data_5WHC # _model_server_result.job_id 7DhYUmGqTk5xGoPPzm682A _model_server_result.datetime_utc '2025-02-05 14:07:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5whc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5WHC # _exptl.entry_id 5WHC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 259.304 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[3-(1-methylpiperidin-4-yl)-1,2,4-oxadiazol-5-yl]phenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95 _cell.angle_gamma 90 _cell.entry_id 5WHC _cell.length_a 76.292 _cell.length_b 69.279 _cell.length_c 77.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WHC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C14 H17 N3 O2' _chem_comp.formula_weight 259.304 _chem_comp.id AJJ _chem_comp.mon_nstd_flag . _chem_comp.name 4-[3-(1-methylpiperidin-4-yl)-1,2,4-oxadiazol-5-yl]phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 AJJ doub 1 n y C10 C11 AJJ sing 2 n y O1 C11 AJJ sing 3 n n C9 C8 AJJ sing 4 n y C11 C12 AJJ doub 5 n y N1 C7 AJJ doub 6 n y N1 C6 AJJ sing 7 n y C8 C7 AJJ sing 8 n n C8 C13 AJJ doub 9 n y C12 C13 AJJ sing 10 n y C7 O AJJ sing 11 n y C3 C6 AJJ sing 12 n n C3 C2 AJJ sing 13 n n C3 C4 AJJ sing 14 n n C6 N2 AJJ doub 15 n y C2 C1 AJJ sing 16 n n C4 C5 AJJ sing 17 n n O N2 AJJ sing 18 n y C1 N AJJ sing 19 n n C5 N AJJ sing 20 n n N C AJJ sing 21 n n C4 H1 AJJ sing 22 n n C4 H2 AJJ sing 23 n n C5 H3 AJJ sing 24 n n C5 H4 AJJ sing 25 n n C9 H5 AJJ sing 26 n n C10 H6 AJJ sing 27 n n C12 H7 AJJ sing 28 n n C13 H8 AJJ sing 29 n n C H10 AJJ sing 30 n n C H11 AJJ sing 31 n n C H12 AJJ sing 32 n n C1 H13 AJJ sing 33 n n C1 H14 AJJ sing 34 n n C2 H15 AJJ sing 35 n n C2 H16 AJJ sing 36 n n C3 H17 AJJ sing 37 n n O1 H18 AJJ sing 38 n n # _atom_sites.entry_id 5WHC _atom_sites.fract_transf_matrix[1][1] 0.013108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001148 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AJJ A 1 601 1 AJJ XXX . D 3 GOL A 1 602 1 GOL GOL . E 2 AJJ B 1 601 1 AJJ XXX . F 3 GOL B 1 602 2 GOL GOL . G 4 HOH A 1 701 14 HOH HOH . G 4 HOH A 2 702 40 HOH HOH . G 4 HOH A 3 703 17 HOH HOH . G 4 HOH A 4 704 1 HOH HOH . G 4 HOH A 5 705 13 HOH HOH . G 4 HOH A 6 706 10 HOH HOH . G 4 HOH A 7 707 7 HOH HOH . G 4 HOH A 8 708 6 HOH HOH . G 4 HOH A 9 709 25 HOH HOH . G 4 HOH A 10 710 31 HOH HOH . G 4 HOH A 11 711 35 HOH HOH . G 4 HOH A 12 712 2 HOH HOH . G 4 HOH A 13 713 28 HOH HOH . G 4 HOH A 14 714 12 HOH HOH . G 4 HOH A 15 715 19 HOH HOH . G 4 HOH A 16 716 5 HOH HOH . G 4 HOH A 17 717 50 HOH HOH . G 4 HOH A 18 718 8 HOH HOH . G 4 HOH A 19 719 48 HOH HOH . G 4 HOH A 20 720 4 HOH HOH . G 4 HOH A 21 721 38 HOH HOH . G 4 HOH A 22 722 22 HOH HOH . G 4 HOH A 23 723 47 HOH HOH . G 4 HOH A 24 724 52 HOH HOH . G 4 HOH A 25 725 54 HOH HOH . G 4 HOH A 26 726 16 HOH HOH . G 4 HOH A 27 727 46 HOH HOH . G 4 HOH A 28 728 37 HOH HOH . G 4 HOH A 29 729 55 HOH HOH . G 4 HOH A 30 730 49 HOH HOH . G 4 HOH A 31 731 33 HOH HOH . G 4 HOH A 32 732 44 HOH HOH . H 4 HOH B 1 701 32 HOH HOH . H 4 HOH B 2 702 21 HOH HOH . H 4 HOH B 3 703 27 HOH HOH . H 4 HOH B 4 704 9 HOH HOH . H 4 HOH B 5 705 39 HOH HOH . H 4 HOH B 6 706 11 HOH HOH . H 4 HOH B 7 707 23 HOH HOH . H 4 HOH B 8 708 3 HOH HOH . H 4 HOH B 9 709 20 HOH HOH . H 4 HOH B 10 710 30 HOH HOH . H 4 HOH B 11 711 15 HOH HOH . H 4 HOH B 12 712 53 HOH HOH . H 4 HOH B 13 713 18 HOH HOH . H 4 HOH B 14 714 26 HOH HOH . H 4 HOH B 15 715 24 HOH HOH . H 4 HOH B 16 716 42 HOH HOH . H 4 HOH B 17 717 43 HOH HOH . H 4 HOH B 18 718 45 HOH HOH . H 4 HOH B 19 719 29 HOH HOH . H 4 HOH B 20 720 36 HOH HOH . H 4 HOH B 21 721 41 HOH HOH . H 4 HOH B 22 722 34 HOH HOH . H 4 HOH B 23 723 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 AJJ . . . C 2 32.828 3.039 -3.389 0.91 98.58 ? C4 AJJ 601 A 1 HETATM 2 C C5 AJJ . . . C 2 32.618 2.879 -4.892 0.91 98.16 ? C5 AJJ 601 A 1 HETATM 3 C C6 AJJ . . . C 2 31.062 4.771 -2.883 0.91 102.23 ? C6 AJJ 601 A 1 HETATM 4 N N1 AJJ . . . C 2 31.088 5.678 -1.86 0.91 103.53 ? N1 AJJ 601 A 1 HETATM 5 C C7 AJJ . . . C 2 30.589 6.743 -2.405 0.91 100.26 ? C7 AJJ 601 A 1 HETATM 6 C C8 AJJ . . . C 2 30.335 8.045 -1.788 0.91 89.48 ? C8 AJJ 601 A 1 HETATM 7 N N2 AJJ . . . C 2 30.589 5.228 -4.003 0.91 104.33 ? N2 AJJ 601 A 1 HETATM 8 C C9 AJJ . . . C 2 29.769 9.077 -2.527 0.91 85.24 ? C9 AJJ 601 A 1 HETATM 9 C C10 AJJ . . . C 2 29.489 10.297 -1.94 0.91 83.01 ? C10 AJJ 601 A 1 HETATM 10 C C11 AJJ . . . C 2 29.774 10.502 -0.599 0.91 83.89 ? C11 AJJ 601 A 1 HETATM 11 C C12 AJJ . . . C 2 30.351 9.485 0.146 0.91 82.17 ? C12 AJJ 601 A 1 HETATM 12 C C13 AJJ . . . C 2 30.628 8.267 -0.448 0.91 84.99 ? C13 AJJ 601 A 1 HETATM 13 N N AJJ . . . C 2 31.633 1.838 -5.18 0.91 98.79 ? N AJJ 601 A 1 HETATM 14 C C AJJ . . . C 2 32.076 0.536 -4.661 0.91 96.24 ? C AJJ 601 A 1 HETATM 15 O O AJJ . . . C 2 30.26 6.571 -3.694 0.91 102.91 ? O AJJ 601 A 1 HETATM 16 C C1 AJJ . . . C 2 30.344 2.215 -4.606 0.91 99.59 ? C1 AJJ 601 A 1 HETATM 17 C C2 AJJ . . . C 2 30.434 2.346 -3.09 0.91 100.43 ? C2 AJJ 601 A 1 HETATM 18 C C3 AJJ . . . C 2 31.507 3.361 -2.681 0.91 100.09 ? C3 AJJ 601 A 1 HETATM 19 O O1 AJJ . . . C 2 29.47 11.696 -0.01 0.91 84.86 ? O1 AJJ 601 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #