data_5WG5 # _model_server_result.job_id gAOJH856OWCI-sKRdhmDPg _model_server_result.datetime_utc '2025-02-05 08:55:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 5WG5 # _exptl.entry_id 5WG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.38 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-{[(3S,4R)-4-(4-fluorophenyl)piperidin-3-yl]methoxy}-2H-indazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WG5 _cell.length_a 61.022 _cell.length_b 240.13 _cell.length_c 211.611 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O HIS 348 A HIS 348 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc2 A O VAL 366 A VAL 366 1_555 E MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? # _chem_comp.formula 'C19 H20 F N3 O' _chem_comp.formula_weight 325.38 _chem_comp.id ZSO _chem_comp.mon_nstd_flag . _chem_comp.name 5-{[(3S,4R)-4-(4-fluorophenyl)piperidin-3-yl]methoxy}-2H-indazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ZSO doub 376 n y C1 C ZSO sing 377 n y F C ZSO sing 378 n n C2 C3 ZSO sing 379 n y C14 C13 ZSO doub 380 n y C14 C15 ZSO sing 381 n y C C5 ZSO doub 382 n y C13 C12 ZSO sing 383 n y C15 N1 ZSO doub 384 n y C15 C17 ZSO sing 385 n y N1 N2 ZSO sing 386 n y C3 C6 ZSO sing 387 n n C3 C4 ZSO doub 388 n y C12 O ZSO sing 389 n n C12 C18 ZSO doub 390 n y C5 C4 ZSO sing 391 n y O C11 ZSO sing 392 n n C6 C7 ZSO sing 393 n n C6 C10 ZSO sing 394 n n C7 C8 ZSO sing 395 n n C17 C18 ZSO sing 396 n y C17 C16 ZSO doub 397 n y N2 C16 ZSO sing 398 n y C8 N ZSO sing 399 n n C11 C10 ZSO sing 400 n n C10 C9 ZSO sing 401 n n C9 N ZSO sing 402 n n C5 H1 ZSO sing 403 n n C4 H2 ZSO sing 404 n n C2 H3 ZSO sing 405 n n C1 H4 ZSO sing 406 n n C6 H5 ZSO sing 407 n n C10 H6 ZSO sing 408 n n C9 H7 ZSO sing 409 n n C9 H8 ZSO sing 410 n n N H9 ZSO sing 411 n n C8 H11 ZSO sing 412 n n C8 H12 ZSO sing 413 n n C7 H13 ZSO sing 414 n n C7 H14 ZSO sing 415 n n C11 H15 ZSO sing 416 n n C11 H16 ZSO sing 417 n n C18 H17 ZSO sing 418 n n C14 H18 ZSO sing 419 n n C13 H19 ZSO sing 420 n n C16 H20 ZSO sing 421 n n N2 H21 ZSO sing 422 n n # _atom_sites.entry_id 5WG5 _atom_sites.fract_transf_matrix[1][1] 0.016388 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004726 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZSO A 1 701 701 ZSO ZSO . E 5 MG A 1 702 702 MG MG . F 6 HOH A 1 801 803 HOH HOH . F 6 HOH A 2 802 802 HOH HOH . F 6 HOH A 3 803 801 HOH HOH . G 6 HOH B 1 401 104 HOH HOH . G 6 HOH B 2 402 102 HOH HOH . G 6 HOH B 3 403 101 HOH HOH . G 6 HOH B 4 404 103 HOH HOH . G 6 HOH B 5 405 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F ZSO . . . D 4 -14.934 24.732 15.814 1 96.89 ? F ZSO 701 A 1 HETATM 2 C C ZSO . . . D 4 -15.575 25.828 16.252 1 91.3 ? C ZSO 701 A 1 HETATM 3 C C5 ZSO . . . D 4 -15.3 26.336 17.517 1 98.19 ? C5 ZSO 701 A 1 HETATM 4 C C4 ZSO . . . D 4 -15.962 27.472 17.969 1 96.29 ? C4 ZSO 701 A 1 HETATM 5 C C3 ZSO . . . D 4 -16.896 28.099 17.153 1 93.91 ? C3 ZSO 701 A 1 HETATM 6 C C2 ZSO . . . D 4 -17.169 27.591 15.888 1 90.9 ? C2 ZSO 701 A 1 HETATM 7 C C1 ZSO . . . D 4 -16.507 26.456 15.436 1 86.46 ? C1 ZSO 701 A 1 HETATM 8 C C6 ZSO . . . D 4 -17.612 29.308 17.622 1 96.68 ? C6 ZSO 701 A 1 HETATM 9 C C10 ZSO . . . D 4 -18.234 29.046 18.985 1 102.06 ? C10 ZSO 701 A 1 HETATM 10 C C9 ZSO . . . D 4 -18.925 30.307 19.482 1 108.89 ? C9 ZSO 701 A 1 HETATM 11 N N ZSO . . . D 4 -17.964 31.423 19.55 1 105.88 ? N ZSO 701 A 1 HETATM 12 C C8 ZSO . . . D 4 -17.427 31.729 18.211 1 97.31 ? C8 ZSO 701 A 1 HETATM 13 C C7 ZSO . . . D 4 -16.681 30.514 17.671 1 94.31 ? C7 ZSO 701 A 1 HETATM 14 C C11 ZSO . . . D 4 -19.258 27.926 18.881 1 96.36 ? C11 ZSO 701 A 1 HETATM 15 O O ZSO . . . D 4 -19.901 28.04 17.612 1 86.83 ? O ZSO 701 A 1 HETATM 16 C C12 ZSO . . . D 4 -21.127 27.474 17.396 1 75.07 ? C12 ZSO 701 A 1 HETATM 17 C C18 ZSO . . . D 4 -21.502 26.329 18.089 1 59.19 ? C18 ZSO 701 A 1 HETATM 18 C C17 ZSO . . . D 4 -22.752 25.773 17.854 1 54.25 ? C17 ZSO 701 A 1 HETATM 19 C C15 ZSO . . . D 4 -23.612 26.349 16.944 1 54.91 ? C15 ZSO 701 A 1 HETATM 20 C C14 ZSO . . . D 4 -23.246 27.491 16.245 1 55.01 ? C14 ZSO 701 A 1 HETATM 21 C C13 ZSO . . . D 4 -21.995 28.052 16.474 1 75.01 ? C13 ZSO 701 A 1 HETATM 22 C C16 ZSO . . . D 4 -23.312 24.612 18.469 1 55.75 ? C16 ZSO 701 A 1 HETATM 23 N N2 ZSO . . . D 4 -24.532 24.521 17.889 1 61.39 ? N2 ZSO 701 A 1 HETATM 24 N N1 ZSO . . . D 4 -24.712 25.576 16.963 1 55.78 ? N1 ZSO 701 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #