data_5WFJ # _model_server_result.job_id CCCzZwgBYEagJlAxijwjkQ _model_server_result.datetime_utc '2024-11-22 05:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wfj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":4000}' # _entry.id 5WFJ # _exptl.entry_id 5WFJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.376 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-({[3-(propanoylamino)phenyl]methyl}amino)pyrrolo[1,2-b]pyridazine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WFJ _cell.length_a 47.34 _cell.length_b 75.69 _cell.length_c 88.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 909 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C25 _struct_conn.ptnr2_label_comp_id 9Z4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 9Z4 _struct_conn.ptnr2_auth_seq_id 4000 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.736 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H19 N5 O2' _chem_comp.formula_weight 337.376 _chem_comp.id 9Z4 _chem_comp.mon_nstd_flag . _chem_comp.name 4-({[3-(propanoylamino)phenyl]methyl}amino)pyrrolo[1,2-b]pyridazine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '4-({[3-(acryloylamino)phenyl]methyl}amino)pyrrolo[1,2-b]pyridazine-3-carboxamide bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C23 9Z4 sing 1 n n C18 C17 9Z4 doub 2 n y C18 C19 9Z4 sing 3 n y C17 C16 9Z4 sing 4 n y N21 C19 9Z4 sing 5 n n N21 C22 9Z4 sing 6 n n C23 C22 9Z4 sing 7 n n C19 C20 9Z4 doub 8 n y C22 O24 9Z4 doub 9 n n C16 C15 9Z4 doub 10 n y C20 C15 9Z4 sing 11 n y C15 C14 9Z4 sing 12 n n O12 C10 9Z4 doub 13 n n C14 N13 9Z4 sing 14 n n N13 C6 9Z4 sing 15 n n C10 C5 9Z4 sing 16 n n C10 N11 9Z4 sing 17 n n C6 C5 9Z4 doub 18 n y C6 C1 9Z4 sing 19 n y C7 C1 9Z4 doub 20 n y C7 C8 9Z4 sing 21 n y C5 C4 9Z4 sing 22 n y C1 N2 9Z4 sing 23 n y C8 C9 9Z4 doub 24 n y C4 N3 9Z4 doub 25 n y N2 C9 9Z4 sing 26 n y N2 N3 9Z4 sing 27 n y C4 H1 9Z4 sing 28 n n C7 H2 9Z4 sing 29 n n C8 H3 9Z4 sing 30 n n C9 H4 9Z4 sing 31 n n N11 H5 9Z4 sing 32 n n N11 H6 9Z4 sing 33 n n N13 H7 9Z4 sing 34 n n C14 H8 9Z4 sing 35 n n C14 H9 9Z4 sing 36 n n C16 H10 9Z4 sing 37 n n C17 H11 9Z4 sing 38 n n C18 H12 9Z4 sing 39 n n C20 H13 9Z4 sing 40 n n N21 H14 9Z4 sing 41 n n C23 H15 9Z4 sing 42 n n C23 H16 9Z4 sing 43 n n C25 H17 9Z4 sing 44 n n C25 H18 9Z4 sing 45 n n C25 H19 9Z4 sing 46 n n # _atom_sites.entry_id 5WFJ _atom_sites.fract_transf_matrix[1][1] 0.021124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011242 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9Z4 A 1 4000 4000 9Z4 9Z4 . C 3 HOH A 1 4101 4 HOH HOH . C 3 HOH A 2 4102 2 HOH HOH . C 3 HOH A 3 4103 23 HOH HOH . C 3 HOH A 4 4104 19 HOH HOH . C 3 HOH A 5 4105 12 HOH HOH . C 3 HOH A 6 4106 13 HOH HOH . C 3 HOH A 7 4107 11 HOH HOH . C 3 HOH A 8 4108 15 HOH HOH . C 3 HOH A 9 4109 24 HOH HOH . C 3 HOH A 10 4110 3 HOH HOH . C 3 HOH A 11 4111 5 HOH HOH . C 3 HOH A 12 4112 18 HOH HOH . C 3 HOH A 13 4113 22 HOH HOH . C 3 HOH A 14 4114 9 HOH HOH . C 3 HOH A 15 4115 25 HOH HOH . C 3 HOH A 16 4116 16 HOH HOH . C 3 HOH A 17 4117 8 HOH HOH . C 3 HOH A 18 4118 1 HOH HOH . C 3 HOH A 19 4119 14 HOH HOH . C 3 HOH A 20 4120 7 HOH HOH . C 3 HOH A 21 4121 20 HOH HOH . C 3 HOH A 22 4122 26 HOH HOH . C 3 HOH A 23 4123 17 HOH HOH . C 3 HOH A 24 4124 21 HOH HOH . C 3 HOH A 25 4125 10 HOH HOH . C 3 HOH A 26 4126 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9Z4 . . . B 2 -0.875 -15.546 -3.524 1 41.37 ? C1 9Z4 4000 A 1 HETATM 2 N N2 9Z4 . . . B 2 -2.19 -15.238 -3.226 1 41.06 ? N2 9Z4 4000 A 1 HETATM 3 N N3 9Z4 . . . B 2 -2.729 -13.979 -3.073 1 43.43 ? N3 9Z4 4000 A 1 HETATM 4 C C4 9Z4 . . . B 2 -1.872 -13.026 -3.25 1 44.78 ? C4 9Z4 4000 A 1 HETATM 5 C C5 9Z4 . . . B 2 -0.499 -13.147 -3.583 1 47.15 ? C5 9Z4 4000 A 1 HETATM 6 C C6 9Z4 . . . B 2 0.03 -14.449 -3.72 1 44.94 ? C6 9Z4 4000 A 1 HETATM 7 C C7 9Z4 . . . B 2 -0.794 -16.928 -3.593 1 40.64 ? C7 9Z4 4000 A 1 HETATM 8 C C8 9Z4 . . . B 2 -2.062 -17.44 -3.333 1 40.09 ? C8 9Z4 4000 A 1 HETATM 9 C C9 9Z4 . . . B 2 -2.919 -16.384 -3.114 1 41.85 ? C9 9Z4 4000 A 1 HETATM 10 C C10 9Z4 . . . B 2 0.325 -11.931 -3.834 1 48.4 ? C10 9Z4 4000 A 1 HETATM 11 N N11 9Z4 . . . B 2 -0.192 -10.751 -3.515 1 49.14 ? N11 9Z4 4000 A 1 HETATM 12 O O12 9Z4 . . . B 2 1.448 -12.008 -4.353 1 46.93 ? O12 9Z4 4000 A 1 HETATM 13 N N13 9Z4 . . . B 2 1.328 -14.639 -4.01 1 41.97 ? N13 9Z4 4000 A 1 HETATM 14 C C14 9Z4 . . . B 2 2.147 -15.825 -4.219 1 38.63 ? C14 9Z4 4000 A 1 HETATM 15 C C15 9Z4 . . . B 2 2.07 -16.326 -5.637 1 41.39 ? C15 9Z4 4000 A 1 HETATM 16 C C16 9Z4 . . . B 2 2.124 -15.445 -6.709 1 46.57 ? C16 9Z4 4000 A 1 HETATM 17 C C17 9Z4 . . . B 2 2.011 -15.904 -8.012 1 48.41 ? C17 9Z4 4000 A 1 HETATM 18 C C18 9Z4 . . . B 2 1.843 -17.255 -8.263 1 49.26 ? C18 9Z4 4000 A 1 HETATM 19 C C19 9Z4 . . . B 2 1.802 -18.155 -7.203 1 47.9 ? C19 9Z4 4000 A 1 HETATM 20 C C20 9Z4 . . . B 2 1.916 -17.682 -5.896 1 44.67 ? C20 9Z4 4000 A 1 HETATM 21 N N21 9Z4 . . . B 2 1.672 -19.54 -7.48 1 44.86 ? N21 9Z4 4000 A 1 HETATM 22 C C22 9Z4 . . . B 2 1.064 -20.49 -6.742 1 46.39 ? C22 9Z4 4000 A 1 HETATM 23 C C23 9Z4 . . . B 2 1.054 -21.83 -7.365 1 46.91 ? C23 9Z4 4000 A 1 HETATM 24 O O24 9Z4 . . . B 2 0.532 -20.256 -5.649 1 50.41 ? O24 9Z4 4000 A 1 HETATM 25 C C25 9Z4 . . . B 2 0.185 -21.877 -8.598 1 46.8 ? C25 9Z4 4000 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #