data_5WCF # _model_server_result.job_id U7Wvah_p0kwsyUsJrZpnSw _model_server_result.datetime_utc '2025-06-21 09:37:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wcf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5WCF # _exptl.entry_id 5WCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.266 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R)-4-(5-bromofuran-2-carbonyl)-5-(4-fluorophenyl)-7-methyl-1,3,4,5-tetrahydro-2H-1,4-benzodiazepin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WCF _cell.length_a 94.721 _cell.length_b 94.721 _cell.length_c 108.713 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 51 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 50 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 230 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 229 _struct_conn.ptnr2_symmetry 6_565 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.569 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H16 Br F N2 O3' _chem_comp.formula_weight 443.266 _chem_comp.id A0S _chem_comp.mon_nstd_flag . _chem_comp.name (5R)-4-(5-bromofuran-2-carbonyl)-5-(4-fluorophenyl)-7-methyl-1,3,4,5-tetrahydro-2H-1,4-benzodiazepin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 A0S sing 20 n n C2 C1 A0S doub 21 n y C2 C3 A0S sing 22 n y C1 C20 A0S sing 23 n y C3 C4 A0S doub 24 n y C20 C19 A0S doub 25 n y C4 C19 A0S sing 26 n y C4 N A0S sing 27 n n C19 C12 A0S sing 28 n n N C5 A0S sing 29 n n C6 C5 A0S sing 30 n n C6 N1 A0S sing 31 n n O1 C7 A0S doub 32 n n C5 O A0S doub 33 n n N1 C7 A0S sing 34 n n N1 C12 A0S sing 35 n n C7 C8 A0S sing 36 n n C12 C13 A0S sing 37 n n O2 C8 A0S sing 38 n y O2 C11 A0S sing 39 n y C8 C9 A0S doub 40 n y C13 C18 A0S doub 41 n y C13 C14 A0S sing 42 n y C18 C17 A0S sing 43 n y C11 BR A0S sing 44 n n C11 C10 A0S doub 45 n y C9 C10 A0S sing 46 n y C14 C15 A0S doub 47 n y C17 C16 A0S doub 48 n y C15 C16 A0S sing 49 n y C16 F A0S sing 50 n n C6 H1 A0S sing 51 n n C6 H2 A0S sing 52 n n C9 H3 A0S sing 53 n n C10 H4 A0S sing 54 n n C12 H5 A0S sing 55 n n C14 H6 A0S sing 56 n n C15 H7 A0S sing 57 n n C17 H8 A0S sing 58 n n C18 H9 A0S sing 59 n n C3 H10 A0S sing 60 n n C2 H11 A0S sing 61 n n C20 H12 A0S sing 62 n n C H13 A0S sing 63 n n C H14 A0S sing 64 n n C H15 A0S sing 65 n n N H16 A0S sing 66 n n # _atom_sites.entry_id 5WCF _atom_sites.fract_transf_matrix[1][1] 0.010557 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010557 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH A 1 401 401 SAH SAH . C 3 A0S A 1 402 1 A0S XXX . D 4 144 A 1 403 1 144 144 . E 5 HOH A 1 501 54 HOH HOH . E 5 HOH A 2 502 98 HOH HOH . E 5 HOH A 3 503 27 HOH HOH . E 5 HOH A 4 504 25 HOH HOH . E 5 HOH A 5 505 46 HOH HOH . E 5 HOH A 6 506 51 HOH HOH . E 5 HOH A 7 507 43 HOH HOH . E 5 HOH A 8 508 45 HOH HOH . E 5 HOH A 9 509 92 HOH HOH . E 5 HOH A 10 510 57 HOH HOH . E 5 HOH A 11 511 22 HOH HOH . E 5 HOH A 12 512 47 HOH HOH . E 5 HOH A 13 513 48 HOH HOH . E 5 HOH A 14 514 29 HOH HOH . E 5 HOH A 15 515 71 HOH HOH . E 5 HOH A 16 516 50 HOH HOH . E 5 HOH A 17 517 7 HOH HOH . E 5 HOH A 18 518 18 HOH HOH . E 5 HOH A 19 519 63 HOH HOH . E 5 HOH A 20 520 83 HOH HOH . E 5 HOH A 21 521 15 HOH HOH . E 5 HOH A 22 522 8 HOH HOH . E 5 HOH A 23 523 14 HOH HOH . E 5 HOH A 24 524 53 HOH HOH . E 5 HOH A 25 525 96 HOH HOH . E 5 HOH A 26 526 30 HOH HOH . E 5 HOH A 27 527 56 HOH HOH . E 5 HOH A 28 528 82 HOH HOH . E 5 HOH A 29 529 36 HOH HOH . E 5 HOH A 30 530 55 HOH HOH . E 5 HOH A 31 531 2 HOH HOH . E 5 HOH A 32 532 67 HOH HOH . E 5 HOH A 33 533 91 HOH HOH . E 5 HOH A 34 534 95 HOH HOH . E 5 HOH A 35 535 24 HOH HOH . E 5 HOH A 36 536 11 HOH HOH . E 5 HOH A 37 537 1 HOH HOH . E 5 HOH A 38 538 21 HOH HOH . E 5 HOH A 39 539 28 HOH HOH . E 5 HOH A 40 540 81 HOH HOH . E 5 HOH A 41 541 35 HOH HOH . E 5 HOH A 42 542 72 HOH HOH . E 5 HOH A 43 543 31 HOH HOH . E 5 HOH A 44 544 26 HOH HOH . E 5 HOH A 45 545 75 HOH HOH . E 5 HOH A 46 546 38 HOH HOH . E 5 HOH A 47 547 65 HOH HOH . E 5 HOH A 48 548 102 HOH HOH . E 5 HOH A 49 549 79 HOH HOH . E 5 HOH A 50 550 37 HOH HOH . E 5 HOH A 51 551 89 HOH HOH . E 5 HOH A 52 552 6 HOH HOH . E 5 HOH A 53 553 34 HOH HOH . E 5 HOH A 54 554 101 HOH HOH . E 5 HOH A 55 555 80 HOH HOH . E 5 HOH A 56 556 61 HOH HOH . E 5 HOH A 57 557 16 HOH HOH . E 5 HOH A 58 558 10 HOH HOH . E 5 HOH A 59 559 3 HOH HOH . E 5 HOH A 60 560 20 HOH HOH . E 5 HOH A 61 561 62 HOH HOH . E 5 HOH A 62 562 84 HOH HOH . E 5 HOH A 63 563 40 HOH HOH . E 5 HOH A 64 564 49 HOH HOH . E 5 HOH A 65 565 97 HOH HOH . E 5 HOH A 66 566 5 HOH HOH . E 5 HOH A 67 567 78 HOH HOH . E 5 HOH A 68 568 66 HOH HOH . E 5 HOH A 69 569 9 HOH HOH . E 5 HOH A 70 570 68 HOH HOH . E 5 HOH A 71 571 13 HOH HOH . E 5 HOH A 72 572 33 HOH HOH . E 5 HOH A 73 573 41 HOH HOH . E 5 HOH A 74 574 39 HOH HOH . E 5 HOH A 75 575 17 HOH HOH . E 5 HOH A 76 576 19 HOH HOH . E 5 HOH A 77 577 32 HOH HOH . E 5 HOH A 78 578 59 HOH HOH . E 5 HOH A 79 579 77 HOH HOH . E 5 HOH A 80 580 12 HOH HOH . E 5 HOH A 81 581 99 HOH HOH . E 5 HOH A 82 582 74 HOH HOH . E 5 HOH A 83 583 70 HOH HOH . E 5 HOH A 84 584 88 HOH HOH . E 5 HOH A 85 585 90 HOH HOH . E 5 HOH A 86 586 42 HOH HOH . E 5 HOH A 87 587 60 HOH HOH . E 5 HOH A 88 588 86 HOH HOH . E 5 HOH A 89 589 44 HOH HOH . E 5 HOH A 90 590 64 HOH HOH . E 5 HOH A 91 591 76 HOH HOH . E 5 HOH A 92 592 93 HOH HOH . E 5 HOH A 93 593 69 HOH HOH . E 5 HOH A 94 594 4 HOH HOH . E 5 HOH A 95 595 58 HOH HOH . E 5 HOH A 96 596 85 HOH HOH . E 5 HOH A 97 597 23 HOH HOH . E 5 HOH A 98 598 100 HOH HOH . E 5 HOH A 99 599 94 HOH HOH . E 5 HOH A 100 600 73 HOH HOH . E 5 HOH A 101 601 52 HOH HOH . E 5 HOH A 102 602 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A0S . . . C 3 22.434 43.03 -0.318 0.7 38.35 ? C4 A0S 402 A 1 HETATM 2 C C5 A0S . . . C 3 20.901 44.508 0.966 0.7 37.78 ? C5 A0S 402 A 1 HETATM 3 C C6 A0S . . . C 3 19.769 43.565 0.605 0.7 38.06 ? C6 A0S 402 A 1 HETATM 4 N N1 A0S . . . C 3 19.928 42.309 1.355 0.7 36.97 ? N1 A0S 402 A 1 HETATM 5 C C7 A0S . . . C 3 18.812 41.565 1.473 0.7 39.53 ? C7 A0S 402 A 1 HETATM 6 C C8 A0S . . . C 3 18.737 40.412 2.4 0.7 43.44 ? C8 A0S 402 A 1 HETATM 7 C C9 A0S . . . C 3 19.428 40.055 3.511 0.7 44.21 ? C9 A0S 402 A 1 HETATM 8 C C10 A0S . . . C 3 18.82 38.904 4.021 0.7 47.74 ? C10 A0S 402 A 1 HETATM 9 C C11 A0S . . . C 3 17.787 38.608 3.209 0.7 50.68 ? C11 A0S 402 A 1 HETATM 10 C C12 A0S . . . C 3 21.28 41.745 1.502 0.7 38.8 ? C12 A0S 402 A 1 HETATM 11 C C13 A0S . . . C 3 22.028 42.293 2.719 0.7 35.85 ? C13 A0S 402 A 1 HETATM 12 C C14 A0S . . . C 3 21.344 42.971 3.728 0.7 36.45 ? C14 A0S 402 A 1 HETATM 13 C C15 A0S . . . C 3 21.997 43.438 4.854 0.7 33.98 ? C15 A0S 402 A 1 HETATM 14 F F A0S . . . C 3 23.977 43.621 6.094 0.7 39.45 ? F A0S 402 A 1 HETATM 15 C C16 A0S . . . C 3 23.339 43.215 4.96 0.7 36.46 ? C16 A0S 402 A 1 HETATM 16 C C17 A0S . . . C 3 24.065 42.562 3.994 0.7 37.33 ? C17 A0S 402 A 1 HETATM 17 C C18 A0S . . . C 3 23.397 42.103 2.871 0.7 37.5 ? C18 A0S 402 A 1 HETATM 18 C C19 A0S . . . C 3 22.064 41.787 0.202 0.7 38.76 ? C19 A0S 402 A 1 HETATM 19 C C3 A0S . . . C 3 23.135 43.094 -1.523 0.7 39.6 ? C3 A0S 402 A 1 HETATM 20 C C2 A0S . . . C 3 23.448 41.929 -2.204 0.7 40.83 ? C2 A0S 402 A 1 HETATM 21 C C20 A0S . . . C 3 22.399 40.632 -0.506 0.7 41.36 ? C20 A0S 402 A 1 HETATM 22 C C1 A0S . . . C 3 23.087 40.681 -1.712 0.7 40.01 ? C1 A0S 402 A 1 HETATM 23 C C A0S . . . C 3 23.438 39.414 -2.459 0.7 37.96 ? C A0S 402 A 1 HETATM 24 O O A0S . . . C 3 20.805 45.445 1.757 0.7 37.82 ? O A0S 402 A 1 HETATM 25 N N A0S . . . C 3 22.074 44.232 0.342 0.7 37.84 ? N A0S 402 A 1 HETATM 26 O O1 A0S . . . C 3 17.8 41.839 0.835 0.7 36.12 ? O1 A0S 402 A 1 HETATM 27 O O2 A0S . . . C 3 17.713 39.51 2.175 0.7 48.28 ? O2 A0S 402 A 1 HETATM 28 BR BR A0S . . . C 3 16.521 37.24 3.428 0.7 71.21 ? BR A0S 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 28 #