data_5WJM # _model_server_result.job_id 9ndU1KD1YtI2kLmjmYmJAw _model_server_result.datetime_utc '2024-11-05 00:57:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5wjm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2007}' # _entry.id 5WJM # _exptl.entry_id 5WJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5WJM _cell.length_a 122.476 _cell.length_b 122.476 _cell.length_c 43.603 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5WJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 2 A ASP 1716 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc2 A O ASN 3 A ASN 1717 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc3 A OE1 GLU 19 A GLU 1733 1_555 C CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc4 A OE2 GLU 19 A GLU 1733 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc5 A OD1 ASP 33 A ASP 1747 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc6 A OD2 ASP 33 A ASP 1747 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc7 A OD2 ASP 35 A ASP 1749 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc8 A O ASN 39 A ASN 1753 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc9 A OD1 ASP 73 A ASP 1787 1_555 C CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc10 A OE2 GLU 75 A GLU 1789 1_555 C CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc11 A OE1 GLU 75 A GLU 1789 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc12 A OE2 GLU 75 A GLU 1789 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.165 ? metalc ? metalc13 A OD2 ASP 88 A ASP 1802 1_555 B CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc14 A OD1 ASP 106 A ASP 1820 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc15 A O ILE 107 A ILE 1821 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc16 A OD1 ASN 108 A ASN 1822 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc17 A OD2 ASP 109 A ASP 1823 1_555 C CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc18 A OD1 ASP 109 A ASP 1823 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc19 A O ASN 110 A ASN 1824 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc20 A OE2 GLU 125 A GLU 1839 1_555 F CA CA . A CA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc21 A OE1 GLU 125 A GLU 1839 1_555 G CA CA . A CA 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc22 A OD1 ASP 140 A ASP 1854 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc23 A OD2 ASP 140 A ASP 1854 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc24 A OD1 ASP 142 A ASP 1856 1_555 D CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc25 A OD2 ASP 142 A ASP 1856 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc26 A O ASN 146 A ASN 1860 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc27 A OD1 ASP 178 A ASP 1892 1_555 G CA CA . A CA 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc28 A OE1 GLU 180 A GLU 1894 1_555 F CA CA . A CA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc29 A OE2 GLU 180 A GLU 1894 1_555 G CA CA . A CA 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.974 ? metalc ? metalc30 A OD2 ASP 193 A ASP 1907 1_555 E CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc31 A OD1 ASP 204 A ASP 1918 1_555 H K K . A K 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc32 A OD2 ASP 204 A ASP 1918 1_555 H K K . A K 2007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc33 A OD1 ASP 214 A ASP 1928 1_555 F CA CA . A CA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc34 A O GLU 215 A GLU 1929 1_555 F CA CA . A CA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc35 A OD1 ASP 217 A ASP 1931 1_555 F CA CA . A CA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc36 A OD2 ASP 217 A ASP 1931 1_555 G CA CA . A CA 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5WJM _atom_sites.fract_transf_matrix[1][1] 0.008165 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008165 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 2001 1 CA CA . C 2 CA A 1 2002 2 CA CA . D 2 CA A 1 2003 3 CA CA . E 2 CA A 1 2004 4 CA CA . F 2 CA A 1 2005 5 CA CA . G 2 CA A 1 2006 6 CA CA . H 3 K A 1 2007 1 K K . I 4 MPD A 1 2008 1 MPD MPD . J 4 MPD A 1 2009 2 MPD MPD . K 5 HOH A 1 2101 19 HOH HOH . K 5 HOH A 2 2102 24 HOH HOH . K 5 HOH A 3 2103 38 HOH HOH . K 5 HOH A 4 2104 1 HOH HOH . K 5 HOH A 5 2105 31 HOH HOH . K 5 HOH A 6 2106 28 HOH HOH . K 5 HOH A 7 2107 8 HOH HOH . K 5 HOH A 8 2108 3 HOH HOH . K 5 HOH A 9 2109 40 HOH HOH . K 5 HOH A 10 2110 7 HOH HOH . K 5 HOH A 11 2111 4 HOH HOH . K 5 HOH A 12 2112 23 HOH HOH . K 5 HOH A 13 2113 25 HOH HOH . K 5 HOH A 14 2114 13 HOH HOH . K 5 HOH A 15 2115 32 HOH HOH . K 5 HOH A 16 2116 15 HOH HOH . K 5 HOH A 17 2117 2 HOH HOH . K 5 HOH A 18 2118 29 HOH HOH . K 5 HOH A 19 2119 17 HOH HOH . K 5 HOH A 20 2120 34 HOH HOH . K 5 HOH A 21 2121 33 HOH HOH . K 5 HOH A 22 2122 27 HOH HOH . K 5 HOH A 23 2123 16 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.771 _atom_site.Cartn_y -19.133 _atom_site.Cartn_z -8.57 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 2007 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #