data_5WE8 # _model_server_result.job_id HmdiAy0ouUIIf1M1_oL2pw _model_server_result.datetime_utc '2024-10-19 17:26:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5we8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 5WE8 # _exptl.entry_id 5WE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.28 _cell.angle_gamma 90 _cell.entry_id 5WE8 _cell.length_a 83.102 _cell.length_b 105.235 _cell.length_c 70.105 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 150 A ASN 354 1_555 C MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc2 A OD2 ASP 164 A ASP 368 1_555 C MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc3 C MN MN . A MN 501 1_555 D O1G ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc4 C MN MN . A MN 501 1_555 D O1A ANP . A ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc5 C MN MN . A MN 501 1_555 I O HOH . A HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc6 C MN MN . A MN 501 1_555 I O HOH . A HOH 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc7 B OD1 ASN 150 B ASN 354 1_555 F MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc8 B OD2 ASP 164 B ASP 368 1_555 F MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc9 F MN MN . B MN 501 1_555 G O2A ANP . B ANP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc10 F MN MN . B MN 501 1_555 J O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc11 F MN MN . B MN 501 1_555 J O HOH . B HOH 660 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WE8 _atom_sites.fract_transf_matrix[1][1] 0.012033 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006205 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016049 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 501 902 MN MN . D 3 ANP A 1 502 901 ANP ANP . E 4 A7Y A 1 503 900 A7Y LI1 . F 2 MN B 1 501 902 MN MN . G 3 ANP B 1 502 901 ANP ANP . H 4 A7Y B 1 503 900 A7Y LI1 . I 5 HOH A 1 601 145 HOH HOH . I 5 HOH A 2 602 260 HOH HOH . I 5 HOH A 3 603 208 HOH HOH . I 5 HOH A 4 604 176 HOH HOH . I 5 HOH A 5 605 140 HOH HOH . I 5 HOH A 6 606 195 HOH HOH . I 5 HOH A 7 607 134 HOH HOH . I 5 HOH A 8 608 56 HOH HOH . I 5 HOH A 9 609 132 HOH HOH . I 5 HOH A 10 610 269 HOH HOH . I 5 HOH A 11 611 50 HOH HOH . I 5 HOH A 12 612 204 HOH HOH . I 5 HOH A 13 613 197 HOH HOH . I 5 HOH A 14 614 227 HOH HOH . I 5 HOH A 15 615 106 HOH HOH . I 5 HOH A 16 616 136 HOH HOH . I 5 HOH A 17 617 1 HOH HOH . I 5 HOH A 18 618 22 HOH HOH . I 5 HOH A 19 619 172 HOH HOH . I 5 HOH A 20 620 2 HOH HOH . I 5 HOH A 21 621 235 HOH HOH . I 5 HOH A 22 622 16 HOH HOH . I 5 HOH A 23 623 105 HOH HOH . I 5 HOH A 24 624 65 HOH HOH . I 5 HOH A 25 625 52 HOH HOH . I 5 HOH A 26 626 79 HOH HOH . I 5 HOH A 27 627 167 HOH HOH . I 5 HOH A 28 628 128 HOH HOH . I 5 HOH A 29 629 240 HOH HOH . I 5 HOH A 30 630 55 HOH HOH . I 5 HOH A 31 631 43 HOH HOH . I 5 HOH A 32 632 9 HOH HOH . I 5 HOH A 33 633 121 HOH HOH . I 5 HOH A 34 634 265 HOH HOH . I 5 HOH A 35 635 254 HOH HOH . I 5 HOH A 36 636 5 HOH HOH . I 5 HOH A 37 637 175 HOH HOH . I 5 HOH A 38 638 228 HOH HOH . I 5 HOH A 39 639 123 HOH HOH . I 5 HOH A 40 640 20 HOH HOH . I 5 HOH A 41 641 219 HOH HOH . I 5 HOH A 42 642 158 HOH HOH . I 5 HOH A 43 643 10 HOH HOH . I 5 HOH A 44 644 223 HOH HOH . I 5 HOH A 45 645 80 HOH HOH . I 5 HOH A 46 646 246 HOH HOH . I 5 HOH A 47 647 162 HOH HOH . I 5 HOH A 48 648 59 HOH HOH . I 5 HOH A 49 649 96 HOH HOH . I 5 HOH A 50 650 182 HOH HOH . I 5 HOH A 51 651 213 HOH HOH . I 5 HOH A 52 652 258 HOH HOH . I 5 HOH A 53 653 207 HOH HOH . I 5 HOH A 54 654 169 HOH HOH . I 5 HOH A 55 655 81 HOH HOH . I 5 HOH A 56 656 156 HOH HOH . I 5 HOH A 57 657 94 HOH HOH . I 5 HOH A 58 658 143 HOH HOH . I 5 HOH A 59 659 13 HOH HOH . I 5 HOH A 60 660 86 HOH HOH . I 5 HOH A 61 661 41 HOH HOH . I 5 HOH A 62 662 11 HOH HOH . I 5 HOH A 63 663 239 HOH HOH . I 5 HOH A 64 664 98 HOH HOH . I 5 HOH A 65 665 109 HOH HOH . I 5 HOH A 66 666 30 HOH HOH . I 5 HOH A 67 667 74 HOH HOH . I 5 HOH A 68 668 60 HOH HOH . I 5 HOH A 69 669 61 HOH HOH . I 5 HOH A 70 670 192 HOH HOH . I 5 HOH A 71 671 48 HOH HOH . I 5 HOH A 72 672 89 HOH HOH . I 5 HOH A 73 673 15 HOH HOH . I 5 HOH A 74 674 222 HOH HOH . I 5 HOH A 75 675 107 HOH HOH . I 5 HOH A 76 676 72 HOH HOH . I 5 HOH A 77 677 78 HOH HOH . I 5 HOH A 78 678 117 HOH HOH . I 5 HOH A 79 679 163 HOH HOH . I 5 HOH A 80 680 33 HOH HOH . I 5 HOH A 81 681 187 HOH HOH . I 5 HOH A 82 682 103 HOH HOH . I 5 HOH A 83 683 76 HOH HOH . I 5 HOH A 84 684 245 HOH HOH . I 5 HOH A 85 685 177 HOH HOH . I 5 HOH A 86 686 21 HOH HOH . I 5 HOH A 87 687 171 HOH HOH . I 5 HOH A 88 688 146 HOH HOH . I 5 HOH A 89 689 85 HOH HOH . I 5 HOH A 90 690 130 HOH HOH . I 5 HOH A 91 691 127 HOH HOH . I 5 HOH A 92 692 241 HOH HOH . I 5 HOH A 93 693 92 HOH HOH . I 5 HOH A 94 694 155 HOH HOH . I 5 HOH A 95 695 26 HOH HOH . I 5 HOH A 96 696 46 HOH HOH . I 5 HOH A 97 697 4 HOH HOH . I 5 HOH A 98 698 160 HOH HOH . I 5 HOH A 99 699 152 HOH HOH . I 5 HOH A 100 700 210 HOH HOH . I 5 HOH A 101 701 29 HOH HOH . I 5 HOH A 102 702 54 HOH HOH . I 5 HOH A 103 703 73 HOH HOH . I 5 HOH A 104 704 75 HOH HOH . I 5 HOH A 105 705 165 HOH HOH . I 5 HOH A 106 706 261 HOH HOH . I 5 HOH A 107 707 202 HOH HOH . I 5 HOH A 108 708 62 HOH HOH . I 5 HOH A 109 709 93 HOH HOH . I 5 HOH A 110 710 118 HOH HOH . I 5 HOH A 111 711 58 HOH HOH . I 5 HOH A 112 712 38 HOH HOH . I 5 HOH A 113 713 82 HOH HOH . I 5 HOH A 114 714 190 HOH HOH . I 5 HOH A 115 715 193 HOH HOH . I 5 HOH A 116 716 180 HOH HOH . I 5 HOH A 117 717 67 HOH HOH . I 5 HOH A 118 718 248 HOH HOH . I 5 HOH A 119 719 151 HOH HOH . I 5 HOH A 120 720 53 HOH HOH . I 5 HOH A 121 721 249 HOH HOH . I 5 HOH A 122 722 253 HOH HOH . I 5 HOH A 123 723 147 HOH HOH . I 5 HOH A 124 724 110 HOH HOH . I 5 HOH A 125 725 216 HOH HOH . I 5 HOH A 126 726 244 HOH HOH . J 5 HOH B 1 601 113 HOH HOH . J 5 HOH B 2 602 179 HOH HOH . J 5 HOH B 3 603 234 HOH HOH . J 5 HOH B 4 604 39 HOH HOH . J 5 HOH B 5 605 49 HOH HOH . J 5 HOH B 6 606 25 HOH HOH . J 5 HOH B 7 607 149 HOH HOH . J 5 HOH B 8 608 12 HOH HOH . J 5 HOH B 9 609 166 HOH HOH . J 5 HOH B 10 610 225 HOH HOH . J 5 HOH B 11 611 91 HOH HOH . J 5 HOH B 12 612 69 HOH HOH . J 5 HOH B 13 613 122 HOH HOH . J 5 HOH B 14 614 116 HOH HOH . J 5 HOH B 15 615 112 HOH HOH . J 5 HOH B 16 616 256 HOH HOH . J 5 HOH B 17 617 97 HOH HOH . J 5 HOH B 18 618 8 HOH HOH . J 5 HOH B 19 619 95 HOH HOH . J 5 HOH B 20 620 243 HOH HOH . J 5 HOH B 21 621 153 HOH HOH . J 5 HOH B 22 622 252 HOH HOH . J 5 HOH B 23 623 188 HOH HOH . J 5 HOH B 24 624 34 HOH HOH . J 5 HOH B 25 625 100 HOH HOH . J 5 HOH B 26 626 242 HOH HOH . J 5 HOH B 27 627 263 HOH HOH . J 5 HOH B 28 628 125 HOH HOH . J 5 HOH B 29 629 183 HOH HOH . J 5 HOH B 30 630 189 HOH HOH . J 5 HOH B 31 631 214 HOH HOH . J 5 HOH B 32 632 262 HOH HOH . J 5 HOH B 33 633 17 HOH HOH . J 5 HOH B 34 634 6 HOH HOH . J 5 HOH B 35 635 63 HOH HOH . J 5 HOH B 36 636 232 HOH HOH . J 5 HOH B 37 637 7 HOH HOH . J 5 HOH B 38 638 139 HOH HOH . J 5 HOH B 39 639 44 HOH HOH . J 5 HOH B 40 640 186 HOH HOH . J 5 HOH B 41 641 233 HOH HOH . J 5 HOH B 42 642 174 HOH HOH . J 5 HOH B 43 643 267 HOH HOH . J 5 HOH B 44 644 42 HOH HOH . J 5 HOH B 45 645 133 HOH HOH . J 5 HOH B 46 646 51 HOH HOH . J 5 HOH B 47 647 231 HOH HOH . J 5 HOH B 48 648 70 HOH HOH . J 5 HOH B 49 649 129 HOH HOH . J 5 HOH B 50 650 170 HOH HOH . J 5 HOH B 51 651 236 HOH HOH . J 5 HOH B 52 652 35 HOH HOH . J 5 HOH B 53 653 47 HOH HOH . J 5 HOH B 54 654 238 HOH HOH . J 5 HOH B 55 655 104 HOH HOH . J 5 HOH B 56 656 138 HOH HOH . J 5 HOH B 57 657 36 HOH HOH . J 5 HOH B 58 658 108 HOH HOH . J 5 HOH B 59 659 220 HOH HOH . J 5 HOH B 60 660 203 HOH HOH . J 5 HOH B 61 661 185 HOH HOH . J 5 HOH B 62 662 88 HOH HOH . J 5 HOH B 63 663 161 HOH HOH . J 5 HOH B 64 664 111 HOH HOH . J 5 HOH B 65 665 221 HOH HOH . J 5 HOH B 66 666 87 HOH HOH . J 5 HOH B 67 667 194 HOH HOH . J 5 HOH B 68 668 114 HOH HOH . J 5 HOH B 69 669 68 HOH HOH . J 5 HOH B 70 670 57 HOH HOH . J 5 HOH B 71 671 71 HOH HOH . J 5 HOH B 72 672 28 HOH HOH . J 5 HOH B 73 673 196 HOH HOH . J 5 HOH B 74 674 66 HOH HOH . J 5 HOH B 75 675 168 HOH HOH . J 5 HOH B 76 676 120 HOH HOH . J 5 HOH B 77 677 212 HOH HOH . J 5 HOH B 78 678 131 HOH HOH . J 5 HOH B 79 679 23 HOH HOH . J 5 HOH B 80 680 135 HOH HOH . J 5 HOH B 81 681 148 HOH HOH . J 5 HOH B 82 682 3 HOH HOH . J 5 HOH B 83 683 40 HOH HOH . J 5 HOH B 84 684 101 HOH HOH . J 5 HOH B 85 685 230 HOH HOH . J 5 HOH B 86 686 224 HOH HOH . J 5 HOH B 87 687 18 HOH HOH . J 5 HOH B 88 688 99 HOH HOH . J 5 HOH B 89 689 27 HOH HOH . J 5 HOH B 90 690 200 HOH HOH . J 5 HOH B 91 691 154 HOH HOH . J 5 HOH B 92 692 137 HOH HOH . J 5 HOH B 93 693 144 HOH HOH . J 5 HOH B 94 694 19 HOH HOH . J 5 HOH B 95 695 102 HOH HOH . J 5 HOH B 96 696 229 HOH HOH . J 5 HOH B 97 697 37 HOH HOH . J 5 HOH B 98 698 77 HOH HOH . J 5 HOH B 99 699 209 HOH HOH . J 5 HOH B 100 700 198 HOH HOH . J 5 HOH B 101 701 45 HOH HOH . J 5 HOH B 102 702 257 HOH HOH . J 5 HOH B 103 703 184 HOH HOH . J 5 HOH B 104 704 159 HOH HOH . J 5 HOH B 105 705 14 HOH HOH . J 5 HOH B 106 706 124 HOH HOH . J 5 HOH B 107 707 119 HOH HOH . J 5 HOH B 108 708 24 HOH HOH . J 5 HOH B 109 709 206 HOH HOH . J 5 HOH B 110 710 90 HOH HOH . J 5 HOH B 111 711 141 HOH HOH . J 5 HOH B 112 712 181 HOH HOH . J 5 HOH B 113 713 266 HOH HOH . J 5 HOH B 114 714 64 HOH HOH . J 5 HOH B 115 715 32 HOH HOH . J 5 HOH B 116 716 201 HOH HOH . J 5 HOH B 117 717 115 HOH HOH . J 5 HOH B 118 718 205 HOH HOH . J 5 HOH B 119 719 199 HOH HOH . J 5 HOH B 120 720 191 HOH HOH . J 5 HOH B 121 721 251 HOH HOH . J 5 HOH B 122 722 218 HOH HOH . J 5 HOH B 123 723 250 HOH HOH . J 5 HOH B 124 724 247 HOH HOH . J 5 HOH B 125 725 237 HOH HOH . J 5 HOH B 126 726 178 HOH HOH . J 5 HOH B 127 727 157 HOH HOH . J 5 HOH B 128 728 215 HOH HOH . J 5 HOH B 129 729 83 HOH HOH . J 5 HOH B 130 730 226 HOH HOH . J 5 HOH B 131 731 173 HOH HOH . J 5 HOH B 132 732 126 HOH HOH . J 5 HOH B 133 733 211 HOH HOH . J 5 HOH B 134 734 164 HOH HOH . J 5 HOH B 135 735 142 HOH HOH . J 5 HOH B 136 736 84 HOH HOH . J 5 HOH B 137 737 217 HOH HOH . J 5 HOH B 138 738 255 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 54.695 _atom_site.Cartn_y 2.463 _atom_site.Cartn_z 19.933 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 209 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #