data_5WBP # _model_server_result.job_id xwIR9VHJK3Hdv1lweW64Lg _model_server_result.datetime_utc '2024-12-11 09:57:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wbp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5WBP # _exptl.entry_id 5WBP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 214.144 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(trifluoromethyl)quinoxalin-2(1H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WBP _cell.length_a 82.91 _cell.length_b 85.02 _cell.length_c 138.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WBP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H5 F3 N2 O' _chem_comp.formula_weight 214.144 _chem_comp.id A2J _chem_comp.mon_nstd_flag . _chem_comp.name 3-(trifluoromethyl)quinoxalin-2(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 A2J doub 1 n y C2 C3 A2J sing 2 n y C1 C6 A2J sing 3 n y C3 C4 A2J doub 4 n y C6 C5 A2J doub 5 n y C4 C5 A2J sing 6 n y C4 N2 A2J sing 7 n n C5 N1 A2J sing 8 n n N2 C8 A2J doub 9 n n C8 C9 A2J sing 10 n n C8 C7 A2J sing 11 n n F1 C9 A2J sing 12 n n N1 C7 A2J sing 13 n n F3 C9 A2J sing 14 n n C9 F2 A2J sing 15 n n C7 O1 A2J doub 16 n n C6 H5 A2J sing 17 n n C1 H2 A2J sing 18 n n C2 H3 A2J sing 19 n n C3 H4 A2J sing 20 n n N1 H1 A2J sing 21 n n # _atom_sites.entry_id 5WBP _atom_sites.fract_transf_matrix[1][1] 0.012061 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A2J A 1 301 1 A2J PFE . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 B 1 301 2 SO4 SO4 . F 3 SO4 B 1 302 3 SO4 SO4 . G 3 SO4 B 1 303 4 SO4 SO4 . H 3 SO4 B 1 304 5 SO4 SO4 . I 4 GOL B 1 305 1 GOL GOL . J 5 HOH A 1 401 6 HOH HOH . J 5 HOH A 2 402 9 HOH HOH . J 5 HOH A 3 403 8 HOH HOH . J 5 HOH A 4 404 22 HOH HOH . J 5 HOH A 5 405 23 HOH HOH . J 5 HOH A 6 406 2 HOH HOH . J 5 HOH A 7 407 7 HOH HOH . J 5 HOH A 8 408 3 HOH HOH . J 5 HOH A 9 409 21 HOH HOH . K 5 HOH B 1 401 19 HOH HOH . K 5 HOH B 2 402 11 HOH HOH . K 5 HOH B 3 403 5 HOH HOH . K 5 HOH B 4 404 1 HOH HOH . K 5 HOH B 5 405 24 HOH HOH . K 5 HOH B 6 406 18 HOH HOH . K 5 HOH B 7 407 13 HOH HOH . K 5 HOH B 8 408 10 HOH HOH . K 5 HOH B 9 409 25 HOH HOH . K 5 HOH B 10 410 20 HOH HOH . K 5 HOH B 11 411 16 HOH HOH . K 5 HOH B 12 412 15 HOH HOH . K 5 HOH B 13 413 4 HOH HOH . K 5 HOH B 14 414 17 HOH HOH . K 5 HOH B 15 415 14 HOH HOH . K 5 HOH B 16 416 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A2J . . . C 2 -3.171 -0.891 18.261 1 123.26 ? C4 A2J 301 A 1 HETATM 2 N N2 A2J . . . C 2 -2.955 -2.142 18.832 1 121.88 ? N2 A2J 301 A 1 HETATM 3 C C7 A2J . . . C 2 -4.721 -1.623 20.492 1 123.92 ? C7 A2J 301 A 1 HETATM 4 C C6 A2J . . . C 2 -4.31 1.258 18.219 1 124.29 ? C6 A2J 301 A 1 HETATM 5 C C9 A2J . . . C 2 -3.539 -3.908 20.37 1 119.94 ? C9 A2J 301 A 1 HETATM 6 C C8 A2J . . . C 2 -3.693 -2.5 19.874 1 121.85 ? C8 A2J 301 A 1 HETATM 7 C C1 A2J . . . C 2 -3.608 1.591 17.067 1 123.46 ? C1 A2J 301 A 1 HETATM 8 C C2 A2J . . . C 2 -2.72 0.692 16.5 1 122.97 ? C2 A2J 301 A 1 HETATM 9 C C3 A2J . . . C 2 -2.498 -0.548 17.085 1 123.03 ? C3 A2J 301 A 1 HETATM 10 C C5 A2J . . . C 2 -4.099 0.013 18.808 1 124.17 ? C5 A2J 301 A 1 HETATM 11 N N1 A2J . . . C 2 -4.84 -0.403 19.913 1 124.23 ? N1 A2J 301 A 1 HETATM 12 O O1 A2J . . . C 2 -5.461 -1.972 21.418 1 124.23 ? O1 A2J 301 A 1 HETATM 13 F F1 A2J . . . C 2 -2.443 -4.496 19.898 1 118.03 ? F1 A2J 301 A 1 HETATM 14 F F2 A2J . . . C 2 -3.434 -3.975 21.687 1 122.38 ? F2 A2J 301 A 1 HETATM 15 F F3 A2J . . . C 2 -4.567 -4.662 20.032 1 117.96 ? F3 A2J 301 A 1 HETATM 16 H H5 A2J . . . C 2 -5.015 1.969 18.647 1 124.38 ? H5 A2J 301 A 1 HETATM 17 H H2 A2J . . . C 2 -3.758 2.572 16.617 1 123.35 ? H2 A2J 301 A 1 HETATM 18 H H3 A2J . . . C 2 -2.187 0.955 15.587 1 122.97 ? H3 A2J 301 A 1 HETATM 19 H H4 A2J . . . C 2 -1.818 -1.261 16.623 1 122.91 ? H4 A2J 301 A 1 HETATM 20 H H1 A2J . . . C 2 -5.516 0.249 20.3 1 123.98 ? H1 A2J 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #