flag . _chem_comp.name Mofezolac _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[3,4-bis(4-methoxyphenyl)-1,2-oxazol-5-yl]acetic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 N2 63X sing 1 n y O1 C3 63X sing 2 n y N2 C4 63X doub 3 n y O25 C23 63X doub 4 n n C3 C22 63X sing 5 n n C3 C5 63X doub 6 n y C22 C23 63X sing 7 n n C23 O24 63X sing 8 n n C4 C6 63X sing 9 n n C4 C5 63X sing 10 n y C7 C8 63X doub 11 n y C7 C6 63X sing 12 n y C8 C9 63X sing 13 n y C6 C11 63X doub 14 n y C5 C12 63X sing 15 n n C9 O18 63X sing 16 n n C9 C10 63X doub 17 n y C11 C10 63X sing 18 n y O18 C20 63X sing 19 n n C12 C13 63X doub 20 n y C12 C17 63X sing 21 n y C13 C14 63X sing 22 n y C17 C16 63X doub 23 n y C14 C15 63X doub 24 n y C16 C15 63X sing 25 n y C15 O19 63X sing 26 n n O19 C21 63X sing 27 n n C14 H1 63X sing 28 n n C20 H2 63X sing 29 n n C20 H3 63X sing 30 n n C20 H4 63X sing 31 n n C10 H5 63X sing 32 n n C7 H6 63X sing 33 n n C8 H7 63X sing 34 n n C11 H8 63X sing 35 n n C16 H9 63X sing 36 n n C22 H10 63X sing 37 n n C22 H11 63X sing 38 n n C13 H12 63X sing 39 n n C17 H13 63X sing 40 n n C21 H14 63X sing 41 n n C21 H15 63X sing 42 n n C21 H16 63X sing 43 n n O24 H17 63X sing 44 n n # _atom_sites.entry_id 5WBE _atom_sites.fract_transf_matrix[1][1] 0.005527 _atom_sites.fract_transf_matrix[1][2] 0.003191 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 HEM A 1 801 801 HEM HEM . J 5 BOG A 1 802 751 BOG BOG . K 6 63X A 1 803 1 63X MOF . L 4 HEM B 1 701 601 HEM HEM . M 6 63X B 1 702 2 63X MOF . N 5 BOG B 1 703 1751 BOG BOG . O 5 BOG B 1 704 1750 BOG BOG . P 7 HOH A 1 901 15 HOH HOH . P 7 HOH A 2 902 11 HOH HOH . P 7 HOH A 3 903 16 HOH HOH . P 7 HOH A 4 904 26 HOH HOH . P 7 HOH A 5 905 5 HOH HOH . P 7 HOH A 6 906 34 HOH HOH . P 7 HOH A 7 907 23 HOH HOH . P 7 HOH A 8 908 35 HOH HOH . P 7 HOH A 9 909 30 HOH HOH . P 7 HOH A 10 910 29 HOH HOH . P 7 HOH A 11 911 32 HOH HOH . P 7 HOH A 12 912 39 HOH HOH . P 7 HOH A 13 913 31 HOH HOH . P 7 HOH A 14 914 6 HOH HOH . P 7 HOH A 15 915 13 HOH HOH . P 7 HOH A 16 916 22 HOH HOH . P 7 HOH A 17 917 25 HOH HOH . P 7 HOH A 18 918 7 HOH HOH . P 7 HOH A 19 919 17 HOH HOH . P 7 HOH A 20 920 27 HOH HOH . Q 7 HOH B 1 801 8 HOH HOH . Q 7 HOH B 2 802 14 HOH HOH . Q 7 HOH B 3 803 18 HOH HOH . Q 7 HOH B 4 804 1 HOH HOH . Q 7 HOH B 5 805 10 HOH HOH . Q 7 HOH B 6 806 3 HOH HOH . Q 7 HOH B 7 807 2 HOH HOH . Q 7 HOH B 8 808 33 HOH HOH . Q 7 HOH B 9 809 4 HOH HOH . Q 7 HOH B 10 810 28 HOH HOH . Q 7 HOH B 11 811 12 HOH HOH . Q 7 HOH B 12 812 19 HOH HOH . Q 7 HOH B 13 813 38 HOH HOH . Q 7 HOH B 14 814 21 HOH HOH . Q 7 HOH B 15 815 24 HOH HOH . Q 7 HOH B 16 816 36 HOH HOH . Q 7 HOH B 17 817 9 HOH HOH . Q 7 HOH B 18 818 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 63X . . . K 6 38.685 163.882 30.727 1 65.87 ? C15 63X 803 A 1 HETATM 2 C C14 63X . . . K 6 39.637 163.349 29.882 1 66.33 ? C14 63X 803 A 1 HETATM 3 C C20 63X . . . K 6 31.711 160.957 28.322 1 84.96 ? C20 63X 803 A 1 HETATM 4 C C6 63X . . . K 6 35.442 163.176 26.177 1 71.11 ? C6 63X 803 A 1 HETATM 5 C C9 63X . . . K 6 32.92 162.412 26.99 1 65.11 ? C9 63X 803 A 1 HETATM 6 C C3 63X . . . K 6 38.989 164.077 25.442 1 77.18 ? C3 63X 803 A 1 HETATM 7 C C10 63X . . . K 6 34.035 161.715 27.436 1 59.49 ? C10 63X 803 A 1 HETATM 8 C C7 63X . . . K 6 34.33 163.862 25.714 1 67.44 ? C7 63X 803 A 1 HETATM 9 C C8 63X . . . K 6 33.063 163.487 26.131 1 60.77 ? C8 63X 803 A 1 HETATM 10 C C5 63X . . . K 6 38.033 163.792 26.449 1 68.53 ? C5 63X 803 A 1 HETATM 11 C C12 63X . . . K 6 38.242 163.81 27.972 1 62.47 ? C12 63X 803 A 1 HETATM 12 C C11 63X . . . K 6 35.297 162.09 27.022 1 66 ? C11 63X 803 A 1 HETATM 13 C C16 63X . . . K 6 37.502 164.381 30.201 1 62.34 ? C16 63X 803 A 1 HETATM 14 C C22 63X . . . K 6 40.471 164.398 25.611 1 81.45 ? C22 63X 803 A 1 HETATM 15 O O1 63X . . . K 6 38.417 163.97 24.281 1 79.13 ? O1 63X 803 A 1 HETATM 16 N N2 63X . . . K 6 37.154 163.664 24.417 1 77.65 ? N2 63X 803 A 1 HETATM 17 C C4 63X . . . K 6 36.831 163.553 25.698 1 70.05 ? C4 63X 803 A 1 HETATM 18 C C13 63X . . . K 6 39.416 163.316 28.518 1 64.77 ? C13 63X 803 A 1 HETATM 19 C C17 63X . . . K 6 37.288 164.355 28.826 1 59.67 ? C17 63X 803 A 1 HETATM 20 O O18 63X . . . K 6 31.649 162.019 27.416 1 68.01 ? O18 63X 803 A 1 HETATM 21 O O19 63X . . . K 6 38.948 163.889 32.1 1 69.28 ? O19 63X 803 A 1 HETATM 22 C C21 63X . . . K 6 37.893 164.291 32.918 1 80.94 ? C21 63X 803 A 1 HETATM 23 C C23 63X . . . K 6 41.202 163.046 25.654 1 74.62 ? C23 63X 803 A 1 HETATM 24 O O24 63X . . . K 6 41.925 162.715 26.635 1 69.42 ? O24 63X 803 A 1 HETATM 25 O O25 63X . . . K 6 41.06 162.233 24.701 1 63.21 ? O25 63X 803 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 453 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #