data_5WIO # _model_server_result.job_id TKKk9RcZfVrDUtjiT25jew _model_server_result.datetime_utc '2024-11-27 17:29:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 5WIO # _exptl.entry_id 5WIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 188.183 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(1H-pyrrol-1-yl)pyridine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WIO _cell.length_a 112.911 _cell.length_b 125.535 _cell.length_c 110.453 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F 1 1 B,C,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H8 N2 O2' _chem_comp.formula_weight 188.183 _chem_comp.id XXE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(1H-pyrrol-1-yl)pyridine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ NAI XXE doub 363 n y CAJ CAK XXE sing 364 n y NAI CAH XXE sing 365 n y CAK CAF XXE doub 366 n y CAH CAG XXE doub 367 n y CAH CAL XXE sing 368 n n CAF CAG XXE sing 369 n y CAF NAA XXE sing 370 n n OAM CAL XXE doub 371 n n CAE NAA XXE sing 372 n y CAE CAD XXE doub 373 n y CAL OAN XXE sing 374 n n NAA CAB XXE sing 375 n y CAD CAC XXE sing 376 n y CAB CAC XXE doub 377 n y OAN H1 XXE sing 378 n n CAG HAG XXE sing 379 n n CAJ HAJ XXE sing 380 n n CAK HAK XXE sing 381 n n CAB HAB XXE sing 382 n n CAC HAC XXE sing 383 n n CAD HAD XXE sing 384 n n CAE HAE XXE sing 385 n n # _atom_sites.entry_id 5WIO _atom_sites.fract_transf_matrix[1][1] 0.008857 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007966 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 XXE A 1 301 301 XXE XXE . F 3 HOH A 1 401 401 HOH HOH . F 3 HOH A 2 402 402 HOH HOH . F 3 HOH A 3 403 403 HOH HOH . F 3 HOH A 4 404 404 HOH HOH . F 3 HOH A 5 405 405 HOH HOH . G 3 HOH B 1 301 301 HOH HOH . G 3 HOH B 2 302 302 HOH HOH . G 3 HOH B 3 303 303 HOH HOH . G 3 HOH B 4 304 304 HOH HOH . G 3 HOH B 5 305 305 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAM XXE . . . E 2 39.049 14.738 3.58 1 76.85 ? OAM XXE 301 A 1 HETATM 2 C CAL XXE . . . E 2 38.201 14.043 4.199 1 71.4 ? CAL XXE 301 A 1 HETATM 3 O OAN XXE . . . E 2 38.371 13.784 5.419 1 61.86 ? OAN XXE 301 A 1 HETATM 4 C CAH XXE . . . E 2 36.977 13.522 3.477 1 75.87 ? CAH XXE 301 A 1 HETATM 5 C CAG XXE . . . E 2 35.789 13.335 4.167 1 66.73 ? CAG XXE 301 A 1 HETATM 6 N NAI XXE . . . E 2 37.045 13.239 2.145 0.95 81.95 ? NAI XXE 301 A 1 HETATM 7 C CAJ XXE . . . E 2 35.947 12.769 1.489 1 68.81 ? CAJ XXE 301 A 1 HETATM 8 C CAK XXE . . . E 2 34.761 12.579 2.178 1 69.79 ? CAK XXE 301 A 1 HETATM 9 C CAF XXE . . . E 2 34.693 12.863 3.512 1 69.43 ? CAF XXE 301 A 1 HETATM 10 N NAA XXE . . . E 2 33.475 12.666 4.212 0.95 67.77 ? NAA XXE 301 A 1 HETATM 11 C CAB XXE . . . E 2 33.345 12.158 5.511 0.9 60.71 ? CAB XXE 301 A 1 HETATM 12 C CAC XXE . . . E 2 31.988 12.119 5.82 1 61.32 ? CAC XXE 301 A 1 HETATM 13 C CAD XXE . . . E 2 31.272 12.603 4.71 0.8 68.76 ? CAD XXE 301 A 1 HETATM 14 C CAE XXE . . . E 2 32.19 12.938 3.722 0.85 68.97 ? CAE XXE 301 A 1 HETATM 15 H HAG XXE . . . E 2 35.74 13.536 5.121 1 80.07 ? HAG XXE 301 A 1 HETATM 16 H HAJ XXE . . . E 2 35.997 12.566 0.536 1 82.58 ? HAJ XXE 301 A 1 HETATM 17 H HAK XXE . . . E 2 33.973 12.243 1.71 1 83.75 ? HAK XXE 301 A 1 HETATM 18 H HAB XXE . . . E 2 34.075 11.881 6.095 1 72.85 ? HAB XXE 301 A 1 HETATM 19 H HAC XXE . . . E 2 31.601 11.811 6.661 1 73.58 ? HAC XXE 301 A 1 HETATM 20 H HAD XXE . . . E 2 30.302 12.689 4.646 1 82.51 ? HAD XXE 301 A 1 HETATM 21 H HAE XXE . . . E 2 31.977 13.3 2.84 1 82.76 ? HAE XXE 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 44 _model_server_stats.element_count 21 #