data_5WEB # _model_server_result.job_id YoqAKZ17JJo4NzpZ5VLMjA _model_server_result.datetime_utc '2024-11-24 21:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5web # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 5WEB # _exptl.entry_id 5WEB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WEB _cell.length_a 90.793 _cell.length_b 90.793 _cell.length_c 135.062 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 61 A HIS 41 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc2 A OE1 GLU 81 A GLU 80 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 A OD2 ASP 109 A ASP 108 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc4 A OD1 ASP 109 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc5 A OE2 GLU 120 A GLU 119 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc6 A O ILE 121 A ILE 120 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc7 B MN MN . A MN 201 1_555 D O2 KU5 . A KU5 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.35 ? metalc ? metalc8 B MN MN . A MN 201 1_555 D O2 KU5 . A KU5 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.281 ? metalc ? metalc9 B MN MN . A MN 201 1_555 D O1 KU5 . A KU5 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.196 ? metalc ? metalc10 B MN MN . A MN 201 1_555 D O1 KU5 . A KU5 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.122 ? metalc ? metalc11 C MN MN . A MN 202 1_555 D O3 KU5 . A KU5 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.184 ? metalc ? metalc12 C MN MN . A MN 202 1_555 D O3 KU5 . A KU5 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.208 ? metalc ? metalc13 C MN MN . A MN 202 1_555 D O2 KU5 . A KU5 203 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.158 ? metalc ? metalc14 C MN MN . A MN 202 1_555 D O2 KU5 . A KU5 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.2 ? metalc ? metalc15 C MN MN . A MN 202 1_555 G O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc16 C MN MN . A MN 202 1_555 G O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 356 n n S O2 SO4 doub 357 n n S O3 SO4 sing 358 n n S O4 SO4 sing 359 n n # _atom_sites.entry_id 5WEB _atom_sites.fract_transf_matrix[1][1] 0.011014 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 201 1 MN MN . C 2 MN A 1 202 2 MN MN . D 3 KU5 A 1 203 1 KU5 KU5 . E 4 SO4 A 1 204 1 SO4 SO4 . F 4 SO4 A 1 205 2 SO4 SO4 . G 5 HOH A 1 301 12 HOH HOH . G 5 HOH A 2 302 1 HOH HOH . G 5 HOH A 3 303 2 HOH HOH . G 5 HOH A 4 304 17 HOH HOH . G 5 HOH A 5 305 7 HOH HOH . G 5 HOH A 6 306 3 HOH HOH . G 5 HOH A 7 307 13 HOH HOH . G 5 HOH A 8 308 15 HOH HOH . G 5 HOH A 9 309 8 HOH HOH . G 5 HOH A 10 310 16 HOH HOH . G 5 HOH A 11 311 6 HOH HOH . G 5 HOH A 12 312 18 HOH HOH . G 5 HOH A 13 313 10 HOH HOH . G 5 HOH A 14 314 11 HOH HOH . G 5 HOH A 15 315 14 HOH HOH . G 5 HOH A 16 316 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 216.944 -317.248 705.674 0.76 125.9 ? S SO4 205 A 1 HETATM 2 O O1 SO4 . . . F 4 218.065 -317.215 704.74 0.76 125.04 ? O1 SO4 205 A 1 HETATM 3 O O2 SO4 . . . F 4 215.69 -317.281 704.931 0.76 122.37 ? O2 SO4 205 A 1 HETATM 4 O O3 SO4 . . . F 4 217.047 -318.441 706.511 0.76 127.16 ? O3 SO4 205 A 1 HETATM 5 O O4 SO4 . . . F 4 216.971 -316.05 706.505 0.76 129.38 ? O4 SO4 205 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #