data_5WEP # _model_server_result.job_id mJHPYlTvMyes3_2AvuUfbQ _model_server_result.datetime_utc '2025-02-15 13:45:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wep # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5WEP # _exptl.entry_id 5WEP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 537.082 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "6,6'-(4-nitro-1H-pyrazole-3,5-diyl)bis(3-bromopyrazolo[1,5-a]pyrimidin-2(1H)-one)" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WEP _cell.length_a 73.181 _cell.length_b 73.181 _cell.length_c 123.818 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WEP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 7 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 A NE2 HIS 67 A HIS 67 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc3 A OE1 GLU 113 A GLU 113 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc4 C O28 A81 . A A81 201 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc5 D ZN ZN . A ZN 202 1_555 E O17 A81 . B A81 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 B NE2 HIS 67 B HIS 67 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc7 B OE1 GLU 113 B GLU 113 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? # _chem_comp.formula 'C15 H7 Br2 N9 O4' _chem_comp.formula_weight 537.082 _chem_comp.id A81 _chem_comp.mon_nstd_flag . _chem_comp.name "6,6'-(4-nitro-1H-pyrazole-3,5-diyl)bis(3-bromopyrazolo[1,5-a]pyrimidin-2(1H)-one)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 C27 A81 doub 1 n n BR C29 A81 sing 2 n n C27 C29 A81 sing 3 n n C27 N26 A81 sing 4 n n C29 C23 A81 doub 5 n n N26 N24 A81 sing 6 n n C23 N24 A81 sing 7 n n C23 N22 A81 sing 8 n n N24 C25 A81 sing 9 n n N22 C21 A81 doub 10 n n C25 C20 A81 doub 11 n n N06 C05 A81 sing 12 n y N06 N07 A81 sing 13 n y C21 C20 A81 sing 14 n n C20 C05 A81 sing 15 n n C05 C04 A81 doub 16 n y N07 C08 A81 doub 17 n y C04 C08 A81 sing 18 n y C04 N02 A81 sing 19 n n C08 C09 A81 sing 20 n n N02 O03 A81 doub 21 n n N02 O01 A81 sing 22 n n C09 C10 A81 sing 23 n n C09 C14 A81 doub 24 n n C10 N11 A81 doub 25 n n C14 N13 A81 sing 26 n n N11 C12 A81 sing 27 n n N13 C12 A81 sing 28 n n N13 N15 A81 sing 29 n n C12 C18 A81 doub 30 n n N15 C16 A81 sing 31 n n C18 C16 A81 sing 32 n n C18 BR2 A81 sing 33 n n C16 O17 A81 doub 34 n n C10 H1 A81 sing 35 n n C21 H2 A81 sing 36 n n N06 H3 A81 sing 37 n n C14 H4 A81 sing 38 n n N15 H5 A81 sing 39 n n C25 H7 A81 sing 40 n n N26 H8 A81 sing 41 n n # _atom_sites.entry_id 5WEP _atom_sites.fract_transf_matrix[1][1] 0.013665 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008076 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A81 A 1 201 1 A81 LIG . D 3 ZN A 1 202 2 ZN ZN . E 2 A81 B 1 201 2 A81 LIG . F 3 ZN B 1 202 1 ZN ZN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A81 . . . E 2 12.346 -14.244 -3.972 1 109.18 ? C10 A81 201 B 1 HETATM 2 C C20 A81 . . . E 2 8.001 -13.701 -7.361 1 125.37 ? C20 A81 201 B 1 HETATM 3 C C21 A81 . . . E 2 8.066 -12.354 -7.733 1 125.14 ? C21 A81 201 B 1 HETATM 4 O O01 A81 . . . E 2 11.502 -12.912 -7.242 1 124.37 -1 O01 A81 201 B 1 HETATM 5 N N02 A81 . . . E 2 11.06 -14.214 -6.969 1 128.3 ? N02 A81 201 B 1 HETATM 6 O O03 A81 . . . E 2 11.569 -15.137 -7.497 1 131.69 ? O03 A81 201 B 1 HETATM 7 C C04 A81 . . . E 2 9.98 -14.407 -6.018 1 122.18 ? C04 A81 201 B 1 HETATM 8 C C05 A81 . . . E 2 8.623 -14.168 -6.203 1 123.98 ? C05 A81 201 B 1 HETATM 9 N N06 A81 . . . E 2 8.018 -14.48 -5.065 1 119.64 ? N06 A81 201 B 1 HETATM 10 N N07 A81 . . . E 2 8.944 -14.905 -4.153 1 113.48 ? N07 A81 201 B 1 HETATM 11 C C08 A81 . . . E 2 10.137 -14.861 -4.719 1 114.58 ? C08 A81 201 B 1 HETATM 12 C C09 A81 . . . E 2 11.353 -15.209 -4.152 1 109.28 ? C09 A81 201 B 1 HETATM 13 N N11 A81 . . . E 2 13.507 -14.594 -3.437 1 103.75 ? N11 A81 201 B 1 HETATM 14 C C12 A81 . . . E 2 13.734 -15.874 -3.07 1 107.95 ? C12 A81 201 B 1 HETATM 15 N N13 A81 . . . E 2 12.837 -16.809 -3.223 1 109.7 ? N13 A81 201 B 1 HETATM 16 C C14 A81 . . . E 2 11.629 -16.517 -3.765 1 110.19 ? C14 A81 201 B 1 HETATM 17 N N15 A81 . . . E 2 13.369 -18.023 -2.75 1 115.61 ? N15 A81 201 B 1 HETATM 18 C C16 A81 . . . E 2 14.598 -17.817 -2.309 1 117.07 ? C16 A81 201 B 1 HETATM 19 O O17 A81 . . . E 2 15.321 -18.636 -1.844 1 111.85 ? O17 A81 201 B 1 HETATM 20 C C18 A81 . . . E 2 14.887 -16.471 -2.485 1 118.97 ? C18 A81 201 B 1 HETATM 21 BR BR2 A81 . . . E 2 16.538 -15.558 -2.028 1 141.64 ? BR2 A81 201 B 1 HETATM 22 N N22 A81 . . . E 2 7.453 -11.952 -8.843 1 128.53 ? N22 A81 201 B 1 HETATM 23 C C23 A81 . . . E 2 6.761 -12.823 -9.626 1 122.64 ? C23 A81 201 B 1 HETATM 24 N N24 A81 . . . E 2 6.671 -14.085 -9.319 1 124.31 ? N24 A81 201 B 1 HETATM 25 C C25 A81 . . . E 2 7.278 -14.554 -8.192 1 128.56 ? C25 A81 201 B 1 HETATM 26 N N26 A81 . . . E 2 5.903 -14.738 -10.3 1 129.92 ? N26 A81 201 B 1 HETATM 27 C C27 A81 . . . E 2 5.523 -13.854 -11.213 1 123.69 ? C27 A81 201 B 1 HETATM 28 O O28 A81 . . . E 2 4.863 -14.085 -12.172 1 114.16 ? O28 A81 201 B 1 HETATM 29 C C29 A81 . . . E 2 6.037 -12.613 -10.844 1 121.83 ? C29 A81 201 B 1 HETATM 30 BR BR A81 . . . E 2 5.808 -10.936 -11.803 1 120.76 ? BR A81 201 B 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 30 #