data_5WIJ # _model_server_result.job_id '_DywCaT16StouWW9RYUQxQ' _model_server_result.datetime_utc '2024-10-11 00:24:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wij # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 5WIJ # _exptl.entry_id 5WIJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.523 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[6-(cyclohexylmethoxy)-7H-purin-2-yl]amino}-N,N-diethylbenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WIJ _cell.length_a 57.423 _cell.length_b 60.961 _cell.length_c 90.561 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H30 N6 O2' _chem_comp.formula_weight 422.523 _chem_comp.id AQG _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[6-(cyclohexylmethoxy)-7H-purin-2-yl]amino}-N,N-diethylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 N7 AQG sing 13 n y C8 N9 AQG doub 14 n y N7 C5 AQG sing 15 n y CAJ CAN AQG sing 16 n n CAJ CAI AQG sing 17 n n CAN CBD AQG sing 18 n n N9 C4 AQG sing 19 n y C5 C4 AQG doub 20 n y C5 C6 AQG sing 21 n y CAI CAK AQG sing 22 n n O6 C6 AQG sing 23 n n O6 CAP AQG sing 24 n n C4 N3 AQG sing 25 n y C6 N1 AQG doub 26 n y CBD CAP AQG sing 27 n n CBD CAO AQG sing 28 n n CAK CAO AQG sing 29 n n N3 C2 AQG doub 30 n y N1 C2 AQG sing 31 n y C2 N2 AQG sing 32 n n N2 CAX AQG sing 33 n n CAE CAX AQG doub 34 n y CAE CAG AQG sing 35 n y CAX CAD AQG sing 36 n y CAG CAY AQG doub 37 n y CAD CAF AQG doub 38 n y CAY CAF AQG sing 39 n y CAY CAW AQG sing 40 n n OAC CAW AQG doub 41 n n CAW NBE AQG sing 42 n n NBE CAL AQG sing 43 n n NBE CAM AQG sing 44 n n CAL CAA AQG sing 45 n n CAM CAB AQG sing 46 n n C8 H1 AQG sing 47 n n N2 H2 AQG sing 48 n n CAA H3 AQG sing 49 n n CAA H4 AQG sing 50 n n CAA H5 AQG sing 51 n n CAB H6 AQG sing 52 n n CAB H7 AQG sing 53 n n CAB H8 AQG sing 54 n n CAD H9 AQG sing 55 n n CAE H10 AQG sing 56 n n CAF H11 AQG sing 57 n n CAG H12 AQG sing 58 n n CAI H13 AQG sing 59 n n CAI H14 AQG sing 60 n n CAJ H15 AQG sing 61 n n CAJ H16 AQG sing 62 n n CAK H17 AQG sing 63 n n CAK H18 AQG sing 64 n n CAL H19 AQG sing 65 n n CAL H20 AQG sing 66 n n CAM H21 AQG sing 67 n n CAM H22 AQG sing 68 n n CAN H23 AQG sing 69 n n CAN H24 AQG sing 70 n n CAO H25 AQG sing 71 n n CAO H26 AQG sing 72 n n CAP H27 AQG sing 73 n n CAP H28 AQG sing 74 n n CBD H29 AQG sing 75 n n N7 H30 AQG sing 76 n n # _atom_sites.entry_id 5WIJ _atom_sites.fract_transf_matrix[1][1] 0.017415 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016404 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AQG A 1 901 1 AQG DRG . C 3 HOH A 1 1001 73 HOH HOH . C 3 HOH A 2 1002 56 HOH HOH . C 3 HOH A 3 1003 88 HOH HOH . C 3 HOH A 4 1004 95 HOH HOH . C 3 HOH A 5 1005 78 HOH HOH . C 3 HOH A 6 1006 33 HOH HOH . C 3 HOH A 7 1007 43 HOH HOH . C 3 HOH A 8 1008 72 HOH HOH . C 3 HOH A 9 1009 2 HOH HOH . C 3 HOH A 10 1010 19 HOH HOH . C 3 HOH A 11 1011 16 HOH HOH . C 3 HOH A 12 1012 4 HOH HOH . C 3 HOH A 13 1013 66 HOH HOH . C 3 HOH A 14 1014 17 HOH HOH . C 3 HOH A 15 1015 13 HOH HOH . C 3 HOH A 16 1016 96 HOH HOH . C 3 HOH A 17 1017 58 HOH HOH . C 3 HOH A 18 1018 101 HOH HOH . C 3 HOH A 19 1019 28 HOH HOH . C 3 HOH A 20 1020 83 HOH HOH . C 3 HOH A 21 1021 53 HOH HOH . C 3 HOH A 22 1022 20 HOH HOH . C 3 HOH A 23 1023 68 HOH HOH . C 3 HOH A 24 1024 10 HOH HOH . C 3 HOH A 25 1025 55 HOH HOH . C 3 HOH A 26 1026 81 HOH HOH . C 3 HOH A 27 1027 25 HOH HOH . C 3 HOH A 28 1028 38 HOH HOH . C 3 HOH A 29 1029 39 HOH HOH . C 3 HOH A 30 1030 94 HOH HOH . C 3 HOH A 31 1031 42 HOH HOH . C 3 HOH A 32 1032 23 HOH HOH . C 3 HOH A 33 1033 15 HOH HOH . C 3 HOH A 34 1034 26 HOH HOH . C 3 HOH A 35 1035 3 HOH HOH . C 3 HOH A 36 1036 103 HOH HOH . C 3 HOH A 37 1037 6 HOH HOH . C 3 HOH A 38 1038 35 HOH HOH . C 3 HOH A 39 1039 60 HOH HOH . C 3 HOH A 40 1040 11 HOH HOH . C 3 HOH A 41 1041 22 HOH HOH . C 3 HOH A 42 1042 14 HOH HOH . C 3 HOH A 43 1043 67 HOH HOH . C 3 HOH A 44 1044 7 HOH HOH . C 3 HOH A 45 1045 47 HOH HOH . C 3 HOH A 46 1046 65 HOH HOH . C 3 HOH A 47 1047 64 HOH HOH . C 3 HOH A 48 1048 92 HOH HOH . C 3 HOH A 49 1049 57 HOH HOH . C 3 HOH A 50 1050 12 HOH HOH . C 3 HOH A 51 1051 45 HOH HOH . C 3 HOH A 52 1052 18 HOH HOH . C 3 HOH A 53 1053 8 HOH HOH . C 3 HOH A 54 1054 5 HOH HOH . C 3 HOH A 55 1055 1 HOH HOH . C 3 HOH A 56 1056 29 HOH HOH . C 3 HOH A 57 1057 82 HOH HOH . C 3 HOH A 58 1058 21 HOH HOH . C 3 HOH A 59 1059 9 HOH HOH . C 3 HOH A 60 1060 32 HOH HOH . C 3 HOH A 61 1061 24 HOH HOH . C 3 HOH A 62 1062 93 HOH HOH . C 3 HOH A 63 1063 37 HOH HOH . C 3 HOH A 64 1064 102 HOH HOH . C 3 HOH A 65 1065 61 HOH HOH . C 3 HOH A 66 1066 31 HOH HOH . C 3 HOH A 67 1067 90 HOH HOH . C 3 HOH A 68 1068 99 HOH HOH . C 3 HOH A 69 1069 41 HOH HOH . C 3 HOH A 70 1070 100 HOH HOH . C 3 HOH A 71 1071 51 HOH HOH . C 3 HOH A 72 1072 71 HOH HOH . C 3 HOH A 73 1073 46 HOH HOH . C 3 HOH A 74 1074 48 HOH HOH . C 3 HOH A 75 1075 75 HOH HOH . C 3 HOH A 76 1076 79 HOH HOH . C 3 HOH A 77 1077 54 HOH HOH . C 3 HOH A 78 1078 27 HOH HOH . C 3 HOH A 79 1079 52 HOH HOH . C 3 HOH A 80 1080 77 HOH HOH . C 3 HOH A 81 1081 76 HOH HOH . C 3 HOH A 82 1082 63 HOH HOH . C 3 HOH A 83 1083 70 HOH HOH . C 3 HOH A 84 1084 50 HOH HOH . C 3 HOH A 85 1085 80 HOH HOH . C 3 HOH A 86 1086 62 HOH HOH . C 3 HOH A 87 1087 40 HOH HOH . C 3 HOH A 88 1088 69 HOH HOH . C 3 HOH A 89 1089 74 HOH HOH . C 3 HOH A 90 1090 84 HOH HOH . C 3 HOH A 91 1091 44 HOH HOH . C 3 HOH A 92 1092 30 HOH HOH . C 3 HOH A 93 1093 91 HOH HOH . C 3 HOH A 94 1094 59 HOH HOH . C 3 HOH A 95 1095 36 HOH HOH . C 3 HOH A 96 1096 49 HOH HOH . C 3 HOH A 97 1097 34 HOH HOH . C 3 HOH A 98 1098 86 HOH HOH . C 3 HOH A 99 1099 89 HOH HOH . C 3 HOH A 100 1100 98 HOH HOH . C 3 HOH A 101 1101 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 AQG . . . B 2 -0.642 -5.129 0.586 1 26.55 ? C4 AQG 901 A 1 HETATM 2 C C5 AQG . . . B 2 -1.866 -5.387 -0.001 1 30.42 ? C5 AQG 901 A 1 HETATM 3 C C6 AQG . . . B 2 -2.813 -6.189 0.705 1 38.91 ? C6 AQG 901 A 1 HETATM 4 C C8 AQG . . . B 2 -0.661 -4.135 -1.357 1 39.48 ? C8 AQG 901 A 1 HETATM 5 N N1 AQG . . . B 2 -2.476 -6.659 1.916 1 31.79 ? N1 AQG 901 A 1 HETATM 6 N N2 AQG . . . B 2 -0.9 -6.908 3.803 1 37.26 ? N2 AQG 901 A 1 HETATM 7 N N3 AQG . . . B 2 -0.381 -5.649 1.825 1 35.58 ? N3 AQG 901 A 1 HETATM 8 C C2 AQG . . . B 2 -1.277 -6.397 2.461 1 34.1 ? C2 AQG 901 A 1 HETATM 9 C CAA AQG . . . B 2 -3.35 -8.791 9.774 1 48.9 ? CAA AQG 901 A 1 HETATM 10 C CAB AQG . . . B 2 -3.639 -12.367 10.106 1 61.51 ? CAB AQG 901 A 1 HETATM 11 C CAD AQG . . . B 2 -1.149 -8.15 5.898 1 40.41 ? CAD AQG 901 A 1 HETATM 12 C CAE AQG . . . B 2 -2.605 -8.774 4.089 1 42.11 ? CAE AQG 901 A 1 HETATM 13 C CAF AQG . . . B 2 -1.723 -9.125 6.709 1 45.97 ? CAF AQG 901 A 1 HETATM 14 C CAG AQG . . . B 2 -3.19 -9.754 4.907 1 45.13 ? CAG AQG 901 A 1 HETATM 15 C CAI AQG . . . B 2 -6.843 -10.712 0.064 1 54.16 ? CAI AQG 901 A 1 HETATM 16 C CAJ AQG . . . B 2 -6.272 -9.909 -1.103 1 56.5 ? CAJ AQG 901 A 1 HETATM 17 C CAK AQG . . . B 2 -7.468 -9.795 1.106 1 63.98 ? CAK AQG 901 A 1 HETATM 18 C CAL AQG . . . B 2 -4.393 -9.271 8.759 1 49.7 ? CAL AQG 901 A 1 HETATM 19 C CAM AQG . . . B 2 -4.722 -11.761 9.188 1 53.22 ? CAM AQG 901 A 1 HETATM 20 C CAN AQG . . . B 2 -5.651 -8.576 -0.683 1 52.39 ? CAN AQG 901 A 1 HETATM 21 C CAO AQG . . . B 2 -6.411 -8.912 1.765 1 54.97 ? CAO AQG 901 A 1 HETATM 22 C CAP AQG . . . B 2 -5.033 -6.952 1.097 1 52.62 ? CAP AQG 901 A 1 HETATM 23 C CAW AQG . . . B 2 -3.385 -11.012 7.137 1 49.63 ? CAW AQG 901 A 1 HETATM 24 C CAX AQG . . . B 2 -1.575 -7.967 4.59 1 38.11 ? CAX AQG 901 A 1 HETATM 25 C CAY AQG . . . B 2 -2.758 -9.924 6.215 1 49.17 ? CAY AQG 901 A 1 HETATM 26 C CBD AQG . . . B 2 -5.31 -8.448 0.807 1 50.32 ? CBD AQG 901 A 1 HETATM 27 N N7 AQG . . . B 2 -1.838 -4.751 -1.209 1 35.6 ? N7 AQG 901 A 1 HETATM 28 N N9 AQG . . . B 2 0.084 -4.352 -0.275 1 33.95 ? N9 AQG 901 A 1 HETATM 29 N NBE AQG . . . B 2 -4.16 -10.665 8.361 1 49.91 ? NBE AQG 901 A 1 HETATM 30 O O6 AQG . . . B 2 -4.093 -6.483 0.139 1 46.65 ? O6 AQG 901 A 1 HETATM 31 O OAC AQG . . . B 2 -3.229 -12.147 6.861 1 50.7 ? OAC AQG 901 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #