data_5WIW # _model_server_result.job_id q-XEf-h0KbxnyI7K3ntQyg _model_server_result.datetime_utc '2024-10-12 23:28:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wiw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 5WIW # _exptl.entry_id 5WIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WIW _cell.length_a 66.639 _cell.length_b 66.639 _cell.length_c 82.184 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,J 1 1 B,C,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 H N N ? 5 I N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 2 4 3 MAN BMA C1 O1 . O3 HO3 . sing 4 ? 2 5 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG B 500 NAG 2 n C NAG 2 C 2 NAG B 501 NAG 2 n C BMA 3 C 3 BMA B 502 BMA 2 n C MAN 4 C 4 MAN B 503 MAN 2 n C FUC 5 C 5 FUC B 499 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 47 1_555 A SG CYS 40 A CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 43 A CYS 64 1_555 A SG CYS 56 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 46 A CYS 67 1_555 A SG CYS 64 A CYS 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 66 A CYS 87 1_555 A SG CYS 80 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 A SG CYS 72 A CYS 93 1_555 A SG CYS 77 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 A SG CYS 84 A CYS 105 1_555 A SG CYS 95 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf7 A SG CYS 98 A CYS 119 1_555 A SG CYS 112 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf8 A SG CYS 118 A CYS 139 1_555 A SG CYS 137 A CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf9 B SG CYS 26 B CYS 47 1_555 B SG CYS 40 B CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf10 B SG CYS 43 B CYS 64 1_555 B SG CYS 56 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf11 B SG CYS 46 B CYS 67 1_555 B SG CYS 64 B CYS 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 B SG CYS 66 B CYS 87 1_555 B SG CYS 80 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf13 B SG CYS 72 B CYS 93 1_555 B SG CYS 77 B CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf14 B SG CYS 84 B CYS 105 1_555 B SG CYS 95 B CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf15 B SG CYS 98 B CYS 119 1_555 B SG CYS 112 B CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf16 B SG CYS 118 B CYS 139 1_555 B SG CYS 137 B CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A ND2 ASN 117 A ASN 138 1_555 D C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale2 B ND2 ASN 117 B ASN 138 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale4 C O6 NAG . C NAG 1 1_555 C C1 FUC . C FUC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale5 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale6 C O3 BMA . C BMA 3 1_555 C C1 MAN . C MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 385 n n S O2 SO4 doub 386 n n S O3 SO4 sing 387 n n S O4 SO4 sing 388 n n # _atom_sites.entry_id 5WIW _atom_sites.fract_transf_matrix[1][1] 0.015006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG A 1 201 602 NAG NAG . E 4 GOL A 1 202 601 GOL GOL . F 5 SO4 A 1 203 2 SO4 SO4 . G 4 GOL B 1 206 601 GOL GOL . H 5 SO4 B 1 207 1 SO4 SO4 . I 5 SO4 B 1 208 3 SO4 SO4 . J 6 HOH A 1 301 84 HOH HOH . J 6 HOH A 2 302 136 HOH HOH . J 6 HOH A 3 303 154 HOH HOH . J 6 HOH A 4 304 2 HOH HOH . J 6 HOH A 5 305 60 HOH HOH . J 6 HOH A 6 306 68 HOH HOH . J 6 HOH A 7 307 126 HOH HOH . J 6 HOH A 8 308 1 HOH HOH . J 6 HOH A 9 309 9 HOH HOH . J 6 HOH A 10 310 55 HOH HOH . J 6 HOH A 11 311 116 HOH HOH . J 6 HOH A 12 312 24 HOH HOH . J 6 HOH A 13 313 53 HOH HOH . J 6 HOH A 14 314 155 HOH HOH . J 6 HOH A 15 315 143 HOH HOH . J 6 HOH A 16 316 17 HOH HOH . J 6 HOH A 17 317 4 HOH HOH . J 6 HOH A 18 318 123 HOH HOH . J 6 HOH A 19 319 19 HOH HOH . J 6 HOH A 20 320 89 HOH HOH . J 6 HOH A 21 321 74 HOH HOH . J 6 HOH A 22 322 36 HOH HOH . J 6 HOH A 23 323 77 HOH HOH . J 6 HOH A 24 324 49 HOH HOH . J 6 HOH A 25 325 134 HOH HOH . J 6 HOH A 26 326 34 HOH HOH . J 6 HOH A 27 327 152 HOH HOH . J 6 HOH A 28 328 133 HOH HOH . J 6 HOH A 29 329 80 HOH HOH . J 6 HOH A 30 330 69 HOH HOH . J 6 HOH A 31 331 115 HOH HOH . J 6 HOH A 32 332 28 HOH HOH . J 6 HOH A 33 333 14 HOH HOH . J 6 HOH A 34 334 125 HOH HOH . J 6 HOH A 35 335 159 HOH HOH . J 6 HOH A 36 336 131 HOH HOH . J 6 HOH A 37 337 7 HOH HOH . J 6 HOH A 38 338 102 HOH HOH . J 6 HOH A 39 339 119 HOH HOH . J 6 HOH A 40 340 151 HOH HOH . J 6 HOH A 41 341 65 HOH HOH . J 6 HOH A 42 342 97 HOH HOH . J 6 HOH A 43 343 76 HOH HOH . J 6 HOH A 44 344 81 HOH HOH . J 6 HOH A 45 345 140 HOH HOH . J 6 HOH A 46 346 32 HOH HOH . J 6 HOH A 47 347 130 HOH HOH . J 6 HOH A 48 348 33 HOH HOH . J 6 HOH A 49 349 58 HOH HOH . J 6 HOH A 50 350 111 HOH HOH . J 6 HOH A 51 351 104 HOH HOH . J 6 HOH A 52 352 108 HOH HOH . J 6 HOH A 53 353 148 HOH HOH . J 6 HOH A 54 354 22 HOH HOH . J 6 HOH A 55 355 27 HOH HOH . J 6 HOH A 56 356 113 HOH HOH . J 6 HOH A 57 357 71 HOH HOH . J 6 HOH A 58 358 145 HOH HOH . K 6 HOH B 1 301 142 HOH HOH . K 6 HOH B 2 302 150 HOH HOH . K 6 HOH B 3 303 8 HOH HOH . K 6 HOH B 4 304 138 HOH HOH . K 6 HOH B 5 305 75 HOH HOH . K 6 HOH B 6 306 47 HOH HOH . K 6 HOH B 7 307 121 HOH HOH . K 6 HOH B 8 308 86 HOH HOH . K 6 HOH B 9 309 31 HOH HOH . K 6 HOH B 10 310 54 HOH HOH . K 6 HOH B 11 311 41 HOH HOH . K 6 HOH B 12 312 61 HOH HOH . K 6 HOH B 13 313 18 HOH HOH . K 6 HOH B 14 314 124 HOH HOH . K 6 HOH B 15 315 144 HOH HOH . K 6 HOH B 16 316 91 HOH HOH . K 6 HOH B 17 317 149 HOH HOH . K 6 HOH B 18 318 72 HOH HOH . K 6 HOH B 19 319 103 HOH HOH . K 6 HOH B 20 320 122 HOH HOH . K 6 HOH B 21 321 29 HOH HOH . K 6 HOH B 22 322 107 HOH HOH . K 6 HOH B 23 323 39 HOH HOH . K 6 HOH B 24 324 15 HOH HOH . K 6 HOH B 25 325 137 HOH HOH . K 6 HOH B 26 326 153 HOH HOH . K 6 HOH B 27 327 160 HOH HOH . K 6 HOH B 28 328 147 HOH HOH . K 6 HOH B 29 329 158 HOH HOH . K 6 HOH B 30 330 157 HOH HOH . K 6 HOH B 31 331 35 HOH HOH . K 6 HOH B 32 332 82 HOH HOH . K 6 HOH B 33 333 37 HOH HOH . K 6 HOH B 34 334 78 HOH HOH . K 6 HOH B 35 335 139 HOH HOH . K 6 HOH B 36 336 93 HOH HOH . K 6 HOH B 37 337 120 HOH HOH . K 6 HOH B 38 338 94 HOH HOH . K 6 HOH B 39 339 16 HOH HOH . K 6 HOH B 40 340 46 HOH HOH . K 6 HOH B 41 341 83 HOH HOH . K 6 HOH B 42 342 161 HOH HOH . K 6 HOH B 43 343 26 HOH HOH . K 6 HOH B 44 344 114 HOH HOH . K 6 HOH B 45 345 95 HOH HOH . K 6 HOH B 46 346 96 HOH HOH . K 6 HOH B 47 347 62 HOH HOH . K 6 HOH B 48 348 105 HOH HOH . K 6 HOH B 49 349 12 HOH HOH . K 6 HOH B 50 350 11 HOH HOH . K 6 HOH B 51 351 141 HOH HOH . K 6 HOH B 52 352 156 HOH HOH . K 6 HOH B 53 353 100 HOH HOH . K 6 HOH B 54 354 90 HOH HOH . K 6 HOH B 55 355 146 HOH HOH . K 6 HOH B 56 356 110 HOH HOH . K 6 HOH B 57 357 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 5 80.558 132.402 1.972 1 103.43 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . F 5 81.746 133.276 1.842 1 100.85 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . F 5 79.963 132.171 0.635 1 100.56 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . F 5 79.564 133.057 2.852 1 101.9 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . F 5 80.959 131.107 2.567 1 100.1 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #