data_5WBV
#
_model_server_result.job_id            01dCebWn9DPQ5cpipPhmqQ 
_model_server_result.datetime_utc      '2025-07-01 15:13:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5wbv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":406}' 
#
_entry.id    5WBV 
#
_exptl.entry_id    5WBV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              ? 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'UNKNOWN ATOM OR ION' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         101.26 
_cell.angle_beta          107.51 
_cell.angle_gamma         89.67 
_cell.entry_id            5WBV 
_cell.length_a            46.324 
_cell.length_b            50.559 
_cell.length_c            74.818 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5WBV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,U 1 1 
B,L,M,N,O,P,Q,R,S,T,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 213 A CYS 275 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? 
metalc ? metalc2 A SG CYS 257 A CYS 319 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? 
metalc ? metalc3 A SG CYS 259 A CYS 321 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc4 A SG CYS 262 A CYS 324 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc5 B SG CYS 213 B CYS 275 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc6 B SG CYS 257 B CYS 319 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc7 B SG CYS 259 B CYS 321 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
metalc ? metalc8 B SG CYS 262 B CYS 324 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? 
#
_chem_comp.formula           ? 
_chem_comp.formula_weight    ? 
_chem_comp.id                UNX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'UNKNOWN ATOM OR ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5WBV 
_atom_sites.fract_transf_matrix[1][1]    0.021587 
_atom_sites.fract_transf_matrix[1][2]    -0.000124 
_atom_sites.fract_transf_matrix[1][3]    0.006929 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019779 
_atom_sites.fract_transf_matrix[2][3]    0.004099 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014313 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 400 ZN ZN . 
D 3 SAM A 1 402 500 SAM SAM . 
E 4 9ZY A 1 403 600 9ZY XXX . 
F 5 UNX A 1 404 33 UNX UNX . 
G 5 UNX A 1 405 34 UNX UNX . 
H 5 UNX A 1 406 36 UNX UNX . 
I 5 UNX A 1 407 37 UNX UNX . 
J 5 UNX A 1 408 41 UNX UNX . 
K 5 UNX A 1 409 42 UNX UNX . 
L 2 ZN B 1 401 400 ZN ZN . 
M 3 SAM B 1 402 500 SAM SAM . 
N 4 9ZY B 1 403 600 9ZY XXX . 
O 5 UNX B 1 404 32 UNX UNX . 
P 5 UNX B 1 405 38 UNX UNX . 
Q 5 UNX B 1 406 39 UNX UNX . 
R 5 UNX B 1 407 40 UNX UNX . 
S 5 UNX B 1 408 43 UNX UNX . 
T 5 UNX B 1 409 44 UNX UNX . 
U 6 HOH A 1 501 20 HOH HOH . 
U 6 HOH A 2 502 1 HOH HOH . 
U 6 HOH A 3 503 24 HOH HOH . 
U 6 HOH A 4 504 13 HOH HOH . 
U 6 HOH A 5 505 25 HOH HOH . 
U 6 HOH A 6 506 2 HOH HOH . 
U 6 HOH A 7 507 26 HOH HOH . 
U 6 HOH A 8 508 9 HOH HOH . 
U 6 HOH A 9 509 21 HOH HOH . 
U 6 HOH A 10 510 17 HOH HOH . 
U 6 HOH A 11 511 27 HOH HOH . 
U 6 HOH A 12 512 6 HOH HOH . 
U 6 HOH A 13 513 28 HOH HOH . 
U 6 HOH A 14 514 22 HOH HOH . 
U 6 HOH A 15 515 11 HOH HOH . 
U 6 HOH A 16 516 14 HOH HOH . 
U 6 HOH A 17 517 4 HOH HOH . 
U 6 HOH A 18 518 31 HOH HOH . 
U 6 HOH A 19 519 10 HOH HOH . 
U 6 HOH A 20 520 29 HOH HOH . 
V 6 HOH B 1 501 3 HOH HOH . 
V 6 HOH B 2 502 5 HOH HOH . 
V 6 HOH B 3 503 16 HOH HOH . 
V 6 HOH B 4 504 7 HOH HOH . 
V 6 HOH B 5 505 30 HOH HOH . 
V 6 HOH B 6 506 8 HOH HOH . 
V 6 HOH B 7 507 15 HOH HOH . 
V 6 HOH B 8 508 12 HOH HOH . 
V 6 HOH B 9 509 19 HOH HOH . 
V 6 HOH B 10 510 23 HOH HOH . 
V 6 HOH B 11 511 18 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           X 
_atom_site.label_atom_id         UNK 
_atom_site.label_comp_id         UNX 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         Q 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               6.479 
_atom_site.Cartn_y               20.298 
_atom_site.Cartn_z               -45.349 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        46.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          UNK 
_atom_site.auth_comp_id          UNX 
_atom_site.auth_seq_id           406 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#