data_5WH8 # _model_server_result.job_id SWQB1ItP6zjnA9UmbaIr0Q _model_server_result.datetime_utc '2024-12-26 11:08:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wh8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":416}' # _entry.id 5WH8 # _exptl.entry_id 5WH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WH8 _cell.length_a 49.21 _cell.length_b 75.5 _cell.length_c 88.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id Q _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 25 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 72 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 316 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 363 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.078 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 264 n n O1 C6 MES sing 265 n n C2 C3 MES sing 266 n n C2 H21 MES sing 267 n n C2 H22 MES sing 268 n n C3 N4 MES sing 269 n n C3 H31 MES sing 270 n n C3 H32 MES sing 271 n n N4 C5 MES sing 272 n n N4 C7 MES sing 273 n n N4 HN4 MES sing 274 n n C5 C6 MES sing 275 n n C5 H51 MES sing 276 n n C5 H52 MES sing 277 n n C6 H61 MES sing 278 n n C6 H62 MES sing 279 n n C7 C8 MES sing 280 n n C7 H71 MES sing 281 n n C7 H72 MES sing 282 n n C8 S MES sing 283 n n C8 H81 MES sing 284 n n C8 H82 MES sing 285 n n S O1S MES doub 286 n n S O2S MES doub 287 n n S O3S MES sing 288 n n # _atom_sites.entry_id 5WH8 _atom_sites.fract_transf_matrix[1][1] 0.020321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 1 EDO EDO . C 2 EDO A 1 402 2 EDO EDO . D 2 EDO A 1 403 3 EDO EDO . E 2 EDO A 1 404 8 EDO EDO . F 2 EDO A 1 405 9 EDO EDO . G 2 EDO A 1 406 10 EDO EDO . H 2 EDO A 1 407 11 EDO EDO . I 2 EDO A 1 408 12 EDO EDO . J 2 EDO A 1 409 13 EDO EDO . K 2 EDO A 1 410 14 EDO EDO . L 2 EDO A 1 411 15 EDO EDO . M 2 EDO A 1 412 16 EDO EDO . N 2 EDO A 1 413 17 EDO EDO . O 3 1PE A 1 414 2 1PE 1PE . P 3 1PE A 1 415 3 1PE 1PE . Q 4 MES A 1 416 1 MES MES . R 5 HOH A 1 501 198 HOH HOH . R 5 HOH A 2 502 27 HOH HOH . R 5 HOH A 3 503 85 HOH HOH . R 5 HOH A 4 504 195 HOH HOH . R 5 HOH A 5 505 98 HOH HOH . R 5 HOH A 6 506 157 HOH HOH . R 5 HOH A 7 507 5 HOH HOH . R 5 HOH A 8 508 192 HOH HOH . R 5 HOH A 9 509 178 HOH HOH . R 5 HOH A 10 510 189 HOH HOH . R 5 HOH A 11 511 220 HOH HOH . R 5 HOH A 12 512 187 HOH HOH . R 5 HOH A 13 513 143 HOH HOH . R 5 HOH A 14 514 162 HOH HOH . R 5 HOH A 15 515 73 HOH HOH . R 5 HOH A 16 516 128 HOH HOH . R 5 HOH A 17 517 237 HOH HOH . R 5 HOH A 18 518 205 HOH HOH . R 5 HOH A 19 519 97 HOH HOH . R 5 HOH A 20 520 226 HOH HOH . R 5 HOH A 21 521 75 HOH HOH . R 5 HOH A 22 522 61 HOH HOH . R 5 HOH A 23 523 69 HOH HOH . R 5 HOH A 24 524 139 HOH HOH . R 5 HOH A 25 525 146 HOH HOH . R 5 HOH A 26 526 196 HOH HOH . R 5 HOH A 27 527 39 HOH HOH . R 5 HOH A 28 528 34 HOH HOH . R 5 HOH A 29 529 111 HOH HOH . R 5 HOH A 30 530 62 HOH HOH . R 5 HOH A 31 531 32 HOH HOH . R 5 HOH A 32 532 80 HOH HOH . R 5 HOH A 33 533 74 HOH HOH . R 5 HOH A 34 534 172 HOH HOH . R 5 HOH A 35 535 72 HOH HOH . R 5 HOH A 36 536 202 HOH HOH . R 5 HOH A 37 537 121 HOH HOH . R 5 HOH A 38 538 102 HOH HOH . R 5 HOH A 39 539 176 HOH HOH . R 5 HOH A 40 540 190 HOH HOH . R 5 HOH A 41 541 228 HOH HOH . R 5 HOH A 42 542 8 HOH HOH . R 5 HOH A 43 543 107 HOH HOH . R 5 HOH A 44 544 45 HOH HOH . R 5 HOH A 45 545 158 HOH HOH . R 5 HOH A 46 546 231 HOH HOH . R 5 HOH A 47 547 58 HOH HOH . R 5 HOH A 48 548 41 HOH HOH . R 5 HOH A 49 549 78 HOH HOH . R 5 HOH A 50 550 225 HOH HOH . R 5 HOH A 51 551 91 HOH HOH . R 5 HOH A 52 552 76 HOH HOH . R 5 HOH A 53 553 184 HOH HOH . R 5 HOH A 54 554 13 HOH HOH . R 5 HOH A 55 555 20 HOH HOH . R 5 HOH A 56 556 108 HOH HOH . R 5 HOH A 57 557 40 HOH HOH . R 5 HOH A 58 558 233 HOH HOH . R 5 HOH A 59 559 10 HOH HOH . R 5 HOH A 60 560 11 HOH HOH . R 5 HOH A 61 561 165 HOH HOH . R 5 HOH A 62 562 120 HOH HOH . R 5 HOH A 63 563 9 HOH HOH . R 5 HOH A 64 564 37 HOH HOH . R 5 HOH A 65 565 218 HOH HOH . R 5 HOH A 66 566 122 HOH HOH . R 5 HOH A 67 567 87 HOH HOH . R 5 HOH A 68 568 100 HOH HOH . R 5 HOH A 69 569 1 HOH HOH . R 5 HOH A 70 570 104 HOH HOH . R 5 HOH A 71 571 3 HOH HOH . R 5 HOH A 72 572 30 HOH HOH . R 5 HOH A 73 573 179 HOH HOH . R 5 HOH A 74 574 14 HOH HOH . R 5 HOH A 75 575 55 HOH HOH . R 5 HOH A 76 576 93 HOH HOH . R 5 HOH A 77 577 6 HOH HOH . R 5 HOH A 78 578 214 HOH HOH . R 5 HOH A 79 579 206 HOH HOH . R 5 HOH A 80 580 163 HOH HOH . R 5 HOH A 81 581 224 HOH HOH . R 5 HOH A 82 582 134 HOH HOH . R 5 HOH A 83 583 129 HOH HOH . R 5 HOH A 84 584 31 HOH HOH . R 5 HOH A 85 585 65 HOH HOH . R 5 HOH A 86 586 18 HOH HOH . R 5 HOH A 87 587 160 HOH HOH . R 5 HOH A 88 588 24 HOH HOH . R 5 HOH A 89 589 22 HOH HOH . R 5 HOH A 90 590 29 HOH HOH . R 5 HOH A 91 591 194 HOH HOH . R 5 HOH A 92 592 2 HOH HOH . R 5 HOH A 93 593 154 HOH HOH . R 5 HOH A 94 594 46 HOH HOH . R 5 HOH A 95 595 130 HOH HOH . R 5 HOH A 96 596 4 HOH HOH . R 5 HOH A 97 597 153 HOH HOH . R 5 HOH A 98 598 161 HOH HOH . R 5 HOH A 99 599 21 HOH HOH . R 5 HOH A 100 600 208 HOH HOH . R 5 HOH A 101 601 28 HOH HOH . R 5 HOH A 102 602 186 HOH HOH . R 5 HOH A 103 603 92 HOH HOH . R 5 HOH A 104 604 215 HOH HOH . R 5 HOH A 105 605 212 HOH HOH . R 5 HOH A 106 606 7 HOH HOH . R 5 HOH A 107 607 50 HOH HOH . R 5 HOH A 108 608 126 HOH HOH . R 5 HOH A 109 609 230 HOH HOH . R 5 HOH A 110 610 232 HOH HOH . R 5 HOH A 111 611 197 HOH HOH . R 5 HOH A 112 612 222 HOH HOH . R 5 HOH A 113 613 140 HOH HOH . R 5 HOH A 114 614 238 HOH HOH . R 5 HOH A 115 615 164 HOH HOH . R 5 HOH A 116 616 36 HOH HOH . R 5 HOH A 117 617 38 HOH HOH . R 5 HOH A 118 618 105 HOH HOH . R 5 HOH A 119 619 56 HOH HOH . R 5 HOH A 120 620 51 HOH HOH . R 5 HOH A 121 621 49 HOH HOH . R 5 HOH A 122 622 48 HOH HOH . R 5 HOH A 123 623 168 HOH HOH . R 5 HOH A 124 624 77 HOH HOH . R 5 HOH A 125 625 59 HOH HOH . R 5 HOH A 126 626 106 HOH HOH . R 5 HOH A 127 627 26 HOH HOH . R 5 HOH A 128 628 200 HOH HOH . R 5 HOH A 129 629 180 HOH HOH . R 5 HOH A 130 630 53 HOH HOH . R 5 HOH A 131 631 229 HOH HOH . R 5 HOH A 132 632 82 HOH HOH . R 5 HOH A 133 633 223 HOH HOH . R 5 HOH A 134 634 240 HOH HOH . R 5 HOH A 135 635 17 HOH HOH . R 5 HOH A 136 636 33 HOH HOH . R 5 HOH A 137 637 227 HOH HOH . R 5 HOH A 138 638 209 HOH HOH . R 5 HOH A 139 639 144 HOH HOH . R 5 HOH A 140 640 145 HOH HOH . R 5 HOH A 141 641 171 HOH HOH . R 5 HOH A 142 642 142 HOH HOH . R 5 HOH A 143 643 119 HOH HOH . R 5 HOH A 144 644 166 HOH HOH . R 5 HOH A 145 645 169 HOH HOH . R 5 HOH A 146 646 141 HOH HOH . R 5 HOH A 147 647 54 HOH HOH . R 5 HOH A 148 648 115 HOH HOH . R 5 HOH A 149 649 90 HOH HOH . R 5 HOH A 150 650 19 HOH HOH . R 5 HOH A 151 651 113 HOH HOH . R 5 HOH A 152 652 110 HOH HOH . R 5 HOH A 153 653 114 HOH HOH . R 5 HOH A 154 654 67 HOH HOH . R 5 HOH A 155 655 64 HOH HOH . R 5 HOH A 156 656 15 HOH HOH . R 5 HOH A 157 657 42 HOH HOH . R 5 HOH A 158 658 175 HOH HOH . R 5 HOH A 159 659 191 HOH HOH . R 5 HOH A 160 660 109 HOH HOH . R 5 HOH A 161 661 183 HOH HOH . R 5 HOH A 162 662 188 HOH HOH . R 5 HOH A 163 663 81 HOH HOH . R 5 HOH A 164 664 16 HOH HOH . R 5 HOH A 165 665 116 HOH HOH . R 5 HOH A 166 666 174 HOH HOH . R 5 HOH A 167 667 236 HOH HOH . R 5 HOH A 168 668 219 HOH HOH . R 5 HOH A 169 669 23 HOH HOH . R 5 HOH A 170 670 118 HOH HOH . R 5 HOH A 171 671 35 HOH HOH . R 5 HOH A 172 672 127 HOH HOH . R 5 HOH A 173 673 63 HOH HOH . R 5 HOH A 174 674 43 HOH HOH . R 5 HOH A 175 675 44 HOH HOH . R 5 HOH A 176 676 235 HOH HOH . R 5 HOH A 177 677 149 HOH HOH . R 5 HOH A 178 678 47 HOH HOH . R 5 HOH A 179 679 96 HOH HOH . R 5 HOH A 180 680 203 HOH HOH . R 5 HOH A 181 681 103 HOH HOH . R 5 HOH A 182 682 68 HOH HOH . R 5 HOH A 183 683 170 HOH HOH . R 5 HOH A 184 684 124 HOH HOH . R 5 HOH A 185 685 66 HOH HOH . R 5 HOH A 186 686 79 HOH HOH . R 5 HOH A 187 687 182 HOH HOH . R 5 HOH A 188 688 177 HOH HOH . R 5 HOH A 189 689 71 HOH HOH . R 5 HOH A 190 690 133 HOH HOH . R 5 HOH A 191 691 216 HOH HOH . R 5 HOH A 192 692 199 HOH HOH . R 5 HOH A 193 693 234 HOH HOH . R 5 HOH A 194 694 156 HOH HOH . R 5 HOH A 195 695 181 HOH HOH . R 5 HOH A 196 696 135 HOH HOH . R 5 HOH A 197 697 217 HOH HOH . R 5 HOH A 198 698 52 HOH HOH . R 5 HOH A 199 699 207 HOH HOH . R 5 HOH A 200 700 88 HOH HOH . R 5 HOH A 201 701 239 HOH HOH . R 5 HOH A 202 702 137 HOH HOH . R 5 HOH A 203 703 210 HOH HOH . R 5 HOH A 204 704 131 HOH HOH . R 5 HOH A 205 705 221 HOH HOH . R 5 HOH A 206 706 167 HOH HOH . R 5 HOH A 207 707 211 HOH HOH . R 5 HOH A 208 708 151 HOH HOH . R 5 HOH A 209 709 95 HOH HOH . R 5 HOH A 210 710 204 HOH HOH . R 5 HOH A 211 711 94 HOH HOH . R 5 HOH A 212 712 112 HOH HOH . R 5 HOH A 213 713 155 HOH HOH . R 5 HOH A 214 714 123 HOH HOH . R 5 HOH A 215 715 99 HOH HOH . R 5 HOH A 216 716 125 HOH HOH . R 5 HOH A 217 717 159 HOH HOH . R 5 HOH A 218 718 185 HOH HOH . R 5 HOH A 219 719 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . Q 4 11.256 45.741 73.344 1 27.38 ? O1 MES 416 A 1 HETATM 2 C C2 MES . . . Q 4 11.857 44.745 72.507 1 25.56 ? C2 MES 416 A 1 HETATM 3 C C3 MES . . . Q 4 12.856 45.342 71.508 1 28.94 ? C3 MES 416 A 1 HETATM 4 N N4 MES . . . Q 4 12.233 46.406 70.723 1 33.71 ? N4 MES 416 A 1 HETATM 5 C C5 MES . . . Q 4 11.644 47.435 71.585 1 28.7 ? C5 MES 416 A 1 HETATM 6 C C6 MES . . . Q 4 10.651 46.767 72.542 1 31.14 ? C6 MES 416 A 1 HETATM 7 C C7 MES . . . Q 4 13.122 46.893 69.64 1 34.13 ? C7 MES 416 A 1 HETATM 8 C C8 MES . . . Q 4 12.313 47.561 68.518 1 36.55 ? C8 MES 416 A 1 HETATM 9 S S MES . . . Q 4 13.278 48.327 67.367 1 38.32 ? S MES 416 A 1 HETATM 10 O O1S MES . . . Q 4 13.802 47.349 66.395 1 21.75 ? O1S MES 416 A 1 HETATM 11 O O2S MES . . . Q 4 12.443 49.292 66.614 1 45.11 ? O2S MES 416 A 1 HETATM 12 O O3S MES . . . Q 4 14.41 49.037 68.009 1 36.85 ? O3S MES 416 A 1 HETATM 13 H H21 MES . . . Q 4 11.072 44.221 71.958 1 30.67 ? H21 MES 416 A 1 HETATM 14 H H22 MES . . . Q 4 12.37 44.01 73.132 1 30.67 ? H22 MES 416 A 1 HETATM 15 H H31 MES . . . Q 4 13.718 45.744 72.044 1 34.73 ? H31 MES 416 A 1 HETATM 16 H H32 MES . . . Q 4 13.223 44.562 70.837 1 34.73 ? H32 MES 416 A 1 HETATM 17 H HN4 MES . . . Q 4 11.453 45.974 70.253 1 40.45 ? HN4 MES 416 A 1 HETATM 18 H H51 MES . . . Q 4 11.137 48.185 70.974 1 34.44 ? H51 MES 416 A 1 HETATM 19 H H52 MES . . . Q 4 12.43 47.94 72.15 1 34.44 ? H52 MES 416 A 1 HETATM 20 H H61 MES . . . Q 4 10.218 47.529 73.193 1 37.37 ? H61 MES 416 A 1 HETATM 21 H H62 MES . . . Q 4 9.83 46.34 71.962 1 37.37 ? H62 MES 416 A 1 HETATM 22 H H71 MES . . . Q 4 13.836 47.611 70.05 1 40.95 ? H71 MES 416 A 1 HETATM 23 H H72 MES . . . Q 4 13.689 46.055 69.23 1 40.95 ? H72 MES 416 A 1 HETATM 24 H H81 MES . . . Q 4 11.701 46.804 68.023 1 43.86 ? H81 MES 416 A 1 HETATM 25 H H82 MES . . . Q 4 11.634 48.294 68.958 1 43.86 ? H82 MES 416 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 25 #