data_5WBZ # _model_server_result.job_id 412b1koMNmnX6zG8H12eew _model_server_result.datetime_utc '2024-12-21 16:51:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wbz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":304}' # _entry.id 5WBZ # _exptl.entry_id 5WBZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WBZ _cell.length_a 83.18 _cell.length_b 86.38 _cell.length_c 137.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WBZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 117 n n C1 O2 CIT sing 118 n n C1 C2 CIT sing 119 n n O2 HO2 CIT sing 120 n n C2 C3 CIT sing 121 n n C2 H21 CIT sing 122 n n C2 H22 CIT sing 123 n n C3 O7 CIT sing 124 n n C3 C4 CIT sing 125 n n C3 C6 CIT sing 126 n n O7 HO7 CIT sing 127 n n C4 C5 CIT sing 128 n n C4 H41 CIT sing 129 n n C4 H42 CIT sing 130 n n C5 O3 CIT doub 131 n n C5 O4 CIT sing 132 n n O4 HO4 CIT sing 133 n n C6 O5 CIT doub 134 n n C6 O6 CIT sing 135 n n O6 HO6 CIT sing 136 n n # _atom_sites.entry_id 5WBZ _atom_sites.fract_transf_matrix[1][1] 0.012022 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011577 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A4J A 1 301 1 A4J PFE . D 3 SO4 A 1 302 2 SO4 SO4 . E 4 CIT A 1 303 1 CIT CIT . F 2 A4J B 1 301 2 A4J PFE . G 3 SO4 B 1 302 1 SO4 SO4 . H 3 SO4 B 1 303 3 SO4 SO4 . I 4 CIT B 1 304 2 CIT CIT . J 5 HOH A 1 401 89 HOH HOH . J 5 HOH A 2 402 66 HOH HOH . J 5 HOH A 3 403 28 HOH HOH . J 5 HOH A 4 404 92 HOH HOH . J 5 HOH A 5 405 151 HOH HOH . J 5 HOH A 6 406 107 HOH HOH . J 5 HOH A 7 407 127 HOH HOH . J 5 HOH A 8 408 12 HOH HOH . J 5 HOH A 9 409 90 HOH HOH . J 5 HOH A 10 410 22 HOH HOH . J 5 HOH A 11 411 105 HOH HOH . J 5 HOH A 12 412 118 HOH HOH . J 5 HOH A 13 413 128 HOH HOH . J 5 HOH A 14 414 30 HOH HOH . J 5 HOH A 15 415 88 HOH HOH . J 5 HOH A 16 416 53 HOH HOH . J 5 HOH A 17 417 91 HOH HOH . J 5 HOH A 18 418 6 HOH HOH . J 5 HOH A 19 419 86 HOH HOH . J 5 HOH A 20 420 44 HOH HOH . J 5 HOH A 21 421 41 HOH HOH . J 5 HOH A 22 422 122 HOH HOH . J 5 HOH A 23 423 115 HOH HOH . J 5 HOH A 24 424 119 HOH HOH . J 5 HOH A 25 425 27 HOH HOH . J 5 HOH A 26 426 14 HOH HOH . J 5 HOH A 27 427 67 HOH HOH . J 5 HOH A 28 428 78 HOH HOH . J 5 HOH A 29 429 120 HOH HOH . J 5 HOH A 30 430 43 HOH HOH . J 5 HOH A 31 431 48 HOH HOH . J 5 HOH A 32 432 39 HOH HOH . J 5 HOH A 33 433 147 HOH HOH . J 5 HOH A 34 434 47 HOH HOH . J 5 HOH A 35 435 173 HOH HOH . J 5 HOH A 36 436 106 HOH HOH . J 5 HOH A 37 437 2 HOH HOH . J 5 HOH A 38 438 77 HOH HOH . J 5 HOH A 39 439 149 HOH HOH . J 5 HOH A 40 440 1 HOH HOH . J 5 HOH A 41 441 73 HOH HOH . J 5 HOH A 42 442 84 HOH HOH . J 5 HOH A 43 443 171 HOH HOH . J 5 HOH A 44 444 38 HOH HOH . J 5 HOH A 45 445 61 HOH HOH . J 5 HOH A 46 446 110 HOH HOH . J 5 HOH A 47 447 70 HOH HOH . J 5 HOH A 48 448 96 HOH HOH . J 5 HOH A 49 449 124 HOH HOH . J 5 HOH A 50 450 126 HOH HOH . J 5 HOH A 51 451 85 HOH HOH . J 5 HOH A 52 452 62 HOH HOH . J 5 HOH A 53 453 114 HOH HOH . J 5 HOH A 54 454 108 HOH HOH . J 5 HOH A 55 455 46 HOH HOH . J 5 HOH A 56 456 71 HOH HOH . J 5 HOH A 57 457 33 HOH HOH . J 5 HOH A 58 458 150 HOH HOH . J 5 HOH A 59 459 154 HOH HOH . J 5 HOH A 60 460 23 HOH HOH . J 5 HOH A 61 461 159 HOH HOH . J 5 HOH A 62 462 172 HOH HOH . J 5 HOH A 63 463 87 HOH HOH . J 5 HOH A 64 464 8 HOH HOH . J 5 HOH A 65 465 145 HOH HOH . J 5 HOH A 66 466 123 HOH HOH . J 5 HOH A 67 467 42 HOH HOH . J 5 HOH A 68 468 175 HOH HOH . J 5 HOH A 69 469 155 HOH HOH . J 5 HOH A 70 470 80 HOH HOH . J 5 HOH A 71 471 152 HOH HOH . J 5 HOH A 72 472 174 HOH HOH . J 5 HOH A 73 473 98 HOH HOH . J 5 HOH A 74 474 176 HOH HOH . J 5 HOH A 75 475 153 HOH HOH . J 5 HOH A 76 476 170 HOH HOH . J 5 HOH A 77 477 82 HOH HOH . J 5 HOH A 78 478 83 HOH HOH . K 5 HOH B 1 401 138 HOH HOH . K 5 HOH B 2 402 177 HOH HOH . K 5 HOH B 3 403 165 HOH HOH . K 5 HOH B 4 404 139 HOH HOH . K 5 HOH B 5 405 13 HOH HOH . K 5 HOH B 6 406 142 HOH HOH . K 5 HOH B 7 407 54 HOH HOH . K 5 HOH B 8 408 29 HOH HOH . K 5 HOH B 9 409 75 HOH HOH . K 5 HOH B 10 410 99 HOH HOH . K 5 HOH B 11 411 16 HOH HOH . K 5 HOH B 12 412 17 HOH HOH . K 5 HOH B 13 413 95 HOH HOH . K 5 HOH B 14 414 24 HOH HOH . K 5 HOH B 15 415 31 HOH HOH . K 5 HOH B 16 416 37 HOH HOH . K 5 HOH B 17 417 50 HOH HOH . K 5 HOH B 18 418 130 HOH HOH . K 5 HOH B 19 419 65 HOH HOH . K 5 HOH B 20 420 81 HOH HOH . K 5 HOH B 21 421 143 HOH HOH . K 5 HOH B 22 422 136 HOH HOH . K 5 HOH B 23 423 19 HOH HOH . K 5 HOH B 24 424 104 HOH HOH . K 5 HOH B 25 425 94 HOH HOH . K 5 HOH B 26 426 129 HOH HOH . K 5 HOH B 27 427 56 HOH HOH . K 5 HOH B 28 428 10 HOH HOH . K 5 HOH B 29 429 20 HOH HOH . K 5 HOH B 30 430 93 HOH HOH . K 5 HOH B 31 431 113 HOH HOH . K 5 HOH B 32 432 157 HOH HOH . K 5 HOH B 33 433 64 HOH HOH . K 5 HOH B 34 434 55 HOH HOH . K 5 HOH B 35 435 148 HOH HOH . K 5 HOH B 36 436 158 HOH HOH . K 5 HOH B 37 437 141 HOH HOH . K 5 HOH B 38 438 49 HOH HOH . K 5 HOH B 39 439 100 HOH HOH . K 5 HOH B 40 440 168 HOH HOH . K 5 HOH B 41 441 51 HOH HOH . K 5 HOH B 42 442 9 HOH HOH . K 5 HOH B 43 443 26 HOH HOH . K 5 HOH B 44 444 156 HOH HOH . K 5 HOH B 45 445 97 HOH HOH . K 5 HOH B 46 446 34 HOH HOH . K 5 HOH B 47 447 36 HOH HOH . K 5 HOH B 48 448 167 HOH HOH . K 5 HOH B 49 449 69 HOH HOH . K 5 HOH B 50 450 3 HOH HOH . K 5 HOH B 51 451 11 HOH HOH . K 5 HOH B 52 452 4 HOH HOH . K 5 HOH B 53 453 140 HOH HOH . K 5 HOH B 54 454 5 HOH HOH . K 5 HOH B 55 455 121 HOH HOH . K 5 HOH B 56 456 72 HOH HOH . K 5 HOH B 57 457 32 HOH HOH . K 5 HOH B 58 458 76 HOH HOH . K 5 HOH B 59 459 68 HOH HOH . K 5 HOH B 60 460 45 HOH HOH . K 5 HOH B 61 461 57 HOH HOH . K 5 HOH B 62 462 60 HOH HOH . K 5 HOH B 63 463 112 HOH HOH . K 5 HOH B 64 464 21 HOH HOH . K 5 HOH B 65 465 58 HOH HOH . K 5 HOH B 66 466 35 HOH HOH . K 5 HOH B 67 467 18 HOH HOH . K 5 HOH B 68 468 117 HOH HOH . K 5 HOH B 69 469 163 HOH HOH . K 5 HOH B 70 470 144 HOH HOH . K 5 HOH B 71 471 79 HOH HOH . K 5 HOH B 72 472 134 HOH HOH . K 5 HOH B 73 473 63 HOH HOH . K 5 HOH B 74 474 164 HOH HOH . K 5 HOH B 75 475 25 HOH HOH . K 5 HOH B 76 476 101 HOH HOH . K 5 HOH B 77 477 166 HOH HOH . K 5 HOH B 78 478 52 HOH HOH . K 5 HOH B 79 479 146 HOH HOH . K 5 HOH B 80 480 161 HOH HOH . K 5 HOH B 81 481 131 HOH HOH . K 5 HOH B 82 482 15 HOH HOH . K 5 HOH B 83 483 7 HOH HOH . K 5 HOH B 84 484 102 HOH HOH . K 5 HOH B 85 485 59 HOH HOH . K 5 HOH B 86 486 116 HOH HOH . K 5 HOH B 87 487 137 HOH HOH . K 5 HOH B 88 488 103 HOH HOH . K 5 HOH B 89 489 111 HOH HOH . K 5 HOH B 90 490 162 HOH HOH . K 5 HOH B 91 491 132 HOH HOH . K 5 HOH B 92 492 109 HOH HOH . K 5 HOH B 93 493 40 HOH HOH . K 5 HOH B 94 494 160 HOH HOH . K 5 HOH B 95 495 135 HOH HOH . K 5 HOH B 96 496 169 HOH HOH . K 5 HOH B 97 497 125 HOH HOH . K 5 HOH B 98 498 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . I 4 -18.322 34.802 67.439 1 77.92 ? C1 CIT 304 B 1 HETATM 2 O O1 CIT . . . I 4 -19.201 35.636 67.468 1 79.21 ? O1 CIT 304 B 1 HETATM 3 O O2 CIT . . . I 4 -18.44 33.655 68.018 1 75.31 ? O2 CIT 304 B 1 HETATM 4 C C2 CIT . . . I 4 -17.015 34.945 66.682 1 79.8 ? C2 CIT 304 B 1 HETATM 5 C C3 CIT . . . I 4 -16.216 36.253 66.78 1 83.68 ? C3 CIT 304 B 1 HETATM 6 O O7 CIT . . . I 4 -15.548 36.292 68.043 1 83.75 ? O7 CIT 304 B 1 HETATM 7 C C4 CIT . . . I 4 -15.169 36.219 65.66 1 82.17 ? C4 CIT 304 B 1 HETATM 8 C C5 CIT . . . I 4 -14.143 37.324 65.717 1 80.98 ? C5 CIT 304 B 1 HETATM 9 O O3 CIT . . . I 4 -13.919 37.865 64.543 1 83.19 ? O3 CIT 304 B 1 HETATM 10 O O4 CIT . . . I 4 -13.58 37.674 66.751 1 77.41 ? O4 CIT 304 B 1 HETATM 11 C C6 CIT . . . I 4 -17.089 37.501 66.615 1 88.26 ? C6 CIT 304 B 1 HETATM 12 O O5 CIT . . . I 4 -17.891 37.621 65.698 1 90.7 ? O5 CIT 304 B 1 HETATM 13 O O6 CIT . . . I 4 -16.856 38.441 67.511 1 88.26 ? O6 CIT 304 B 1 HETATM 14 H H21 CIT . . . I 4 -16.352 34.118 66.929 1 79.41 ? H21 CIT 304 B 1 HETATM 15 H H22 CIT . . . I 4 -17.251 34.766 65.636 1 79.83 ? H22 CIT 304 B 1 HETATM 16 H HO7 CIT . . . I 4 -16.238 36.315 68.756 1 83.89 ? HO7 CIT 304 B 1 HETATM 17 H H41 CIT . . . I 4 -15.66 36.208 64.688 1 81.78 ? H41 CIT 304 B 1 HETATM 18 H H42 CIT . . . I 4 -14.644 35.268 65.71 1 82.39 ? H42 CIT 304 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #