data_5WIE # _model_server_result.job_id PeLuQBgkz2OgPxibE_UxIQ _model_server_result.datetime_utc '2024-11-21 13:54:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":502}' # _entry.id 5WIE # _exptl.entry_id 5WIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WIE _cell.length_a 143.124 _cell.length_b 143.124 _cell.length_c 284.51 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA octameric 8 author_and_software_defined_assembly 1 PISA octameric 8 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N 1 1,2,3,4 C,D,O,P,Q,R,S,T 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 143.124 0 3 'crystal symmetry operation' 3_555 -y+1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 71.562 71.562 0 4 'crystal symmetry operation' 4_455 y-1/2,-x+1/2,z 0 1 0 -1 0 0 0 0 1 -71.562 71.562 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O THR 407 B THR 370 1_555 L K K . B K 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc2 B O THR 407 B THR 370 1_555 L K K . B K 507 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc3 B O THR 407 B THR 370 1_555 M K K . B K 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? metalc ? metalc4 B OG1 THR 407 B THR 370 1_555 M K K . B K 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc5 B O THR 407 B THR 370 1_555 M K K . B K 508 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? metalc ? metalc6 B OG1 THR 407 B THR 370 1_555 M K K . B K 508 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc7 B O VAL 408 B VAL 371 1_555 K K K . B K 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc8 B O VAL 408 B VAL 371 1_555 K K K . B K 506 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc9 B O VAL 408 B VAL 371 1_555 L K K . B K 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc10 B O VAL 408 B VAL 371 1_555 L K K . B K 507 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc11 B O GLY 409 B GLY 372 1_555 K K K . B K 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc12 B O GLY 409 B GLY 372 1_555 K K K . B K 506 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc13 D O THR 407 H THR 370 1_555 S K K . H K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc14 D O THR 407 H THR 370 1_555 S K K . H K 504 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc15 D O THR 407 H THR 370 1_555 T K K . H K 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc16 D OG1 THR 407 H THR 370 1_555 T K K . H K 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc17 D O THR 407 H THR 370 1_555 T K K . H K 505 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc18 D OG1 THR 407 H THR 370 1_555 T K K . H K 505 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc19 D O VAL 408 H VAL 371 1_555 R K K . H K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? metalc ? metalc20 D O VAL 408 H VAL 371 1_555 R K K . H K 503 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? metalc ? metalc21 D O VAL 408 H VAL 371 1_555 S K K . H K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.304 ? metalc ? metalc22 D O VAL 408 H VAL 371 1_555 S K K . H K 504 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.304 ? metalc ? metalc23 D O GLY 409 H GLY 372 1_555 Q K K . H K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.317 ? metalc ? metalc24 D O GLY 409 H GLY 372 1_555 Q K K . H K 502 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 3.317 ? metalc ? metalc25 D O GLY 409 H GLY 372 1_555 R K K . H K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc26 D O GLY 409 H GLY 372 1_555 R K K . H K 503 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc27 D O TYR 410 H TYR 373 1_555 Q K K . H K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc28 D O TYR 410 H TYR 373 1_555 Q K K . H K 502 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WIE _atom_sites.fract_transf_matrix[1][1] 0.006987 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NAP A 1 1001 1001 NAP NAP . F 4 PGW B 1 501 500 PGW PGW . G 4 PGW B 1 502 501 PGW PGW . H 4 PGW B 1 503 502 PGW PGW . I 4 PGW B 1 504 506 PGW PGW . J 4 PGW B 1 505 513 PGW PGW . K 5 K B 1 506 1 K K . L 5 K B 1 507 2 K K . M 5 K B 1 508 3 K K . N 5 K B 1 509 4 K K . O 3 NAP G 1 1001 1001 NAP NAP . P 4 PGW H 1 501 500 PGW PGW . Q 5 K H 1 502 5 K K . R 5 K H 1 503 6 K K . S 5 K H 1 504 7 K K . T 5 K H 1 505 8 K K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 5 _atom_site.Cartn_x 0 _atom_site.Cartn_y 71.562 _atom_site.Cartn_z 326 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 62.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 502 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 456 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #