data_5WBN
#
_model_server_result.job_id            sM3SuxPTeQDCUblbkP5Pcw 
_model_server_result.datetime_utc      '2024-11-22 23:10:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wbn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1303}' 
#
_entry.id    5WBN 
#
_exptl.entry_id    5WBN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5WBN 
_cell.length_a            40.85 
_cell.length_b            43.74 
_cell.length_c            55.76 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WBN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 7 A CYS 1113 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 A ND1 HIS 9 A HIS 1115 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc3 A SG CYS 27 A CYS 1133 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc4 A SG CYS 30 A CYS 1136 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc5 A SG CYS 39 A CYS 1145 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc6 A SG CYS 42 A CYS 1148 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc7 A SG CYS 47 A CYS 1153 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc8 A ND1 HIS 54 A HIS 1160 1_555 C ZN ZN . A ZN 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc9 A NE2 HIS 58 A HIS 1164 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc10 A ND1 HIS 64 A HIS 1170 1_555 B ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc11 A SG CYS 77 A CYS 1183 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc12 A SG CYS 80 A CYS 1186 1_555 D ZN ZN . A ZN 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5WBN 
_atom_sites.fract_transf_matrix[1][1]    0.02448 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022862 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017934 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1301 1301 ZN ZN . 
C 2 ZN A 1 1302 1302 ZN ZN . 
D 2 ZN A 1 1303 1303 ZN ZN . 
E 3 9ZV A 1 1304 1 9ZV 111 . 
F 4 UNX A 1 1305 1 UNX UNX . 
G 4 UNX A 1 1306 3 UNX UNX . 
H 4 UNX A 1 1307 4 UNX UNX . 
I 4 UNX A 1 1308 5 UNX UNX . 
J 4 UNX A 1 1309 6 UNX UNX . 
K 4 UNX A 1 1310 7 UNX UNX . 
L 4 UNX A 1 1311 8 UNX UNX . 
M 4 UNX A 1 1312 9 UNX UNX . 
N 5 FMT A 1 1313 2 FMT FMT . 
O 5 FMT A 1 1314 3 FMT FMT . 
P 5 FMT A 1 1315 4 FMT FMT . 
Q 6 CL A 1 1316 1 CL CL . 
R 7 ACT A 1 1317 1 ACT ACT . 
S 7 ACT A 1 1318 2 ACT ACT . 
T 8 HOH A 1 1401 117 HOH HOH . 
T 8 HOH A 2 1402 149 HOH HOH . 
T 8 HOH A 3 1403 136 HOH HOH . 
T 8 HOH A 4 1404 168 HOH HOH . 
T 8 HOH A 5 1405 103 HOH HOH . 
T 8 HOH A 6 1406 112 HOH HOH . 
T 8 HOH A 7 1407 82 HOH HOH . 
T 8 HOH A 8 1408 141 HOH HOH . 
T 8 HOH A 9 1409 160 HOH HOH . 
T 8 HOH A 10 1410 1402 HOH HOH . 
T 8 HOH A 11 1411 163 HOH HOH . 
T 8 HOH A 12 1412 106 HOH HOH . 
T 8 HOH A 13 1413 140 HOH HOH . 
T 8 HOH A 14 1414 138 HOH HOH . 
T 8 HOH A 15 1415 159 HOH HOH . 
T 8 HOH A 16 1416 107 HOH HOH . 
T 8 HOH A 17 1417 96 HOH HOH . 
T 8 HOH A 18 1418 125 HOH HOH . 
T 8 HOH A 19 1419 1 HOH HOH . 
T 8 HOH A 20 1420 150 HOH HOH . 
T 8 HOH A 21 1421 43 HOH HOH . 
T 8 HOH A 22 1422 165 HOH HOH . 
T 8 HOH A 23 1423 66 HOH HOH . 
T 8 HOH A 24 1424 1412 HOH HOH . 
T 8 HOH A 25 1425 71 HOH HOH . 
T 8 HOH A 26 1426 1418 HOH HOH . 
T 8 HOH A 27 1427 1409 HOH HOH . 
T 8 HOH A 28 1428 142 HOH HOH . 
T 8 HOH A 29 1429 53 HOH HOH . 
T 8 HOH A 30 1430 1413 HOH HOH . 
T 8 HOH A 31 1431 156 HOH HOH . 
T 8 HOH A 32 1432 1432 HOH HOH . 
T 8 HOH A 33 1433 75 HOH HOH . 
T 8 HOH A 34 1434 68 HOH HOH . 
T 8 HOH A 35 1435 118 HOH HOH . 
T 8 HOH A 36 1436 1441 HOH HOH . 
T 8 HOH A 37 1437 1406 HOH HOH . 
T 8 HOH A 38 1438 50 HOH HOH . 
T 8 HOH A 39 1439 46 HOH HOH . 
T 8 HOH A 40 1440 121 HOH HOH . 
T 8 HOH A 41 1441 137 HOH HOH . 
T 8 HOH A 42 1442 119 HOH HOH . 
T 8 HOH A 43 1443 131 HOH HOH . 
T 8 HOH A 44 1444 72 HOH HOH . 
T 8 HOH A 45 1445 38 HOH HOH . 
T 8 HOH A 46 1446 157 HOH HOH . 
T 8 HOH A 47 1447 1427 HOH HOH . 
T 8 HOH A 48 1448 1434 HOH HOH . 
T 8 HOH A 49 1449 62 HOH HOH . 
T 8 HOH A 50 1450 108 HOH HOH . 
T 8 HOH A 51 1451 65 HOH HOH . 
T 8 HOH A 52 1452 1437 HOH HOH . 
T 8 HOH A 53 1453 1443 HOH HOH . 
T 8 HOH A 54 1454 1410 HOH HOH . 
T 8 HOH A 55 1455 1444 HOH HOH . 
T 8 HOH A 56 1456 1439 HOH HOH . 
T 8 HOH A 57 1457 1416 HOH HOH . 
T 8 HOH A 58 1458 63 HOH HOH . 
T 8 HOH A 59 1459 1421 HOH HOH . 
T 8 HOH A 60 1460 61 HOH HOH . 
T 8 HOH A 61 1461 89 HOH HOH . 
T 8 HOH A 62 1462 94 HOH HOH . 
T 8 HOH A 63 1463 49 HOH HOH . 
T 8 HOH A 64 1464 1420 HOH HOH . 
T 8 HOH A 65 1465 101 HOH HOH . 
T 8 HOH A 66 1466 1419 HOH HOH . 
T 8 HOH A 67 1467 69 HOH HOH . 
T 8 HOH A 68 1468 145 HOH HOH . 
T 8 HOH A 69 1469 57 HOH HOH . 
T 8 HOH A 70 1470 1425 HOH HOH . 
T 8 HOH A 71 1471 1428 HOH HOH . 
T 8 HOH A 72 1472 60 HOH HOH . 
T 8 HOH A 73 1473 100 HOH HOH . 
T 8 HOH A 74 1474 1458 HOH HOH . 
T 8 HOH A 75 1475 166 HOH HOH . 
T 8 HOH A 76 1476 76 HOH HOH . 
T 8 HOH A 77 1477 84 HOH HOH . 
T 8 HOH A 78 1478 1447 HOH HOH . 
T 8 HOH A 79 1479 105 HOH HOH . 
T 8 HOH A 80 1480 130 HOH HOH . 
T 8 HOH A 81 1481 1440 HOH HOH . 
T 8 HOH A 82 1482 99 HOH HOH . 
T 8 HOH A 83 1483 95 HOH HOH . 
T 8 HOH A 84 1484 1429 HOH HOH . 
T 8 HOH A 85 1485 122 HOH HOH . 
T 8 HOH A 86 1486 44 HOH HOH . 
T 8 HOH A 87 1487 1424 HOH HOH . 
T 8 HOH A 88 1488 114 HOH HOH . 
T 8 HOH A 89 1489 54 HOH HOH . 
T 8 HOH A 90 1490 158 HOH HOH . 
T 8 HOH A 91 1491 73 HOH HOH . 
T 8 HOH A 92 1492 1411 HOH HOH . 
T 8 HOH A 93 1493 79 HOH HOH . 
T 8 HOH A 94 1494 1461 HOH HOH . 
T 8 HOH A 95 1495 146 HOH HOH . 
T 8 HOH A 96 1496 135 HOH HOH . 
T 8 HOH A 97 1497 67 HOH HOH . 
T 8 HOH A 98 1498 78 HOH HOH . 
T 8 HOH A 99 1499 17 HOH HOH . 
T 8 HOH A 100 1500 41 HOH HOH . 
T 8 HOH A 101 1501 85 HOH HOH . 
T 8 HOH A 102 1502 70 HOH HOH . 
T 8 HOH A 103 1503 152 HOH HOH . 
T 8 HOH A 104 1504 1460 HOH HOH . 
T 8 HOH A 105 1505 139 HOH HOH . 
T 8 HOH A 106 1506 110 HOH HOH . 
T 8 HOH A 107 1507 154 HOH HOH . 
T 8 HOH A 108 1508 81 HOH HOH . 
T 8 HOH A 109 1509 16 HOH HOH . 
T 8 HOH A 110 1510 83 HOH HOH . 
T 8 HOH A 111 1511 102 HOH HOH . 
T 8 HOH A 112 1512 153 HOH HOH . 
T 8 HOH A 113 1513 74 HOH HOH . 
T 8 HOH A 114 1514 164 HOH HOH . 
T 8 HOH A 115 1515 144 HOH HOH . 
T 8 HOH A 116 1516 124 HOH HOH . 
T 8 HOH A 117 1517 134 HOH HOH . 
T 8 HOH A 118 1518 90 HOH HOH . 
T 8 HOH A 119 1519 87 HOH HOH . 
T 8 HOH A 120 1520 88 HOH HOH . 
T 8 HOH A 121 1521 80 HOH HOH . 
T 8 HOH A 122 1522 111 HOH HOH . 
T 8 HOH A 123 1523 120 HOH HOH . 
T 8 HOH A 124 1524 167 HOH HOH . 
T 8 HOH A 125 1525 161 HOH HOH . 
T 8 HOH A 126 1526 97 HOH HOH . 
T 8 HOH A 127 1527 132 HOH HOH . 
T 8 HOH A 128 1528 127 HOH HOH . 
T 8 HOH A 129 1529 91 HOH HOH . 
T 8 HOH A 130 1530 113 HOH HOH . 
T 8 HOH A 131 1531 1478 HOH HOH . 
T 8 HOH A 132 1532 64 HOH HOH . 
T 8 HOH A 133 1533 116 HOH HOH . 
T 8 HOH A 134 1534 92 HOH HOH . 
T 8 HOH A 135 1535 109 HOH HOH . 
T 8 HOH A 136 1536 129 HOH HOH . 
T 8 HOH A 137 1537 98 HOH HOH . 
T 8 HOH A 138 1538 155 HOH HOH . 
T 8 HOH A 139 1539 115 HOH HOH . 
T 8 HOH A 140 1540 151 HOH HOH . 
T 8 HOH A 141 1541 147 HOH HOH . 
T 8 HOH A 142 1542 86 HOH HOH . 
T 8 HOH A 143 1543 126 HOH HOH . 
T 8 HOH A 144 1544 77 HOH HOH . 
T 8 HOH A 145 1545 133 HOH HOH . 
T 8 HOH A 146 1546 162 HOH HOH . 
T 8 HOH A 147 1547 143 HOH HOH . 
T 8 HOH A 148 1548 104 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -0.584 
_atom_site.Cartn_y               -5.825 
_atom_site.Cartn_z               -1.398 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        5.52 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1303 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#