data_5WEH # _model_server_result.job_id sdQmMXwOGOLn3BJZiXHeJQ _model_server_result.datetime_utc '2024-11-23 12:33:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5weh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":303}' # _entry.id 5WEH # _exptl.entry_id 5WEH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-ALPHA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5WEH _cell.length_a 339.221 _cell.length_b 339.221 _cell.length_c 89.199 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WEH _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I,J,K,L,M,N,O,Y,Z,AA,BA,CA,DA,KA 1 1 B,F,G,H,P,Q,R,S,T,U,V,W,X,EA,FA,GA,HA,IA,JA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 P N N ? 10 X N N ? 10 CA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 64 A CYS 64 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 64 G CYS 64 1_555 B SG CYS 88 G CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A O GLU 54 A GLU 54 1_555 M CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 A O ALA 57 A ALA 57 1_555 M CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc3 A O GLY 59 A GLY 59 1_555 M CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc4 A OE1 GLN 61 A GLN 61 1_555 M CA CA . A CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.168 ? metalc ? metalc5 A NE2 HIS 102 A HIS 102 1_555 I FE HEA . A HEA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc6 A ND1 HIS 284 A HIS 284 1_555 K CU CU1 . A CU1 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc7 A NE2 HIS 333 A HIS 333 1_555 K CU CU1 . A CU1 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc8 A NE2 HIS 334 A HIS 334 1_555 K CU CU1 . A CU1 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc9 A OD2 ASP 412 A ASP 412 1_555 L MG MG . A MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc10 A NE2 HIS 419 A HIS 419 1_555 J FE HEA . A HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc11 A NE2 HIS 421 A HIS 421 1_555 I FE HEA . A HEA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc12 L MG MG . A MG 604 1_555 C OE1 GLU 229 B GLU 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc13 B O GLU 54 G GLU 54 1_555 U CA CA . G CA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc14 B O ALA 57 G ALA 57 1_555 U CA CA . G CA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc15 B O GLY 59 G GLY 59 1_555 U CA CA . G CA 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc16 B NE2 HIS 102 G HIS 102 1_555 Q FE HEA . G HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc17 B ND1 HIS 284 G HIS 284 1_555 S CU CU1 . G CU1 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc18 B NE2 HIS 333 G HIS 333 1_555 S CU CU1 . G CU1 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc19 B OD2 ASP 412 G ASP 412 1_555 T MG MG . G MG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc20 B NE2 HIS 419 G HIS 419 1_555 R FE HEA . G HEA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc21 B NE2 HIS 421 G HIS 421 1_555 Q FE HEA . G HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc22 T MG MG . G MG 605 1_555 F OE1 GLU 229 H GLU 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc23 C ND1 HIS 192 B HIS 217 1_555 Z CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc24 C O GLU 229 B GLU 254 1_555 Y CU CU1 . B CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc25 C SG CYS 231 B CYS 256 1_555 Z CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc26 C ND1 HIS 235 B HIS 260 1_555 Y CU CU1 . B CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc27 C SD MET 238 B MET 263 1_555 Z CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc28 Y CU CU1 . B CU1 301 1_555 Z CU CU1 . B CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc29 F ND1 HIS 192 H HIS 217 1_555 EA CU CU1 . H CU1 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc30 EA CU CU1 . H CU1 301 1_555 FA CU CU1 . H CU1 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMU _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-ALPHA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMU sing 449 n n C1B O1B LMU sing 450 n n C1B O5B LMU sing 451 n n C1B H1B LMU sing 452 n n C2B C3B LMU sing 453 n n C2B O2B LMU sing 454 n n C2B H2B LMU sing 455 n n C3B C4B LMU sing 456 n n C3B O3B LMU sing 457 n n C3B H3B LMU sing 458 n n C4B C5B LMU sing 459 n n C4B O4' LMU sing 460 n n C4B H4B LMU sing 461 n n C5B C6B LMU sing 462 n n C5B O5B LMU sing 463 n n C5B H5B LMU sing 464 n n C6B O6B LMU sing 465 n n C6B "H6'2" LMU sing 466 n n C6B "H6'1" LMU sing 467 n n O1B C4' LMU sing 468 n n O2B H2O1 LMU sing 469 n n O3B H3O1 LMU sing 470 n n O4' H4O1 LMU sing 471 n n O6B H6B LMU sing 472 n n C1' C2' LMU sing 473 n n C1' O1' LMU sing 474 n n C1' O5' LMU sing 475 n n C1' H1' LMU sing 476 n n C2' C3' LMU sing 477 n n C2' O2' LMU sing 478 n n C2' H2' LMU sing 479 n n C3' C4' LMU sing 480 n n C3' O3' LMU sing 481 n n C3' H3' LMU sing 482 n n C4' C5' LMU sing 483 n n C4' H4' LMU sing 484 n n C5' C6' LMU sing 485 n n C5' O5' LMU sing 486 n n C5' H5' LMU sing 487 n n C6' O6' LMU sing 488 n n C6' H6D LMU sing 489 n n C6' H6E LMU sing 490 n n O1' C1 LMU sing 491 n n O2' H2O2 LMU sing 492 n n O3' H3O2 LMU sing 493 n n O6' H6' LMU sing 494 n n C1 C2 LMU sing 495 n n C1 H12 LMU sing 496 n n C1 H11 LMU sing 497 n n C2 C3 LMU sing 498 n n C2 H22 LMU sing 499 n n C2 H21 LMU sing 500 n n C3 C4 LMU sing 501 n n C3 H32 LMU sing 502 n n C3 H31 LMU sing 503 n n C4 C5 LMU sing 504 n n C4 H42 LMU sing 505 n n C4 H41 LMU sing 506 n n C5 C6 LMU sing 507 n n C5 H52 LMU sing 508 n n C5 H51 LMU sing 509 n n C6 C7 LMU sing 510 n n C6 H62 LMU sing 511 n n C6 H61 LMU sing 512 n n C7 C8 LMU sing 513 n n C7 H72 LMU sing 514 n n C7 H71 LMU sing 515 n n C8 C9 LMU sing 516 n n C8 H82 LMU sing 517 n n C8 H81 LMU sing 518 n n C9 C10 LMU sing 519 n n C9 H92 LMU sing 520 n n C9 H91 LMU sing 521 n n C10 C11 LMU sing 522 n n C10 H102 LMU sing 523 n n C10 H101 LMU sing 524 n n C11 C12 LMU sing 525 n n C11 H112 LMU sing 526 n n C11 H111 LMU sing 527 n n C12 H123 LMU sing 528 n n C12 H122 LMU sing 529 n n C12 H121 LMU sing 530 n n # _atom_sites.entry_id 5WEH _atom_sites.fract_transf_matrix[1][1] 0.002948 _atom_sites.fract_transf_matrix[1][2] 0.001702 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003404 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 HEA A 1 601 567 HEA HEA . J 5 HEA A 1 602 568 HEA HEA . K 6 CU1 A 1 603 603 CU1 CU1 . L 7 MG A 1 604 604 MG MG . M 8 CA A 1 605 605 CA CA . N 9 3PE A 1 606 606 3PE 3PE . O 9 3PE A 1 607 607 3PE 3PE . P 10 LMU G 1 601 608 LMU LMU . Q 5 HEA G 1 602 567 HEA HEA . R 5 HEA G 1 603 568 HEA HEA . S 6 CU1 G 1 604 603 CU1 CU1 . T 7 MG G 1 605 604 MG MG . U 8 CA G 1 606 605 CA CA . V 9 3PE G 1 607 606 3PE 3PE . W 9 3PE G 1 608 607 3PE 3PE . X 10 LMU G 1 609 608 LMU LMU . Y 6 CU1 B 1 301 301 CU1 CU1 . Z 6 CU1 B 1 302 302 CU1 CU1 . AA 9 3PE C 1 301 301 3PE 3PE . BA 9 3PE C 1 302 302 3PE 3PE . CA 10 LMU C 1 303 303 LMU LMU . DA 9 3PE D 1 101 101 3PE 3PE . EA 6 CU1 H 1 301 301 CU1 CU1 . FA 6 CU1 H 1 302 302 CU1 CU1 . GA 9 3PE I 1 301 301 3PE 3PE . HA 9 3PE I 1 302 302 3PE 3PE . IA 9 3PE I 1 303 303 3PE 3PE . JA 9 3PE J 1 101 304 3PE 3PE . KA 11 HOH A 1 701 701 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMU . . . CA 10 -7.508 144.261 -16.89 1 181.33 ? C1B LMU 303 C 1 HETATM 2 C C2B LMU . . . CA 10 -7.449 142.841 -16.366 1 204.23 ? C2B LMU 303 C 1 HETATM 3 C C3B LMU . . . CA 10 -6.999 142.818 -14.947 1 203.47 ? C3B LMU 303 C 1 HETATM 4 C C4B LMU . . . CA 10 -5.76 143.627 -14.651 1 187.73 ? C4B LMU 303 C 1 HETATM 5 C C5B LMU . . . CA 10 -5.354 144.709 -15.672 1 176.48 ? C5B LMU 303 C 1 HETATM 6 C C6B LMU . . . CA 10 -3.898 144.512 -15.975 1 164.81 ? C6B LMU 303 C 1 HETATM 7 O O1B LMU . . . CA 10 -8.206 145.041 -16.009 1 161.46 ? O1B LMU 303 C 1 HETATM 8 O O2B LMU . . . CA 10 -8.748 142.228 -16.47 1 214.55 ? O2B LMU 303 C 1 HETATM 9 O O3B LMU . . . CA 10 -6.749 141.44 -14.562 1 198.97 ? O3B LMU 303 C 1 HETATM 10 O O4' LMU . . . CA 10 -5.938 144.271 -13.382 1 169.85 ? O4' LMU 303 C 1 HETATM 11 O O5B LMU . . . CA 10 -6.099 144.773 -16.953 1 182.23 ? O5B LMU 303 C 1 HETATM 12 O O6B LMU . . . CA 10 -3.137 144.999 -14.904 1 156.18 ? O6B LMU 303 C 1 HETATM 13 C C1' LMU . . . CA 10 -11.524 147.324 -17.209 1 148.66 ? C1' LMU 303 C 1 HETATM 14 C C2' LMU . . . CA 10 -10.109 147.789 -17.571 1 151.46 ? C2' LMU 303 C 1 HETATM 15 C C3' LMU . . . CA 10 -9.148 146.654 -17.712 1 157.28 ? C3' LMU 303 C 1 HETATM 16 C C4' LMU . . . CA 10 -9.339 145.807 -16.484 1 161.28 ? C4' LMU 303 C 1 HETATM 17 C C5' LMU . . . CA 10 -10.614 144.985 -16.687 1 162.89 ? C5' LMU 303 C 1 HETATM 18 C C6' LMU . . . CA 10 -11.052 144.399 -15.377 1 159.92 ? C6' LMU 303 C 1 HETATM 19 O O1' LMU . . . CA 10 -12.449 147.953 -18.021 1 153.82 ? O1' LMU 303 C 1 HETATM 20 O O2' LMU . . . CA 10 -10.135 148.581 -18.773 1 150.9 ? O2' LMU 303 C 1 HETATM 21 O O3' LMU . . . CA 10 -7.796 147.162 -17.857 1 138.16 ? O3' LMU 303 C 1 HETATM 22 O O5' LMU . . . CA 10 -11.709 145.815 -17.263 1 150.14 ? O5' LMU 303 C 1 HETATM 23 O O6' LMU . . . CA 10 -11.667 145.38 -14.596 1 144.43 ? O6' LMU 303 C 1 HETATM 24 C C1 LMU . . . CA 10 -13.093 149.107 -17.451 1 130.26 ? C1 LMU 303 C 1 HETATM 25 C C2 LMU . . . CA 10 -14.224 149.655 -18.366 1 115.51 ? C2 LMU 303 C 1 HETATM 26 C C3 LMU . . . CA 10 -14.447 151.181 -18.118 1 111.9 ? C3 LMU 303 C 1 HETATM 27 C C4 LMU . . . CA 10 -15.962 151.53 -18.18 1 115.43 ? C4 LMU 303 C 1 HETATM 28 C C5 LMU . . . CA 10 -16.203 153.071 -18.155 1 108.22 ? C5 LMU 303 C 1 HETATM 29 C C6 LMU . . . CA 10 -17.721 153.343 -17.901 1 118.57 ? C6 LMU 303 C 1 HETATM 30 C C7 LMU . . . CA 10 -18.02 154.864 -17.881 1 109.13 ? C7 LMU 303 C 1 HETATM 31 C C8 LMU . . . CA 10 -19.452 155.144 -17.383 1 112.54 ? C8 LMU 303 C 1 HETATM 32 C C9 LMU . . . CA 10 -20.02 156.388 -18.089 1 115.7 ? C9 LMU 303 C 1 HETATM 33 C C10 LMU . . . CA 10 -20.679 155.984 -19.409 1 126.13 ? C10 LMU 303 C 1 HETATM 34 C C11 LMU . . . CA 10 -22.204 156.113 -19.297 1 125.5 ? C11 LMU 303 C 1 HETATM 35 C C12 LMU . . . CA 10 -22.897 155.338 -20.436 1 109.96 ? C12 LMU 303 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #